Duffyella gerundensis: EM595_p0065
Help
Entry
EM595_p0065 CDS
T04258
Symbol
appF
Name
(GenBank) Oligopeptide transport ATP-binding protein AppF
KO
K02032
peptide/nickel transport system ATP-binding protein
Organism
ege
Duffyella gerundensis
Pathway
ege02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ege00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
EM595_p0065 (appF)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ege02000
]
EM595_p0065 (appF)
Transporters [BR:
ege02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
EM595_p0065 (appF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
oligo_HPY
AAA_21
AAA_16
AAA_22
AAA_33
AAA_29
AAA_30
PRK
nSTAND3
SMC_N
Motif
Other DBs
NCBI-ProteinID:
CUU25765
UniProt:
A0A0U5L9H0
LinkDB
All DBs
Position
pEM01:62790..63764
Genome browser
AA seq
324 aa
AA seq
DB search
MNQDYVIEVDGLKKYFPIRDGLFGQETGQLRAVDDVSFRIRRGSIFGLVGESGSGKTTVG
RTLLGLYEQTAGHILWQGQDLQQLTARQRQALRPKMQLVFQDPYSALNPRIRVGDAIGEA
MLQHKLCSRAELRDKVLQVMTICGLAAQHYDRFPHEFSGGQRQRIGIARALILNPDFIVA
DEPISALDVSIQAQIINLFSDLRDDHGVTFLFISHDLGVVEHLCDDVAVMYLGQLVETAS
RDRLFSQPLHPYTQALLAAVPTLQPQQKPSQIVQGDIPDPANPPPGCRFSSRCPLATAQC
RSEAPRLRQVAEGHQVACHKVMPA
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atgaaccaggactatgtgattgaagtcgacgggctgaaaaaatattttcccatccgcgat
ggcttgtttggccaggaaaccgggcagctgcgcgccgtggatgacgttagctttcgcatt
cgtcgcggttccatctttggcctggtcggcgaatcgggcagcggtaaaaccaccgtaggg
cgcacgctgctcgggctgtatgaacaaaccgcaggccatattctctggcaggggcaggat
ctgcagcagttaaccgcgcgacaacgccaggcgctgcggccaaaaatgcagctggtcttt
caggacccttacagcgcgctgaatccacgcattcgcgtcggcgacgccatcggcgaggcg
atgttgcagcataagttgtgtagccgggcagaactgcgggacaaggtgctacaggtgatg
accatttgcggtctggccgcgcagcattatgatcgctttccgcatgagttttccggcgga
cagcgacagcgcatcggtattgcccgcgcgctgatcctgaatcctgactttatcgtcgcc
gatgagccgatttccgcgctggacgtgtcgattcaggcgcagatcatcaacctgttttcc
gatctgcgtgacgatcacggcgtcacctttctgtttatctcgcacgatctcggggtggtg
gagcacctttgcgatgatgtcgcggtgatgtatctcggtcagctggtggaaaccgccagc
cgcgaccggctgttcagtcaaccgctgcatccttatacccaggcgctgctggcggcagtg
ccgacgctacagccgcagcagaaaccgtcgcagatcgtgcagggtgatattcccgatccg
gcgaatccgccgccgggctgtcgcttctcttcgcgctgtccgctggcgacagcgcagtgc
cgcagcgaggcaccgcgtttgcgacaggtggctgaagggcatcaggtggcgtgccataag
gtcatgccagcgtga
DBGET
integrated database retrieval system
