Encephalitozoon hellem: EHEL_100240
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Entry
EHEL_100240 CDS
T02287
Name
(RefSeq) DNA-directed RNA polymerase subunit B
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
ehe
Encephalitozoon hellem
Pathway
ehe03020
RNA polymerase
ehe03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ehe00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
EHEL_100240
09124 Replication and repair
03420 Nucleotide excision repair
EHEL_100240
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ehe03021
]
EHEL_100240
03400 DNA repair and recombination proteins [BR:
ehe03400
]
EHEL_100240
Enzymes [BR:
ehe01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
EHEL_100240
Transcription machinery [BR:
ehe03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
EHEL_100240
DNA repair and recombination proteins [BR:
ehe03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
EHEL_100240
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_3
RNA_pol_Rpb2_4
RNA_pol_Rpb2_5
MlaD
Motif
Other DBs
NCBI-GeneID:
13466553
NCBI-ProteinID:
XP_003888100
LinkDB
All DBs
Position
X:20256..23681
Genome browser
AA seq
1141 aa
AA seq
DB search
MESMFTKEHSWSIISSFFEQKGLVRQQLDSFDQFVKTKMQEVIDESPAIIVQSAPTAGTE
TQKRITVRFGQIYVSKPPIYTESDGRTITVFPNEARTRDLTYASPLFIDVIKETVSELGV
VDKHKYSRVPFGSLPVMLRSSYCVLHGLGDKDLIDLGECPYDQGGYFIVNGSEKVIVAQE
RMASNTVYVFKKAQPATYTHYAEIRSVPEKSSRNPSTLSMKLCRSPVAIRVSLPLVKQDV
PLFVLYRALGFLSDKEIIDHILYEDDDEMFELLKESIEEGMVVQDQNVALDYIGKRTAPV
GTPQEKRIMMAKDLLAKEVLPHIGTQEFCETKKAYFIGYIVQRLLLVALGRRNPDDRDHY
GKKRMDLSGPLLASLFRTLFKKLCADTTRHMQKCIENGREFNIALGLKASIITQGFRYAL
ATGNWGDQAKAMQTRAGVAQVLNRYNFVSTLSHLRRVNTPIEKEGKLAAPRQLHNTHWGM
VCPAETPEGQACGLVKNLSLMAYISVGSSSGPLIEFLEECGVESLEEISNFQLNTATKVF
VNGVWIGIHSDPVYLVKSLKLLRRSLEMDKEVSIVRDIREKEIRIQSDAGRPCRPLMVVK
DNKLVITEEDIGRLRRGEIKWDNLIGEGFIEFLDVEEEEMSMIAMSTKVLDDERKSSSDV
KISYTHCEIHPALILGICASTIPFPDHNQSPRNTYQSAMGKQAMGIYATNFLLRMDTLSN
ILFYPQKPLVTTKSMEYLRFKELPSGQNALVAIACYSGYNQEDSVIMNQSAIDRGLFRSF
FYRTYTDQESMSRPGVNEEFCKPNRGSVLRMKNLNYNKLDDDGLINPGTRVTGDDVLIGK
ITPILDPERSTKETPVYVYKDSSTAMRRTETGIVDTVIVTNKDGYKFSKVKVRSGRIPQM
GDKFASRHAQKGTIGITLRQEDMPFTSDGIVPDIIINPHAIPSRMTIGHLIECLLGKVSA
MSGEEGDATPFSGMSVNEISARLKSYGFQQRGLEVMYNGMTGRKLRAQIFFGPTYYQRLK
HMVDDKIHARARGPLQILTRQPVEGRSRDGGLRFGEMERDCIISHGASAFLKERLMDVSD
AYSCYVCNICGLLAMGGSKVNECKGCSNTTNVSIVEIPYAFKLLIQELMGMNIAPRIRFE
E
NT seq
3426 nt
NT seq
+upstream
nt +downstream
nt
atggagtccatgttcacaaaggagcatagctggtcgataatatcctcgttcttcgagcag
aaagggcttgttagacagcagctagattcctttgatcagttcgttaagacaaagatgcag
gaagttattgatgagagccctgcaataattgttcagtctgcacccacggcagggacagaa
acccaaaagaggataactgttagatttgggcaaatatatgtttcaaagccacccatttat
actgaatccgatgggagaacaatcactgtgtttcccaacgaggcacgtacgagggaccta
acctatgcatctccactatttatcgatgtcataaaggagacagtatctgagctaggcgtt
gttgacaagcacaagtactcaagggtaccttttgggtcgctgcctgtgatgttgagatct
tcgtactgtgttctccatggattgggagacaaagatcttattgaccttggagaatgccca
tatgaccagggaggatacttcattgtaaatggatctgagaaggttattgtggcccaagaa
cgaatggctagcaacactgtttatgtgttcaagaaggcacagcctgcaacgtatacacac
tatgcggaaatccgttctgttcctgaaaagagctctagaaatccaagtaccttatctatg
aagctatgtagatcacctgtggcaataagggtttcgcttccattggtcaagcaagatgtt
cctctctttgtcttgtatagagcgctagggttcttgtctgacaaagagattattgatcat
attctctatgaagatgacgacgagatgtttgagcttctgaaggaaagcattgaggagggg
atggttgtgcaggatcaaaatgtggcgttggactatatagggaagaggactgcgcctgtg
gggacacctcaggaaaaaagaataatgatggcaaaggatcttctagcaaaggaggttctt
ccccacattggaacacaggaattctgtgaaaccaagaaggcatattttattggatacatt
gttcaaagactactgcttgtggcattggggagaaggaatcctgacgacagagaccattac
ggaaaaaagagaatggacctgagcggaccattgcttgcatctctattcaggactctattt
aaaaagctgtgtgcagatacaacaagacacatgcagaagtgtatagagaatgggcgagag
tttaatatagcccttgggctgaaagcaagcataattacacagggatttcgatatgcctta
gcaacgggaaactggggagaccaagcaaaggctatgcagaccagagctggagttgcccag
gtcctgaatagatacaactttgtatcgacgcttagtcatttgagaagagtcaacacgcca
attgaaaaggaagggaagttggcggcgccgcgacaacttcataacacgcattggggtatg
gtttgcccagctgagacgccggagggacaagcatgtgggcttgtgaagaacttatctcta
atggcatatatttctgttggatcttcctctgggccattgatagagtttttggaggagtgt
ggagttgagtcgcttgaggagatatctaattttcagctcaatacggcaactaaagttttt
gttaacggtgtatggattgggattcactctgaccctgtatatctagtaaagtcgcttaag
ctgttgagaagaagtcttgaaatggataaggaggttagcattgtcagagacatcagagaa
aaggaaatcagaatacaatcagacgctggaaggccttgcaggcctttgatggttgttaag
gacaacaagcttgtgattacagaagaggatatcgggaggctaagaagaggggaaatcaaa
tgggacaacttgattggagaagggtttattgagtttctggatgttgaggaggaagagatg
tccatgatagcgatgagcacaaaggtccttgatgatgaacgcaagagctcctctgatgtg
aagatatcgtatacacactgtgagattcatcccgcactaatacttggaatctgtgcttct
actattccgtttcctgatcataaccaaagtccccgtaatacttatcaaagtgctatgggc
aagcaagcgatgggaatctatgcaacgaatttcctattaagaatggacactttgagtaac
attctgttctatcctcagaagcctcttgtgacaacaaaaagcatggagtatctcaggttc
aaggagctaccgtctggacagaatgccctggttgcgattgcatgctattctggatataac
caggaggatagtgttattatgaaccaaagtgccattgatagaggtttgtttagaagcttt
ttctacagaacatacaccgatcaagaatctatgtcaaggccgggggtcaatgaagagttt
tgcaagcctaaccggggaagtgttctaaggatgaagaatcttaattataataaactggat
gatgacgggctcataaacccagggacgagggtcaccggagatgatgttcttattggaaag
ataacgcctatattggatcccgagaggagtactaaggagacgcctgtctatgtctacaaa
gatagcagcactgcaatgcgtaggacagaaacggggattgttgatacggttattgtcaca
aacaaggatggttacaagttctccaaggtcaaggtaagatcaggaaggattcctcagatg
ggagacaagtttgcatccaggcatgctcaaaagggaactattggaatcactttgaggcaa
gaggatatgccgttcacctctgatggaatagttccagatataattataaatcctcatgct
attcctagtcgtatgaccatcggacacttgattgagtgcctgctcggtaaggttagtgca
atgagtggggaggaaggtgatgcaacaccatttagcggaatgagtgttaacgagatatct
gcaaggctgaaatcttacggttttcagcaaagagggctggaagtcatgtataatggaatg
acagggaggaagctccgagcccaaatattctttggcccaacgtattaccagagacttaag
cacatggttgatgataagatacatgcaagagcgcgtgggcctcttcagatactcacgagg
cagcctgttgaaggaagatccagggacggagggcttcgatttggagaaatggagagagac
tgtataatttctcacggtgcctccgcctttctaaaggaaaggttgatggatgtgagcgat
gcatattcttgctatgtttgtaatatttgcggacttcttgcaatggggggaagtaaggtg
aatgaatgtaaaggatgcagcaacactacaaatgttagtatagtggagattccgtatgca
ttcaaactcttgattcaggaactaatgggaatgaatattgcacccaggattcgctttgaa
gaataa
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integrated database retrieval system