Emiliania huxleyi: EMIHUDRAFT_557972
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Entry
EMIHUDRAFT_557972 CDS
T02915
Name
(RefSeq) hypothetical protein
KO
K10598
peptidyl-prolyl cis-trans isomerase-like 2 [EC:
5.2.1.8
]
Organism
ehx
Emiliania huxleyi
Pathway
ehx04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ehx00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
EMIHUDRAFT_557972
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ehx03041
]
EMIHUDRAFT_557972
03110 Chaperones and folding catalysts [BR:
ehx03110
]
EMIHUDRAFT_557972
04121 Ubiquitin system [BR:
ehx04121
]
EMIHUDRAFT_557972
Enzymes [BR:
ehx01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.8 peptidylprolyl isomerase
EMIHUDRAFT_557972
Spliceosome [BR:
ehx03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
EMIHUDRAFT_557972
Complex C
U4/U6.U5 tri-SnRNP related factors
EMIHUDRAFT_557972
Other splicing related proteins
Minor spliceosome components
Minor spliceosome associated proteins
EMIHUDRAFT_557972
Chaperones and folding catalysts [BR:
ehx03110
]
Protein folding catalysts
Peptidyl prolyl isomerase
Cyclophilin
EMIHUDRAFT_557972
Ubiquitin system [BR:
ehx04121
]
Ubiquitin ligases (E3)
U-box type E3
EMIHUDRAFT_557972
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pro_isomerase
Rtf2
zf-NOSIP
V-set_CD47
Motif
Other DBs
NCBI-GeneID:
17259631
NCBI-ProteinID:
XP_005765924
JGI:
Emihu1_557972
UniProt:
R1DG82
LinkDB
All DBs
Position
Unknown
AA seq
551 aa
AA seq
DB search
MGKKQHSKDQLYITQTEWKKDWGGAKSNKHIPYKVLPFDCCAISLRPFEGSPMCTADGVV
FDLLNIVPYLKKYRRHPVTGGPLAASDLIKLNFHKNSEGKYHCPVMFKVFNQHTHIVAIR
QTGNVFSHEAVKELNLKARSMRDLIDGTPFGKSDIITIQDPSDGSAREIGHFSHVVEGLD
VDHKAGAGVRHNDATARILGKLSSTAAEAAAASAAAASTALTKATGKAPAEGAPSSSRLE
PASKFAKPAAASAAPRWLQTTGEHSAGFTSTALTPVTSNAIAELSEAEASRQRYAFLKKK
KYAQLQTSHGALNLELHADSVPMTCENFLGLAEKGYYDGLAFHRLLRNFMVQGGDPTGSG
SGGVSLWGKPFRDEISNKLRHEGRGVVSMANSGPDSNGSQFFITFKSAAHLDGKHTVFGR
VVGGFDALTRIEAVKTDKEDRPTQAVSISGVNVLVNPFDNLDAEMAEAHEREADPAAAAA
EEKAKRAAEDAQAWYNGPVERPKQLREGVGKYIAAEHLRYGAPAAPPAEGQAAPPKKKLK
GSGGFSDFSAW
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atggggaagaagcagcactcaaaggaccagctgtacatcacccagacagagtggaaaaag
gactggggcggcgccaagtcgaacaagcacatcccctacaaggtgctccccttcgactgc
tgcgccatctcactgcggccgttcgaaggctctcccatgtgcaccgccgacggcgtcgtg
tttgacctcctcaacatcgtcccatacctgaaaaagtaccggcgccacccagtgacgggc
ggccctctggccgcgtcggacctgatcaagctcaactttcacaagaactcggagggcaag
taccactgcccggtcatgttcaaggtcttcaaccagcacacgcacatcgtcgccatccgc
cagaccggcaacgtcttttcgcacgaggctgtcaaggagctcaacctcaaggcaaggtcg
atgcgcgacctcatcgacggcacgcccttcggcaagagcgacatcatcaccatccaggac
ccctcggacgggagtgcgcgcgagatcggccacttctcccacgtcgtcgaggggctcgat
gtcgaccacaaggcgggcgcgggcgtgcggcacaacgacgcgacggcgcgcatcctcggg
aagctctcctcgacggcggcggaggcggcggcggcgtcggcggcggccgcctcgacggcg
ctcaccaaggcgacgggcaaggcgcccgccgagggcgcgccctcctcctcccggctcgag
cccgcctcaaagtttgccaagccggcggccgcgtcggcggccccgcgctggctgcagacg
acgggagagcactcggcgggcttcacttcgacggcgctcacgccggtcacctcgaacgcg
atcgccgagctctccgaggcggaggcgtcgaggcagcgctacgccttcctcaagaagaag
aagtacgcgcagctgcagacgtcgcacggcgcgctcaacctcgagctgcacgccgactcc
gtcccgatgacgtgcgagaacttcctcggactcgccgagaaggggtactacgacggcctc
gcgttccaccggctgcttcgcaacttcatggtgcagggcggcgacccgacgggctcgggg
tcgggcggcgtgtcgctgtgggggaagcccttccgcgacgagatctcgaacaagctgcgc
cacgaggggcgcggcgtcgtctcgatggccaactcggggcccgactcgaacggctcccag
ttcttcatcaccttcaagtcggcggcgcacctcgacggtaagcacaccgtcttcggccgg
gtcgtcggaggcttcgacgcgctcacgcggatcgaggcggtcaagacggacaaggaggac
cggcccacccaggcggtctccatcagcggagtcaacgtcctcgtcaacccctttgacaac
ctcgacgccgagatggcggaggcgcacgagagggaggcggacccggccgccgccgcagcc
gaggagaaggcgaagcgcgccgccgaggacgcgcaggcgtggtacaacggcccggtggag
cggccgaagcagctgcgcgagggggtgggcaagtacatcgccgcagagcacctgcgatac
ggcgcgccggcggcgccgcccgccgaggggcaagccgcgccgccaaagaagaagctcaaa
ggcagcggcggcttctccgacttttccgcatggtga
DBGET
integrated database retrieval system
