Escherichia fergusonii: EFER_3239
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Entry
EFER_3239 CDS
T00811
Symbol
dusB
Name
(GenBank) tRNA-dihydrouridine synthase B
KO
K05540
tRNA-dihydrouridine synthase B [EC:1.-.-.-]
Organism
efe
Escherichia fergusonii
Brite
KEGG Orthology (KO) [BR:
efe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
efe03016
]
EFER_3239 (dusB)
Transfer RNA biogenesis [BR:
efe03016
]
Prokaryotic type
tRNA modification factors
Dihydorouridine synthases
EFER_3239 (dusB)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Dus
His_biosynth
DHO_dh
NanE
PEP_mutase
NMO
Pterin_bind
DeoC
Motif
Other DBs
NCBI-ProteinID:
CAQ90731
UniProt:
B7LRN5
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All DBs
Position
3326458..3327423
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AA seq
321 aa
AA seq
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MRIGQYQLRNRLIAAPMAGITDRPFRTLCYEMGAGLTVSEMMSSNPQVWESDKSRLRMVH
IDEPGIRTVQIAGSDPKEMADAARINVESGAQIIDINMGCPAKKVNRKLAGSALLQYPDV
VKSILTEVVNAVDVPVTLKIRTGWAPEHRNCEEIAQLAEDCGIQALTIHGRTRACLFNGE
AEYDSIRAVKQKVSIPVIANGDITDPLKARAVLDYTGADALMIGRAAQGRPWIFREIQHY
LDTGELLPPLPLAEVKRLLCAHVRELHDFYGPAKGYRIARKHVSWYLQEHAPNDQFRRTF
NAIEDASEQLEALEAYFENFA
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atgcgcatcggacaatatcagctcagaaatcgcctgatcgcagcgcccatggctggcatt
acagacagaccttttcggacgttgtgctacgagatgggagccggattgacagtatccgag
atgatgtcttctaacccacaggtttgggaaagcgacaaatctcgtttacggatggtgcac
attgatgaacccggtattcgcaccgtgcaaattgccggtagcgatcctaaagaaatggca
gatgcagcacgtattaacgtggaaagcggtgcccagattattgatatcaatatgggttgc
ccggctaaaaaagtgaatcgcaagctcgcaggttcagccctcttgcagtacccggatgtc
gttaaatcgattcttaccgaggtcgtcaatgcagtggacgttcctgttaccctgaagatt
cgcaccggctgggcgccggaacaccgtaactgcgaagagattgcccaactggctgaagac
tgtggcattcaggctctgaccattcatggccgtacacgcgcctgtttgttcaatggagaa
gctgaatacgacagtattcgggcagttaagcagaaagtttccattccggttatcgcgaat
ggcgacattactgacccgcttaaagccagagctgtgctcgactatacaggggcggatgcc
ctgatgataggccgcgcagctcagggaagaccctggatctttcgggaaatccagcattat
ctggacactggggagttgctgcccccgctgcctttggcagaggttaagcgcttgctttgc
gcgcacgttcgggaactgcatgacttttatggtccggcaaaagggtaccgaattgcacgt
aaacacgtttcctggtatctccaggaacacgctccaaatgaccagtttcggcgcacattc
aacgccattgaggatgccagcgaacagctggaggcgttggaggcatacttcgaaaatttt
gcgtaa
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