KEGG   Elaeis guineensis (African oil palm): 105046728
Entry
105046728         CDS       T03921                                 
Name
(RefSeq) cullin-4-like isoform X1
  KO
K10609  cullin 4
Organism
egu  Elaeis guineensis (African oil palm)
Pathway
egu03420  Nucleotide excision repair
egu04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:egu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    105046728
  09124 Replication and repair
   03420 Nucleotide excision repair
    105046728
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:egu04121]
    105046728
   03400 DNA repair and recombination proteins [BR:egu03400]
    105046728
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:egu04147]
    105046728
Ubiquitin system [BR:egu04121]
 Ubiquitin ligases (E3)
  Multi subunit Ring-finger type E3
   Cul4 complex
    Cullin
     105046728
DNA repair and recombination proteins [BR:egu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      105046728
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      105046728
Exosome [BR:egu04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   105046728
SSDB
Motif
Pfam: Cullin Cullin_Nedd8 KCNQ_channel
Other DBs
NCBI-GeneID: 105046728
NCBI-ProteinID: XP_010923712
UniProt: A0A6I9RBB6
LinkDB
Position
6:complement(7851511..7881977)
AA seq 870 aa
MTHAKRPFSSGSSGGGSTTHGSSSSGGLIGSPLSPSVTTSSSMKKAKCQPAAAAAAAAVS
VEREKNGLHVHPTRYDPAAAQSAEEEDSMLLDQEDLKAGASTAITTTGVAANLSRKKATP
PQPSTKKQLVIKLVKGKPTLPTNFEEDTWATLKSAITAIFLKQPDPCDSEKLYQAVSDLC
LHKMGGNLYQRIQKECEVHISATLSSLVGQSPDLVVFLSLVEKCWQDFCDQILMIRGIAL
YLDRTYVKQTPNVRSLWDMGLQLFRKHLSLCSEVEHKIVTGLLRLIERERLGEAIDRTLL
SHLLKMFTALGIYTESFEKPFLECTSEFYAAEGVKYMQQSDVPDYLKHVESRLHEEHERC
LLYLDANTRKPLVATAEKQLLERHTSAILDKGFTMLMEANRVNDLQRMYMLFQRVNALEL
LRQALSSYVRGSGQGIIMDEEKDKDLVSYLLEFKASLDTIWEESFFRNEAFSNTIKDSFE
HLINLRQNRPAELIAKFLDEKLRAGNKGTSEEELEGTLDKVLVLFRFIQGKDVFEAFYKK
DLAKRLLLGKSASIDAEKSMISKLKTECGSQFTNKLEGMFKDIELSKEINDSFKQSSQAR
TKLPTGIEMSVHVLTTGYWPTYPPMDVRLPHELNVYQDIFKEFYLSKYSGRRLMWQNSLG
QCVLKAEFPKGKKELAVSLFQTVVLMLFNDTQKLSFQDIKDSTGIDDKELRRTLQSLACG
KVRVLQKIPKGREVEDDDSFVFNEEFSAPLYRIKVRFSLLKSVLWNFKHVTRANMSCYQV
NAIQMKETVEENTSTTERVFQDRQYQVDAAIVRIMKTRKVLSHTLLITELFQQLKFPIKP
ADLKKRIESLIDREYLERDKNNPQIYNYLA
NT seq 2613 nt   +upstreamnt  +downstreamnt
atgactcacgcaaagcggcccttctccagcggcagcagcggcggcggcagcaccacccac
ggcagcagctcatccggcggactcatcggaagccccctctccccctccgtcaccacctcc
tcctccatgaagaaggccaagtgccagccggccgccgccgccgccgccgccgccgtctcc
gtcgagagggagaagaatggtctccatgtccatcccacccgctacgaccctgccgccgcc
cagtccgccgaggaggaggattccatgctcttggaccaggaggaccttaaggcgggcgca
tccactgccatcacgaccaccggcgtcgccgccaacctctccaggaagaaggccacccct
cctcagccgtcgactaagaagcagctagtgatcaagctcgttaaaggtaagccaactctg
ccaacaaattttgaagaggatacatgggcaacattgaagtctgctattacagctatattt
ttgaagcagccagatccatgcgactctgaaaagctttatcaggctgtcagtgatctttgc
ctacacaagatgggaggaaatctttatcaacgtatccagaaggaatgtgaagtacatatt
tcggcaacactatcctcattggttggccagagccctgacttggttgtatttttatcattg
gtagaaaaatgctggcaggatttttgtgaccagatcttgatgatacgtggtatagcctta
tatcttgatagaacttatgtcaagcaaaccccaaatgttcggtcattgtgggacatgggg
ttgcaattgtttcggaagcatctctctttatgttctgaagttgaacataagattgtcact
ggccttttgaggttaattgagagggaaagattaggtgaagctatcgataggacactgctc
agtcatcttttaaagatgttcacggctcttggaatttacacagagagctttgaaaagccc
tttctggaatgcacttctgagttttatgctgctgaaggtgtgaaatatatgcaacaatca
gatgttccagactatttgaagcatgtggagtcaaggctacatgaggaacatgaaagatgc
ttgctctacttagatgcaaatacgaggaagccccttgtagcaactgctgaaaagcaactc
cttgagcgacacacatctgcaattcttgacaagggatttacaatgctcatggaagcaaat
cgagtcaacgaccttcagagaatgtacatgctctttcagagggttaatgctctggagttg
ttaagacaagctcttagctcgtatgttcggggttctgggcaaggtattattatggatgaa
gagaaagacaaagatttggtttcctatctcttagagtttaaagcatctcttgatacaatt
tgggaagaaagtttcttcagaaatgaagctttttcaaatactataaaggattcatttgag
catctcattaaccttcgtcagaataggccagctgaactgatcgcaaaatttctggatgag
aagcttcgtgctggcaacaagggtacatctgaagaagaattagagggtacacttgataaa
gtgttggttttgtttaggtttattcaaggaaaagatgtctttgaggcattctataaaaag
gatcttgcaaaaagattattgttgggaaaaagtgcatcaattgatgctgaaaagtcaatg
atatctaagctcaaaactgagtgtggaagtcaattcacaaataaacttgaaggaatgttc
aaggacattgagttatcgaaagagattaatgattcgtttaagcaatcatctcaagccagg
acaaaacttccaactggtattgaaatgagtgttcatgtccttacgactgggtattggcca
acatatccccctatggatgttcggcttccacatgaactgaatgtttatcaggatatattt
aaggagttctatttgagtaagtacagtgggaggcgcttaatgtggcaaaattcattaggt
caatgtgttttaaaagcagaatttccaaaaggtaaaaaggaattggcggtgtcattgttc
cagactgttgtattgatgctgttcaatgacactcaaaagctcagtttccaagatattaag
gactcaactggcattgacgataaagagctgagaaggactttgcagtcacttgcatgtggc
aaagtccgagttctccaaaagatcccaaaaggaagggaagtagaggatgatgactcattt
gtatttaatgaagaattcagtgctcctctctaccgcattaaggtaaggttttcactgttg
aaatcagtactgtggaatttcaagcatgtaactagagctaacatgtcatgttaccaggta
aatgcaattcaaatgaaggagacggtggaagagaacaccagcaccactgaaagagtattc
caagaccgtcaatatcaggttgatgcggctattgtccgtatcatgaagacaagaaaagta
ctaagccacacgcttctaataactgagctctttcagcagctcaaatttcctataaaacca
gcagacttgaagaaaaggatagagagcctcatcgacagggaatacctggagcgggacaag
aacaatcctcagatctacaattacctggcttga

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