Emiliania huxleyi: EMIHUDRAFT_232467
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Entry
EMIHUDRAFT_232467 CDS
T02915
Name
(RefSeq) hypothetical protein
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
ehx
Emiliania huxleyi
Brite
KEGG Orthology (KO) [BR:
ehx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ehx03019
]
EMIHUDRAFT_232467
03041 Spliceosome [BR:
ehx03041
]
EMIHUDRAFT_232467
03036 Chromosome and associated proteins [BR:
ehx03036
]
EMIHUDRAFT_232467
Enzymes [BR:
ehx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
EMIHUDRAFT_232467
Messenger RNA biogenesis [BR:
ehx03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
EMIHUDRAFT_232467
mRNA cycle factors
Common to processing body (P body) and stress granule
EMIHUDRAFT_232467
Spliceosome [BR:
ehx03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
EMIHUDRAFT_232467
Chromosome and associated proteins [BR:
ehx03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
EMIHUDRAFT_232467
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Motif
Other DBs
NCBI-GeneID:
17275948
NCBI-ProteinID:
XP_005783105
JGI:
Emihu1_232467
UniProt:
R1F5U8
LinkDB
All DBs
Position
Unknown
AA seq
467 aa
AA seq
DB search
MIGIGAPSRKVLILTPEEAPLSSEFFLFRGPATVSSSLSDSVAITDGDPVPDSPGEDGSI
ASWLAWSTCRLIGVGEITMESAAPVFEVTSDSLVERVPTNVPITGWSASELPQLEERLRA
KLQNAGPPTPTQRHAVPVGLAGHDLIVNSCSHDVLALMLPLLSPLMADETVHAVASPTAN
GASSGDSAGGGGALSRPRALVIAPTRPLLAAAEECAASLTRGSGVRYAVAGGSAEWEETL
AALRVAGTSLVLGSPGRLLDLVGYLAVLALDQVACGRAGGGEAGLSHETRGLCSLLAPGR
TLLLMYIGLLVRASAIRVASSDAEQGALSSRLVTQRAVYAVDGGRMDKFAQIASSSGLVL
CVARQRQDCELLSFRLRDEGLPVADASAERLKPREREALLSSFASGEPSAPRPPHTHDQT
CGLRRGGHVGSVTTIVGDADSGDALCRVAAAMREARQEARRPAKPTA
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgattggcatcggggccccttcgcgcaaggtcctcatcctcactccggaggaggctccc
ctctcctctgagttcttcctcttccgcggccccgccaccgtctcgtcttctctgtccgat
tctgtcgccatcaccgacggcgatcccgtgcccgactccccgggcgaggacggcagtatt
gcgtcgtggctggcttggagcacttgcaggctcattggtgtgggcgaaatcacaatggag
tccgcggcaccggtattcgaggtgacatccgactcgctggtggagcgcgtgcccaccaac
gtgccaatcacgggctggagcgcgtcggagctcccgcagctggaagagcggctgcgggca
aagcttcagaacgccggcccaccgacgccgacgcagcggcacgcggtgccggtcggcctc
gccggccacgacctcatcgtcaacagctgctcgcacgacgtgctcgcgctgatgctgccg
ctcctctcgccgctgatggccgacgagaccgttcacgctgtggcctcgcccaccgcgaac
ggggcctcgagcggcgacagcgcgggcggtggcggcgcgctgagtcggcctcgcgcgctc
gtgatcgcgccgacgcgtccgctcctcgccgcggcggaggagtgcgccgcctccctcacg
cgaggctccggcgtacggtacgcggtcgcgggcgggtccgccgagtgggaggagacgctt
gccgcgctgcgcgtggcgggcaccagcctcgtcctcggctctcctggccggttgctcgac
ttggtcggctacctcgcggtgctagccctcgaccaggtggcttgcgggagggcgggagga
ggcgaggcggggctgtcgcacgagacgcgaggcttgtgctcgctgctcgcgccaggccgc
acactcttacttatgtacataggcctcctcgtccgcgcgtccgccatccgcgtggcgtct
tccgacgccgagcagggcgcgctctcctcgaggctggtgacgcagcgcgccgtctacgcg
gtcgacggcgggaggatggacaagttcgcccagatcgcgagcagctccggcctcgtcctt
tgcgtcgcgcggcagcggcaggactgcgagctcctctcctttcggctccgcgacgagggc
ttgcccgtggcggacgcgtctgcggagcggctcaagccgcgggagcgggaggcgctcctc
tcttccttcgccagcggcgagccgtctgcccctcgccctccgcacacgcacgaccagacg
tgcgggctgaggcgcggagggcacgtcggatccgtcaccacgatcgtgggcgacgcggac
agcggcgacgcgctgtgccgagtggcggcggcgatgcgggaggcgcggcaggaggcgcgg
cgacccgccaagccgaccgcgtaa
DBGET
integrated database retrieval system