KEGG   Encephalitozoon hellem: EHEL_100240
Entry
EHEL_100240       CDS       T02287                                 
Name
(RefSeq) DNA-directed RNA polymerase subunit B
  KO
K03010  DNA-directed RNA polymerase II subunit RPB2 [EC:2.7.7.6]
Organism
ehe  Encephalitozoon hellem
Pathway
ehe03020  RNA polymerase
ehe03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:ehe00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    EHEL_100240
  09124 Replication and repair
   03420 Nucleotide excision repair
    EHEL_100240
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ehe03021]
    EHEL_100240
   03400 DNA repair and recombination proteins [BR:ehe03400]
    EHEL_100240
Enzymes [BR:ehe01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     EHEL_100240
Transcription machinery [BR:ehe03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Core subunits
     EHEL_100240
DNA repair and recombination proteins [BR:ehe03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      EHEL_100240
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_1 RNA_pol_Rpb2_2 RNA_pol_Rpb2_7 RNA_pol_Rpb2_3 RNA_pol_Rpb2_4 RNA_pol_Rpb2_5 MlaD
Other DBs
NCBI-GeneID: 13466553
NCBI-ProteinID: XP_003888100
LinkDB
Position
X:20256..23681
AA seq 1141 aa
MESMFTKEHSWSIISSFFEQKGLVRQQLDSFDQFVKTKMQEVIDESPAIIVQSAPTAGTE
TQKRITVRFGQIYVSKPPIYTESDGRTITVFPNEARTRDLTYASPLFIDVIKETVSELGV
VDKHKYSRVPFGSLPVMLRSSYCVLHGLGDKDLIDLGECPYDQGGYFIVNGSEKVIVAQE
RMASNTVYVFKKAQPATYTHYAEIRSVPEKSSRNPSTLSMKLCRSPVAIRVSLPLVKQDV
PLFVLYRALGFLSDKEIIDHILYEDDDEMFELLKESIEEGMVVQDQNVALDYIGKRTAPV
GTPQEKRIMMAKDLLAKEVLPHIGTQEFCETKKAYFIGYIVQRLLLVALGRRNPDDRDHY
GKKRMDLSGPLLASLFRTLFKKLCADTTRHMQKCIENGREFNIALGLKASIITQGFRYAL
ATGNWGDQAKAMQTRAGVAQVLNRYNFVSTLSHLRRVNTPIEKEGKLAAPRQLHNTHWGM
VCPAETPEGQACGLVKNLSLMAYISVGSSSGPLIEFLEECGVESLEEISNFQLNTATKVF
VNGVWIGIHSDPVYLVKSLKLLRRSLEMDKEVSIVRDIREKEIRIQSDAGRPCRPLMVVK
DNKLVITEEDIGRLRRGEIKWDNLIGEGFIEFLDVEEEEMSMIAMSTKVLDDERKSSSDV
KISYTHCEIHPALILGICASTIPFPDHNQSPRNTYQSAMGKQAMGIYATNFLLRMDTLSN
ILFYPQKPLVTTKSMEYLRFKELPSGQNALVAIACYSGYNQEDSVIMNQSAIDRGLFRSF
FYRTYTDQESMSRPGVNEEFCKPNRGSVLRMKNLNYNKLDDDGLINPGTRVTGDDVLIGK
ITPILDPERSTKETPVYVYKDSSTAMRRTETGIVDTVIVTNKDGYKFSKVKVRSGRIPQM
GDKFASRHAQKGTIGITLRQEDMPFTSDGIVPDIIINPHAIPSRMTIGHLIECLLGKVSA
MSGEEGDATPFSGMSVNEISARLKSYGFQQRGLEVMYNGMTGRKLRAQIFFGPTYYQRLK
HMVDDKIHARARGPLQILTRQPVEGRSRDGGLRFGEMERDCIISHGASAFLKERLMDVSD
AYSCYVCNICGLLAMGGSKVNECKGCSNTTNVSIVEIPYAFKLLIQELMGMNIAPRIRFE
E
NT seq 3426 nt   +upstreamnt  +downstreamnt
atggagtccatgttcacaaaggagcatagctggtcgataatatcctcgttcttcgagcag
aaagggcttgttagacagcagctagattcctttgatcagttcgttaagacaaagatgcag
gaagttattgatgagagccctgcaataattgttcagtctgcacccacggcagggacagaa
acccaaaagaggataactgttagatttgggcaaatatatgtttcaaagccacccatttat
actgaatccgatgggagaacaatcactgtgtttcccaacgaggcacgtacgagggaccta
acctatgcatctccactatttatcgatgtcataaaggagacagtatctgagctaggcgtt
gttgacaagcacaagtactcaagggtaccttttgggtcgctgcctgtgatgttgagatct
tcgtactgtgttctccatggattgggagacaaagatcttattgaccttggagaatgccca
tatgaccagggaggatacttcattgtaaatggatctgagaaggttattgtggcccaagaa
cgaatggctagcaacactgtttatgtgttcaagaaggcacagcctgcaacgtatacacac
tatgcggaaatccgttctgttcctgaaaagagctctagaaatccaagtaccttatctatg
aagctatgtagatcacctgtggcaataagggtttcgcttccattggtcaagcaagatgtt
cctctctttgtcttgtatagagcgctagggttcttgtctgacaaagagattattgatcat
attctctatgaagatgacgacgagatgtttgagcttctgaaggaaagcattgaggagggg
atggttgtgcaggatcaaaatgtggcgttggactatatagggaagaggactgcgcctgtg
gggacacctcaggaaaaaagaataatgatggcaaaggatcttctagcaaaggaggttctt
ccccacattggaacacaggaattctgtgaaaccaagaaggcatattttattggatacatt
gttcaaagactactgcttgtggcattggggagaaggaatcctgacgacagagaccattac
ggaaaaaagagaatggacctgagcggaccattgcttgcatctctattcaggactctattt
aaaaagctgtgtgcagatacaacaagacacatgcagaagtgtatagagaatgggcgagag
tttaatatagcccttgggctgaaagcaagcataattacacagggatttcgatatgcctta
gcaacgggaaactggggagaccaagcaaaggctatgcagaccagagctggagttgcccag
gtcctgaatagatacaactttgtatcgacgcttagtcatttgagaagagtcaacacgcca
attgaaaaggaagggaagttggcggcgccgcgacaacttcataacacgcattggggtatg
gtttgcccagctgagacgccggagggacaagcatgtgggcttgtgaagaacttatctcta
atggcatatatttctgttggatcttcctctgggccattgatagagtttttggaggagtgt
ggagttgagtcgcttgaggagatatctaattttcagctcaatacggcaactaaagttttt
gttaacggtgtatggattgggattcactctgaccctgtatatctagtaaagtcgcttaag
ctgttgagaagaagtcttgaaatggataaggaggttagcattgtcagagacatcagagaa
aaggaaatcagaatacaatcagacgctggaaggccttgcaggcctttgatggttgttaag
gacaacaagcttgtgattacagaagaggatatcgggaggctaagaagaggggaaatcaaa
tgggacaacttgattggagaagggtttattgagtttctggatgttgaggaggaagagatg
tccatgatagcgatgagcacaaaggtccttgatgatgaacgcaagagctcctctgatgtg
aagatatcgtatacacactgtgagattcatcccgcactaatacttggaatctgtgcttct
actattccgtttcctgatcataaccaaagtccccgtaatacttatcaaagtgctatgggc
aagcaagcgatgggaatctatgcaacgaatttcctattaagaatggacactttgagtaac
attctgttctatcctcagaagcctcttgtgacaacaaaaagcatggagtatctcaggttc
aaggagctaccgtctggacagaatgccctggttgcgattgcatgctattctggatataac
caggaggatagtgttattatgaaccaaagtgccattgatagaggtttgtttagaagcttt
ttctacagaacatacaccgatcaagaatctatgtcaaggccgggggtcaatgaagagttt
tgcaagcctaaccggggaagtgttctaaggatgaagaatcttaattataataaactggat
gatgacgggctcataaacccagggacgagggtcaccggagatgatgttcttattggaaag
ataacgcctatattggatcccgagaggagtactaaggagacgcctgtctatgtctacaaa
gatagcagcactgcaatgcgtaggacagaaacggggattgttgatacggttattgtcaca
aacaaggatggttacaagttctccaaggtcaaggtaagatcaggaaggattcctcagatg
ggagacaagtttgcatccaggcatgctcaaaagggaactattggaatcactttgaggcaa
gaggatatgccgttcacctctgatggaatagttccagatataattataaatcctcatgct
attcctagtcgtatgaccatcggacacttgattgagtgcctgctcggtaaggttagtgca
atgagtggggaggaaggtgatgcaacaccatttagcggaatgagtgttaacgagatatct
gcaaggctgaaatcttacggttttcagcaaagagggctggaagtcatgtataatggaatg
acagggaggaagctccgagcccaaatattctttggcccaacgtattaccagagacttaag
cacatggttgatgataagatacatgcaagagcgcgtgggcctcttcagatactcacgagg
cagcctgttgaaggaagatccagggacggagggcttcgatttggagaaatggagagagac
tgtataatttctcacggtgcctccgcctttctaaaggaaaggttgatggatgtgagcgat
gcatattcttgctatgtttgtaatatttgcggacttcttgcaatggggggaagtaaggtg
aatgaatgtaaaggatgcagcaacactacaaatgttagtatagtggagattccgtatgca
ttcaaactcttgattcaggaactaatgggaatgaatattgcacccaggattcgctttgaa
gaataa

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