Eucalyptus grandis (rose gum): 104424624
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Entry
104424624 CDS
T03547
Name
(RefSeq) LOW QUALITY PROTEIN: ABC transporter B family member 4
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
egr
Eucalyptus grandis (rose gum)
Pathway
egr02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
egr00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
104424624
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
egr02000
]
104424624
04147 Exosome [BR:
egr04147
]
104424624
04090 CD molecules [BR:
egr04090
]
104424624
Enzymes [BR:
egr01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
104424624
Transporters [BR:
egr02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
104424624
Exosome [BR:
egr04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
104424624
CD molecules [BR:
egr04090
]
Proteins
104424624
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_29
AAA_22
RsgA_GTPase
ABC_ATPase
AAA_16
AAA_21
Zeta_toxin
AAA_15
DEAD
AAA_24
DUF815
AAA_30
AAA_23
YobI-ATPase
DLIC
AAA_25
Motif
Other DBs
NCBI-GeneID:
104424624
NCBI-ProteinID:
XP_010035392
LinkDB
All DBs
Position
2:complement(37400558..37407019)
Genome browser
AA seq
1287 aa
AA seq
DB search
MMSVQSSSNVDVEMRVATNPTSHAEAEDSPGKSKDDEKTNSVLFPKLFLFADFTDMFLML
VGTMGAVGNGLGMPLMTVLLGQLIDSFGTNQHNKNVVHLVSKISLKFIYLAVFTGAAAFL
QVTFWMVTGERQAARIRGLYLRTILRQDVAFFDKETTTGEVVGRMSGDTVLIQDAMGEKV
GKFIQLVSTFIGGFIIAFTKGWLLTLVMISSIPALVVSGALMSLIIGKMASRGQSAYAKA
ANVVEQTIGSIRTVASFTGEKQAIATYDKFLVDAYKSGVHEGMAAGFGLGTAFLIIFCSY
ALAIWFGGKMILEKGYTGGQVLNVIVAVLTGSMSLGQASPCMTAFAAGQAAACKMFETIN
RKPKIDSSDTCGKTLDEIHGDIELKDVYFSYPARPDELIFNKFSLHIPSGTTAALVGQSG
SGKSTVISLIERFYDPHAGEVLIDGINLKEFQLKWIRSKIGLVSQEPVLFASSIKDNIAY
GKENATIEEIRSAAEVANAAKFIDKLPKGLNTMVGEHGTQLSGGQKQRVAIARAILKDPR
ILLLDEATSALDAESERIVQEALDRIMANRTTVIVAHRLSTVRNADMIAVIHQGKIVERG
THSELLKDPDGAYGQLIRLQQVNREQDQAPDDQNKPQNLLDGRQSSQRMSFLRSIXSGSS
GVGNSSHHSLSISLGLPTGLNILDGAPANLESSSLEKTETAAEASICRLAYLNKPEVPVL
LIGSVFAIIAGAVFPIFGVIISGVVKTFYEEPHKLRKDSKFWALMFVTLGLVSLVAYPAR
TYFFSIAGCRLIQRIRSMCFEKVVHMEVGWFDEPEHSSGAIGARLSADAATVRALVGDAV
AQLVQNSASAVAGLVIAFVTSWQLAFIILALLPLIFVNGFVQVKFIKGFSADAKMMYQEA
SQVATDAVGSIRTVASFCSEEKIMQLYARKCDGPIKAGIRLGLISGVGFGLSVFILFAVY
GTCFYAGARLVQDGKITFSEVFRVFFALTMAATAITQTSSLTQDSTKARSATASVFKIID
RKLKIDPHDESGVTLENVKGEIELRQISFKYPSRPDIQIFKDLSLTIHSGKTIALVGESG
SGKSTVIALLQRFYDPDSGHITLDGIEIQKLQLKWFRQQMGLVSQEPALFNDTIRANIAY
GKDGEAMEAEILSASESANAHNFVSSLQQGYDTLVGERGIQLSGGQKQRVAIARAIVKDP
KILLLDEATSALDAESERVVQDALDKVMVNRTTVIVAHRLSTIKNADVIAVLKNGAIVEK
GNHDSLINIKDGHYASLVALNTSAASS
NT seq
3864 nt
NT seq
+upstream
nt +downstream
nt
atgatgtctgtacagagcagctcaaacgtggatgtagaaatgcgtgtagctactaatcca
acgagtcatgcggaggcggaggacagtcctggaaagagtaaagacgatgagaaaactaat
tcagttctctttcccaagctgttcttgttcgcagacttcaccgacatgtttttgatgctc
gtgggtacgatgggtgctgttggcaatggcttaggtatgcccctcatgacagtacttctc
gggcaattgattgattcattcggaactaaccagcacaacaaaaatgtggtgcacctcgtt
tccaagatatctctgaagtttatctacctggcagtgttcactggtgcggcggcatttctt
caggtaactttctggatggtcacgggagagagacaggccgctcggataaggggactgtat
ctacggacgatactgagacaggacgttgcctttttcgataaggaaacaaccacgggagag
gttgtgggaagaatgtctggtgataccgttcttattcaagatgccatgggtgagaaggta
ggaaagttcatacagctcgtgtcgacgttcatcgggggattcatcatcgcatttactaaa
gggtggctgcttactttagtcatgatatcatccattcctgcccttgtggtttctggtgcc
ctcatgtccctgatcataggcaagatggcatcacggggacaaagcgcttatgcaaaagcg
gcaaatgttgttgaacaaacaattgggtcaattagaactgtagcgtcattcactggggag
aagcaggctatagcaacttacgacaagttccttgtggatgcatacaaatcgggagttcac
gaaggcatggctgctggattcggtcttggtacagcctttttgattatcttctgcagttac
gcactggcaatatggttcggaggaaagatgattctggaaaaaggatataccgggggtcaa
gtgctcaatgtcatcgttgctgtcttaactggttcaatgtccttaggacaggcttctccc
tgcatgactgcatttgctgctggtcaagccgcagcatgtaagatgtttgagaccatcaac
aggaagcccaagattgattcttccgacacatgtggcaagacattggacgaaattcatgga
gacatagagcttaaggatgtttacttcagctacccagccagaccagatgagctgatattc
aataaattctctcttcacataccaagcggcacaactgcagccttggttggacaaagtgga
agtggaaaatccactgtgatcagtcttatagagaggttttatgatccgcatgcaggtgaa
gtgctcatcgatggcataaatctgaaggaatttcagcttaaatggatacggagcaagatc
ggcctcgtaagccaggaacccgtgttgtttgcatcaagcatcaaggataatatagcgtat
ggaaaagagaacgcaaccattgaagagataagatccgcagcagaagtagccaatgctgct
aaattcattgataaattgcccaagggactgaacacaatggtcggtgagcacggtactcaa
ctctccggaggacagaagcaaagagttgccattgcgagagcaattctaaaagatcctagg
attttgcttttagacgaggccacaagcgcacttgatgcagaatcagagaggatagtacaa
gaggcattagacaggataatggctaatcgaaccactgtcattgtagcacaccgtttgagc
actgtcaggaatgccgatatgatcgcggtcattcaccaaggaaagatagtggagagaggt
acacactcggaactgctaaaggatcccgatggagcatatggtcagctaatacgcctccag
caagtaaacagagagcaagaccaagcgccagatgatcaaaataaaccacaaaatctcctc
gatggtagacaatcgagtcaaagaatgtccttcttaagatccatanagtcgggatcatca
ggtgtgggaaatagcagccaccattccttatctatctcgttaggtctgcccacagggtta
aatatccttgatggtgcacctgcaaatctagagtcctcttccttggagaaaacagaaaca
gctgcagaagcttcaatctgtcgtctcgcatatcttaacaagccagaagttcccgtgcta
ctaataggatctgtttttgcaatcattgcgggtgctgtattccccatttttggtgtaata
atatctggtgttgtcaagacattttatgaagaacctcataaactaaggaaagattcgaag
ttttgggcattgatgtttgtgactctcggcctggtgtcattagtagcatacccagcaagg
acgtacttcttctcgatagcaggttgcagattgatccagcggataagatcaatgtgtttt
gagaaggtggtgcacatggaggtgggttggttcgatgagccagagcactccagcggtgcc
attggcgcaaggctatcagcagatgcagcgacagtgcgggccctagttggggatgcagta
gcccagctcgttcaaaatagtgcctctgcagttgctggtttggtcatcgcttttgtgact
agctggcaattggcgttcatcatccttgcgttgctccctctgatatttgttaacggattc
gtccaagtaaaattcattaaaggattcagcgcagatgccaagatgatgtaccaggaagct
agtcaagtagctactgatgcagttggaagcatcaggacagttgcttctttctgttctgaa
gaaaagatcatgcaactttatgccaggaaatgcgacgggccaataaaagccggaataaga
ctagggctgattagcggagtcgggtttgggctatcggtcttcatactttttgcagtctat
ggcacttgcttctatgctggagctcgactcgtccaggatggcaagataacattttcagaa
gttttccgcgtgttttttgccctgaccatggcagccactgcaattacccagacaagttcc
ctcactcaggactccaccaaagccaggagcgcaactgcctcagttttcaaaatcatcgac
agaaaattgaaaatagacccccatgatgagtccggggtaaccctagaaaacgtgaaggga
gaaatagagcttcgtcaaatcagcttcaagtatccttctcgcccggatatacagattttc
aaagatctcagcttgaccattcattccggcaaaactattgctttagtaggagagagcggg
agtggtaaatcaactgtaatagctcttttgcaacgtttttatgatcccgattctggtcac
atcacacttgatgggattgaaattcagaagctacagttaaagtggtttaggcagcagatg
ggccttgtgagccaagaaccagctctgttcaatgacacgatccgtgccaatatagcctat
ggaaaggatggagaggcaatggaagcagagatattgtctgcatcagagtcggcaaatgcc
cataattttgtcagcagtttgcaacagggttatgacacattagtaggcgagcgtggaatc
cagttatccggtgggcagaagcagcgggtggccattgcacgtgctatagtgaaagatcca
aagatacttcttctcgacgaggctactagcgcactggatgctgaatctgaaagagttgtt
caagatgcattagacaaagtcatggtcaatagaacaacagttatagtggcgcataggtta
tcaacaataaaaaatgcagacgtgatcgctgtgctaaaaaatggagcgattgttgagaaa
ggcaaccatgactctctgatcaatatcaaagacggtcactatgcatccttggttgctctg
aacacgagcgcggcatcatcctaa
DBGET
integrated database retrieval system