Erysipelothrix inopinata: H9L01_01750
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Entry
H9L01_01750 CDS
T06822
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
eio
Erysipelothrix inopinata
Pathway
eio03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
eio00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
H9L01_01750
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
eio03021
]
H9L01_01750
03400 DNA repair and recombination proteins [BR:
eio03400
]
H9L01_01750
Enzymes [BR:
eio01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
H9L01_01750
Transcription machinery [BR:
eio03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
H9L01_01750
DNA repair and recombination proteins [BR:
eio03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
H9L01_01750
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_1
RNA_pol_Rpb2_45
RNA_pol_Rpb2_2
Motif
Other DBs
NCBI-ProteinID:
QNN61112
UniProt:
A0A7G9RZT7
LinkDB
All DBs
Position
complement(342709..346860)
Genome browser
AA seq
1383 aa
AA seq
DB search
MEKNQVYKVKKFGNKATRRDYSQVSGGLELPNLVEIQTEAYEWFKNEGLREVFDEIYPIQ
SYNENVKLKFINYSFDEPKYDVDECRSREANYAAPLRALMRLEIVNKQTGEVIEKDEEVF
LGDLPLMTETGTFIINGAERVIVSQIVRSPGAYFKSETDEKTGRETYLSELIPSRGTWLE
FMSDDRKAANGRVVNMKVDRKRTIVSTILFKAFGMSLDLQEGEDAFDTHSFKTFLRALDL
PVHEEWDELDSEKREFLSLYALLYTAFFGNYQELVDTLVLDKTVTFEDSLRVMYENQRAD
EIPTTDGAINLMNAKFLDPRRYDLNKAGRFKIHKKLEVFNRVKDTRLVNDVLDINGNVVF
EKGTLISKRDDVLKLRDVLREAGNVNAFPLKNIFSAPDTRTLTVDHTVHLDGRILARDID
HDNFEYERGTVLTTADLKTLMGHEITIYTGIIAKAVTLTKDNVWSVLNYGSRLYTFGRLQ
TADGSDLMSAKSTFVVDRFVPNVNVPHINKTNEKLIIETLDKEPLTLWLIGAAMQEIHVY
PDELSDEIVKIVGIDPLLDKTTIVASDIYATYSYFLNFLDDVGSEDDIDQLGNRRIRTVG
ELIQNQFRIGLSRMERVVKERMSISSDSSSLTPKNLTNIRPLTAMVKEFFSSSQLSQFMD
QLNPLAELTNKRRISALGPGGLTRDRAGFEVRDVHTSHYGRICPIETPEGPNIGLISNLT
TYGRLDPYGFIQTPYRIVKEGGDVTEEIVYLSADDEFDYVIAQANEVIDHKLANEQVVVR
YQGENILASRDRVELVDVSPQQIVSVATAAIPFLENDDASRALMGANMQRQAVPLLQPNS
PYVGTGIEHRIAKDSGSAVICKEDGMVSYVDGNHVVVTGVDGKERNYLLQKFRRSNQGMC
INQKPIVSLGESVVAGDILADGPSMQNGELALGQNVTVAFMTWNGYNYEDAIIMSERLVK
EDVYTSIHIEEYTLEVRETKLGPEEITRDIPNVSEISCRHLDARGIVMIGAEVKEGDILV
GKVTPKGQSEISPEEKLLLAIFGEKSREVRDNSLKVPHGGSGIVQDIKIFRRDEGHDLPP
GVSETVKVYIVQKRKISEGDKMAGRHGNKGVISRILPVEDMPYMEDGTPVDIMLNPLGVP
SRMNIGQILELHLGIAAKNLGIKFATSVFDGIETDELFRIMEEGNIDPDGKRVLYDGRTG
ERYDERISVGVMYMLKLSHMIDDKLHARATGPYSLVTQQPLGGKAQNGGQRFGEMEVWAL
YAYGAAHTLQEILTIKSDDVNGRTKTYAAIQNGEDIPEPSIPEAFRVLKHELQALALDIK
FLDKDDQEITATLVEEDQNAPRREADKEDEIVEEIVVELDEDVDEDDLQSDELDAGDDSS
EEI
NT seq
4152 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaaaaccaagtatataaagtgaagaaatttggtaacaaagctacccgtagagac
tactctcaagtaagtggtggattagaattacctaatttggttgaaattcaaacggaagcc
tatgaatggtttaaaaacgaaggactgagagaagtcttcgatgagatctatcctattcaa
agctataatgaaaatgttaagttgaaatttattaactattcatttgatgaaccgaaatat
gatgttgatgaatgtcgttctcgcgaggcaaattatgccgcgcctttacgtgctctcatg
cgtttggaaattgttaacaaacaaacgggtgaggtaattgaaaaagacgaggaagtattc
ctcggtgatttaccattaatgactgaaacgggaacgtttattattaatggtgctgaacgt
gttattgtttcacaaattgttcgttcacctggagcatattttaaatctgagacagatgaa
aagacaggtagagaaacatacctttcagaattaattccaagtcgtggtacatggcttgaa
tttatgagtgatgatcgtaaagcggcaaatggtcgtgttgtgaacatgaaagttgaccgt
aaacgtacgattgtttctactattttatttaaggcatttggaatgagtcttgaccttcaa
gaaggtgaagatgcttttgatacgcactcatttaaaacattcttacgtgcacttgattta
ccagtacatgaagaatgggatgagttggacagtgaaaagcgtgaattcttatcgttatat
gcactcctttatactgctttctttggtaactaccaagagcttgttgatacattagttctt
gataaaacagttacttttgaagactcattaagagttatgtatgaaaaccaacgcgcagac
gaaattcctactacagacggtgcgattaacttaatgaatgctaaattcttagatccacgt
cgttatgacttgaataaagcaggtcgttttaaaatacataaaaaattagaagtatttaac
cgtgttaaagatacacgtcttgtaaacgatgttcttgatatcaatggcaatgttgtcttt
gaaaaaggaacactcatttctaaacgtgatgatgtcttaaaattacgtgatgtattacgt
gaagcaggaaatgttaatgctttcccattgaagaacattttctcagcaccagatactcgt
acacttacagttgatcatactgttcatttagatggacgtattcttgctcgtgatattgat
catgacaattttgaatacgaacgtggaactgtattaacaactgcagacttaaaaacatta
atgggacatgaaattacaatctatacaggtattattgctaaagcagttactttaacaaaa
gataacgtatggtctgtattgaactatggttcacgtctttatacatttggtcgtttacaa
acagcagatggttctgacttaatgtcagctaagagtacctttgttgttgatcgtttcgta
ccaaacgtgaacgtacctcacattaataaaacaaatgaaaaacttattatcgaaacattg
gataaagaaccattaacactttggttaattggtgcagcaatgcaagaaatccatgtatat
cctgatgagttaagtgatgaaatcgttaagattgttggtattgatccacttcttgataaa
acaacgattgttgcatcagatatctatgcaacatactcatacttcctaaacttcttagat
gatgttggaagcgaagatgatattgaccaattaggtaaccgtcgtattcgtacagtgggt
gaattaattcaaaaccaattccgaatcggattaagccgtatggaacgtgttgttaaagaa
agaatgtcaatctcttcagattcatccagtttaacaccaaaaaaccttacaaatattcgt
ccgttaacggcaatggttaaagagttcttctcttcatctcaattatctcaatttatggat
caattgaaccctcttgcagagcttacgaacaaacgtcgtatctcagcgctaggacctggt
ggattgactcgtgaccgtgctggatttgaagtgcgtgacgttcatacatcacactatggc
cgtatttgtccaattgaaacacctgaaggaccgaacattggtcttatctctaacttaacg
acatatggtcgtcttgatccttatggattcatccaaacaccataccgtattgttaaagaa
ggtggggatgttactgaagaaatcgtttatctatcagctgatgatgaatttgattatgtt
attgctcaagcaaacgaagttattgatcacaaactagcgaatgaacaagttgttgttcgt
taccaaggtgaaaatatacttgcttcacgtgaccgcgttgaacttgtagacgttagtcca
caacaaatcgtttcggttgctactgcagcgattccattcttggaaaatgatgatgcttct
cgtgcgcttatgggtgccaacatgcaacgtcaagctgttccattgctacaaccaaactca
ccttatgttggtacaggtattgaacaccgtatcgctaaggactccggttcagcagtaatc
tgtaaagaagatggaatggtatcatacgttgacggtaaccacgttgttgttacaggtgtt
gatggaaaagaacgtaattacttattacaaaaattccgtcgttcaaaccaaggtatgtgt
attaaccaaaaaccaatcgtaagcttaggtgaatctgttgttgcaggagatattcttgct
gatggaccatcaatgcaaaatggtgagttagcattaggtcaaaacgttactgtcgcattt
atgacatggaacggttataactatgaagatgctatcatcatgagtgaacgtcttgttaaa
gaagatgtttatacttcaatccatattgaagagtacacactcgaagttcgtgaaacaaaa
ctcggacctgaagaaatcacacgtgatatacctaacgtaagtgaaatctcatgccgtcat
ttagatgctcgtggtatcgtaatgattggtgctgaagttaaagaaggcgatattttagtt
ggtaaggttacacctaaaggccaaagtgaaatttcacctgaagaaaaacttcttctcgca
atcttcggagagaaatctcgtgaagttcgtgataactcacttaaagttccacatggtgga
tcaggtattgttcaagatattaaaatattccgccgtgatgaaggtcatgaccttccacca
ggagtaagtgaaacagttaaagtttatatcgttcagaaacgtaagatttctgaaggggat
aagatggctggacgtcacggtaataaaggggttatctctcgtatattaccagtagaagat
atgccatatatggaagacggaacacctgttgatattatgcttaaccctcttggggttcct
agccgtatgaacattggacaaattcttgaactccatttaggtattgctgctaagaactta
ggaattaagtttgcaaccagcgtatttgatggtattgaaactgatgaactcttccgtatc
atggaagaaggtaatattgatcctgatggaaaacgtgtactctatgatggccgtacaggg
gaacgttatgatgaacgtatttctgtaggggtaatgtacatgttgaaactatcccacatg
atcgatgataaacttcatgctcgtgcaacaggaccttattcacttgttacacaacaacca
ttgggtggtaaagcacaaaatggtggacaaagatttggtgagatggaggtttgggcattg
tatgcttatggtgcagctcatacacttcaagaaattcttacaatcaaatctgatgatgtc
aacggacgtactaagacttatgctgcaattcaaaatggtgaggatattccagaaccaagt
attccagaagcatttagagttctgaaacatgaattacaagcattggcacttgatattaaa
ttcttagataaagatgatcaagaaattactgcaacacttgtcgaggaggatcaaaacgct
cctcgacgtgaagcagacaaagaagatgaaatcgtagaagaaattgtagttgaacttgac
gaagacgttgatgaagacgacttacaatccgatgaacttgatgctggagatgattccagc
gaagaaatttag
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