Duffyella gerundensis: EM595_3384
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Entry
EM595_3384 CDS
T04258
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
ege
Duffyella gerundensis
Pathway
ege02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ege00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
EM595_3384
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ege02000
]
EM595_3384
Transporters [BR:
ege02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
EM595_3384
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
CUU25615
UniProt:
A0A0U5L6T9
LinkDB
All DBs
Position
1:3680733..3682247
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AA seq
504 aa
AA seq
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MKLRHSLLTALSGLMLLGASAQTQAESVIRIGLGADPDMLDPHLARTYYGRFVFAAMCDR
LVDIDEKLQVVPGLATSWAWSDEGKTLTMNLREGVTFHDGEKFDASAVKFNLERALTLPG
SLRKSELSSVESVEVSGPLQVKIHLKTPDAALLSQLTDRAGAMLAPQAAGKADFVTHPVC
SGPYQFDSRVQQDRIVLKRYEGYWNKAAYHFDKVIFLPIPDASVRLANLRAGDLDLTEGI
AASDVKTLQGDARLSMAKVTGLGYQGITFNIANGKVDANSPLKDARVRQAFSLAIDRDAL
NQVVFEGLYTPANQAFSPVSPYHVKLPVAPRNVEKAKALLQAAGVKTPLNVTLLVTNNPT
AQQVGQVIQAMASEAGFNVNLEMSEFASLLDRQQRGDFQLSLSGWSGRPDPDGSIYAFIN
SKGTLNDGHYSNAQVDSWLSEARRTNDTAARQTRYNDVVNQLQTDMPIAYLYFEPRIFGM
SKKLQGFKAWPDGLVRLAGVTLAP
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atgaagcttcgccattctctgttaaccgccctcagcggcctgatgttgcttggtgccagt
gcccagacgcaggcggaaagcgtgatccgcattggtctcggtgccgatcccgatatgctc
gatccccatctggcgcgcacctattacggacgctttgtgtttgccgcgatgtgcgatcgt
ttggttgatatcgatgagaagttgcaggtggttcccggcctggccaccagctgggcatgg
agcgatgaggggaaaaccctgaccatgaatctgcgcgaaggcgtcacctttcacgacggc
gagaagttcgatgccagcgcggtgaagttcaacctcgaacgcgcgctgacgctgcctggc
tcgctgcgtaaaagcgagctttcgtcggtggaaagcgttgaggtcagcggcccgttgcag
gtgaagattcacctgaaaacccccgatgctgcgctgctcagccagctgaccgatcgtgct
ggcgccatgctggcaccgcaggcggcgggcaaagcagattttgtcacccatccggtctgt
tccggcccctatcagttcgacagccgcgtacagcaggatcgtatcgtgctgaagcgctat
gaaggctactggaacaaggcggcctatcatttcgacaaggtgattttcctgccaattcct
gacgcctcggtacgcctcgccaacctgcgcgccggcgatctcgatctcaccgagggcatc
gccgccagcgatgtcaaaaccctgcagggcgatgcgcgtctgagcatggcaaaagtcacc
ggcctggggtatcagggcattacctttaacatcgccaacggcaaagtggacgccaacagc
ccgctgaaagatgcgcgcgttcgtcaggcattctcactggctatcgatcgcgatgcgctg
aatcaggtggtgtttgaaggcttatataccccggccaatcaggccttctctccggtcagc
ccgtaccatgtcaaactgccggtggcaccgcgcaacgttgaaaaagccaaagcgctgttg
caggccgcaggggtgaaaacgccactcaacgttacgctgctggtcaccaataatcccacc
gcgcagcaggtcggccaggtgattcaggcaatggccagcgaggcgggattcaacgtcaat
ctggagatgagcgaattcgccagcctgctcgatcgccagcagcgtggcgattttcagctc
agcctgtcgggttggtcaggtcgtcccgatcctgacggcagcatctacgcctttattaac
agcaagggtacgctcaatgacgggcactacagcaatgcgcaggtagacagctggctcagc
gaagcccgccgcaccaacgacactgcggcccgccagacgcgctacaacgacgtggtgaat
cagctgcaaaccgacatgccgatcgcgtatctctattttgagccacgcatcttcggcatg
agcaaaaagctgcagggcttcaaggcctggccagatggtctggttcgccttgccggtgtc
actctggctccctga
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