Enterobacter kobei DSM 13645: BFV64_06635
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Entry
BFV64_06635 CDS
T04686
Name
(GenBank) ATP-dependent RNA helicase RhlE
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
ekb
Enterobacter kobei DSM 13645
Pathway
ekb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ekb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BFV64_06635
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ekb03019
]
BFV64_06635
Enzymes [BR:
ekb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
BFV64_06635
Messenger RNA biogenesis [BR:
ekb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
BFV64_06635
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
UTP25
UvrD-helicase
P-loop_SecA
DUF6482
Motif
Other DBs
NCBI-ProteinID:
AOP86046
LinkDB
All DBs
Position
1394701..1396065
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AA seq
454 aa
AA seq
DB search
MSFDSLGLNPEILRAIAEQGYVEPTPIQQQAIPAVLQGRDLMASAQTGTGKTAGFTLPLL
ELLVKNQPHAKGRRPVRALILTPTRELAAQIGENVRDYSRYLNIRSLVVFGGVSINPQMM
KLRGGVDVLVATPGRLLDLEHQNAVKLDQIEILVLDEADRMLDMGFIHDIRRVLAKLPAR
RQNLLFSATFSDEIKALAEKLLHNPLEVEVARRNTASEQVTQHVHFVDKKRKRELLSQMI
GQGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLV
ATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDI
ERLLKKEIPRIETPGYEVDPSIKAEPIQNGRQGGGGRGQQPRRAEGGAPKSSGKPPRRNN
DSKPAGESPWRSGEGKPAGEGQRRRRPRKPANPQ
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atgtcttttgattcccttggcctgaacccggaaattctgcgtgccatcgcagagcagggc
tacgttgagccaacccccatccagcagcaggcgatccccgccgttcttcaggggcgtgac
ctgatggccagcgcccagaccggcaccggtaaaaccgcgggctttacgctgccgctgtta
gagctgctggtaaaaaaccagccgcacgccaaaggccgtcgtccggttcgtgcgctgatc
ctgaccccaacccgtgagctggcggcgcagattggtgagaatgtgcgtgactacagccgc
tatctcaacattcgctcgctggtcgttttcggtggcgtcagcattaacccacagatgatg
aagctgcgcggcggcgtggacgtgctggtggcaacgccgggccgtctgctggatctcgaa
caccagaacgcggtgaagctcgatcagattgaaattctggtgctggacgaagccgaccgc
atgctcgacatgggctttatccacgacatccgtcgcgtgctggccaagctgcctgcgcgt
cgtcagaacctgctgttctctgccaccttctccgacgagatcaaggcgctggcagaaaag
ctgctgcataacccgctggaagtggaagtggcgcgtcgcaacaccgcctctgagcaggtg
acacagcacgttcactttgttgataaaaagcgtaagcgggagctgctctcccagatgatc
ggccagggtaactggcagcaggtgctggtctttacccgcaccaagcacggtgcgaaccac
ctggcggaacagctcaataaagacggtatccgcagtgccgccatccacggtaacaagagc
cagggtgcgcgtacccgtgcgctggcggacttcaaatctggcgacatccgcgtgctggtg
gcaaccgacatcgccgcgcgtggtctggacattgaagagctgccgcacgtagtaaactac
gagctgccaaacgtcccggaagattacgttcaccgtatcggtcgtaccggccgcgcggcg
gcaaccggtgaagcgctgtcactggtctgcgtcgatgaacacaagctgctgcgcgacatc
gaacgtctgctgaagaaagagatcccacgcatcgaaaccccgggctacgaagtggatccg
tccatcaaggcggagccgattcagaacggtcgccagggcggcggtggtcgcggtcagcag
ccgcgtcgtgctgaaggcggcgcgccgaaatcatccggcaaacccccgcgtcgcaacaac
gacagcaaaccggccggtgaaagtccgtggcgcagcggtgaagggaaaccggcaggggaa
gggcagcgtcgacgccgcccgcgtaaacctgctaacccgcagtaa
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