Egretta garzetta (little egret): 104130124
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Entry
104130124 CDS
T05152
Symbol
DDX55
Name
(RefSeq) ATP-dependent RNA helicase DDX55
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
egz
Egretta garzetta (little egret)
Brite
KEGG Orthology (KO) [BR:
egz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
egz03009
]
104130124 (DDX55)
Enzymes [BR:
egz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
104130124 (DDX55)
Ribosome biogenesis [BR:
egz03009
]
Eukaryotic type
Pre-60S particles
Helicases
104130124 (DDX55)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
DUF4217
ResIII
Helicase_C_2
SHOCT
AAA_22
Motif
Other DBs
NCBI-GeneID:
104130124
NCBI-ProteinID:
XP_009641426
LinkDB
All DBs
Position
Unknown
AA seq
554 aa
AA seq
DB search
MSNKDVAAEAVTGSGKTLAFVIPILEILLRREEKLKKMQVGAIIITPTRELAIQIDEVLS
HFTKHFPRFSQILLIGGRNPMEDVEKFKECGGNIIVATPGRLEDLFRRKADGLDLASCVK
SLDVLVLDEADRLLDMGFEASLNAILDFLPKQRRTGLFSATQTQEVENLVRAGLRNPVRI
SVKEKGVAASNTQKTPTRLENYYMICKADEKFNQLVHFLRQHKQEKHLVFFSTCACVEYY
GKALESLIKQVKIMSIHGKMKHKRNKIFTEFRKLPGGILVCTDVMARGIDIPEVHWVLQY
DPPSSASAFVHRCGRTARIGNVGSALVFLLPMEESYINFLSINQKCPMQEMKPQANVLDL
LPKLKSMALADRAVFEKGMKAFVSYVQAYAKHECNLIFRIKDLDFASLAKGFALLKMPKM
PELRGKSFPDFTPVTVNTDSISFKDKNREKQRQKQLEQQRKEREENGGKKKPIKNKAWSK
QKAKREKKKKITAKRKREEGSDIEDEDMEELLNDTRLLKRLKKGKISEEEFEKRVIGSQS
RLKAETLADLKSEG
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atgagtaacaaagatgttgctgcagaagcggtaacaggcagtggcaaaaccttagcgttt
gtaattcccatactggaaattctcctcagacgggaagaaaaattaaagaaaatgcaggtt
ggagctataattatcacaccaacaagggaattagctattcaaattgatgaggtgctatca
catttcacaaaacacttcccaaggtttagtcagattcttttaattggtggtaggaatccc
atggaagatgttgaaaagtttaaggaatgtggtgggaacatcattgtagctacacctggc
cgcttggaggatctgttcagaagaaaagcagacgggctggatctagcaagttgtgtgaag
tctctggatgtgttggtattagatgaagcagacagacttctagatatgggctttgaagca
agtttaaatgccattctggactttttgcccaagcagagacggacaggtctgttctcagca
actcaaactcaagaggtggagaacctggtgagagcaggtctccggaatcctgtccgcatc
tcagtgaaagagaagggagtagcagcaagcaatacacagaaaactccaacacgcctggag
aactattatatgatctgcaaagcagatgaaaaatttaatcagctggtgcattttcttcga
cagcacaaacaggaaaaacatctagtctttttcagcacgtgtgcctgtgtggaatactat
gggaaggctttggaatccttaatcaaacaagtgaaaataatgagcattcatgggaaaatg
aaacacaagcgtaacaagatttttactgagtttcggaagctcccaggtggcattttagtt
tgcactgacgtgatggctcgtggcatagacattccagaagtacactgggttttacagtat
gacccacctagcagtgcaagtgcctttgtgcatcggtgtggtcgaacagcgcgtattggc
aacgtaggcagcgcgcttgtatttttgcttcccatggaagaatcttacattaactttctc
tcaatcaaccaaaagtgtcccatgcaggaaatgaaaccacaggcaaacgtgttagatctt
cttccaaaactgaagtctatggccctagctgacagggcggtgtttgagaaagggatgaaa
gcatttgtgtcttacgtccaggcttatgccaaacatgaatgtaatctgatcttccgaata
aaagatctggattttgctagccttgccaaaggttttgcattgttaaaaatgccaaagatg
cctgaactaagaggaaaaagttttccagactttactccagtcactgttaatacagactcc
atttcatttaaggataaaaatagagaaaaacagagacaaaagcaattagaacaacaaaga
aaagaaagagaggagaatggagggaaaaagaaacccataaagaacaaagcctggtcaaag
cagaaagccaagagggagaagaaaaagaaaataacagctaaaaggaagcgtgaagagggt
tctgatattgaagatgaagatatggaagagttgctgaatgacacaagactcttgaaaaga
ttaaaaaaaggaaaaatcagtgaagaagagtttgagaagagagtaataggcagccagagt
agactcaaagcagaaactcttgctgacttaaagtctgaaggttga
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