Duffyella gerundensis: EM595_0238
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Entry
EM595_0238 CDS
T04258
Symbol
hemB
Name
(GenBank) 5-aminolevulinate dehydratase
KO
K01698
porphobilinogen synthase [EC:
4.2.1.24
]
Organism
ege
Duffyella gerundensis
Pathway
ege00860
Porphyrin metabolism
ege01100
Metabolic pathways
ege01110
Biosynthesis of secondary metabolites
ege01120
Microbial metabolism in diverse environments
ege01240
Biosynthesis of cofactors
Module
ege_M00121
Heme biosynthesis, plants and bacteria, glutamate => heme
ege_M00846
Siroheme biosynthesis, glutamyl-tRNA => siroheme
Brite
KEGG Orthology (KO) [BR:
ege00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
EM595_0238 (hemB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ege04147
]
EM595_0238 (hemB)
Enzymes [BR:
ege01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.24 porphobilinogen synthase
EM595_0238 (hemB)
Exosome [BR:
ege04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
EM595_0238 (hemB)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ALAD
Motif
Other DBs
NCBI-ProteinID:
CUU22475
UniProt:
A0A0U5KZZ8
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All DBs
Position
1:complement(259018..259995)
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AA seq
325 aa
AA seq
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MSEYSPVLRPRRLRKTPSLRAMFQESELSLNDLALPIFVEEGVDDYKAIEAMPGVMRIPE
KRLAYEIERIAKAGIRSVMTFGISHHTDATGSDAWQENGLVARMSRICKETVPEMIVMSD
TCFCEYTSHGHCGVLCGHGVDNDATLINLGKQAVVAAHAGADFIAPSAAMDGQVAAIRQA
LDAAGFTDTAIMSYSTKFASSFYGPFREAAGTALKGDRKTYQMNPMNRREAIRESLIDAA
EGADSLMVKPAGAYLDILRDIRERSDLPLAAYQVSGEYAMIKFAAQAGAIDERNVVLESL
GAIKRAGADVIFSYFALDLAENKVL
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaatattcccctgttttgcgcccaagaagattgcgtaaaaccccttcgctgcgc
gcgatgttccaggaaagcgagctaagcctgaacgatctcgccctgccgatttttgtcgaa
gaaggcgtcgatgactacaaagccattgaagcgatgccgggcgtgatgcgcattccggaa
aagcgtctggcgtatgaaattgagcgcatcgccaaagcgggcatccgctcggtgatgacc
ttcggcatttcgcaccacaccgatgccaccggcagcgatgcctggcaggaaaacggcctg
gtggcgcgcatgtcgcgtatctgtaaagagacagtgccggagatgatcgtcatgtccgac
acctgcttctgcgaatacacctcccacggccattgcggcgtgctgtgcggtcacggtgtg
gataacgatgccacgctgattaacctcggcaagcaggcggtggtcgctgcccatgccggt
gccgatttcatcgcgccgtccgcagcgatggatggccaggtggcggcaattcgtcaggcg
ctggacgccgccggatttaccgataccgccatcatgtcttactcgaccaagtttgcgtca
tcgttctatggtcccttccgcgaagcggcaggcacggcgctgaaaggcgatcgcaaaacc
taccagatgaacccgatgaaccgtcgtgaagcgatccgtgaatccctgattgacgccgcc
gagggcgctgattcgctgatggtaaaaccggcgggtgcctatctggatatcctgcgcgat
attcgtgagcgcagcgatctgccgctggcggcttatcaggtcagtggcgaatacgcgatg
atcaagttcgccgctcaggctggcgccatcgacgagcgcaacgtggtgcttgaaagcctg
ggagccatcaagcgcgccggtgccgatgtgattttcagctactttgcgctggatctggct
gaaaataaggtgctctaa
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