Escherichia coli KO11FL: KO11_04400
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Entry
KO11_04400 CDS
T02104
Name
(GenBank) UvrD/REP helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ekf
Escherichia coli KO11FL
Pathway
ekf03420
Nucleotide excision repair
ekf03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ekf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
KO11_04400
03430 Mismatch repair
KO11_04400
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ekf03400
]
KO11_04400
Enzymes [BR:
ekf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
KO11_04400
DNA repair and recombination proteins [BR:
ekf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
KO11_04400
MMR (mismatch excision repair)
Other MMR factors
KO11_04400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
UvrD_C
Viral_helicase1
UvrD_C_2
AAA_22
AAA_30
Zeta_toxin
AAA_18
Motif
Other DBs
NCBI-ProteinID:
AFH15866
LinkDB
All DBs
Position
940790..942415
Genome browser
AA seq
541 aa
AA seq
DB search
MSIFSPTTQQRLAIDYPKSMVITACPGSGKTTVIKEKIRNITGCLPEHKGVIAITFTRKA
SSELERRCKADGHDIKHSFFGTIDSFCLKEIIIPFLPRIWGGKPTECKVLKKLDSPYKYY
LEEHFFGIPSVVNVNEDPGYKRLYDEGMLWMSSFAALALKILNESPAATRYIKARYSHIF
IDEYQDSSLSQHQLFLKINELGLCSIAVGDVWQSIYEFRGGNAELLLDLVRDKQVFAHFE
INLNHRCHPSIINYASRLLDPNFVLLPSENINVYRKRLSGNLKDVSMTISSWISKWLNEG
KWGLEHANQIAIFARKEQSLLLLCSGLTSTFRVYIDTPLDKLGTECSDLYKDLLAYRYKA
IGTAQELIDKVFDGLIINDNQQFLLRKKIKSLRAKLTDEELINKLHEIAEMLNIQFSISN
DNAVLDIISDDIYLKQFMPSDKNEVQVMTLHKSKGLEFKIVLHLDMDEWSFPYRTVNEVD
RNTALYPSLPQETNLHYVGITRAEKCCVLINAELRQNSTGAFKKSEASYFFKLPQLEGLY
R
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atgagcattttttcaccaaccactcagcaaagattagccattgattaccctaaaagcatg
gtaataacagcatgccctggtagcggtaaaactacagttataaaagagaaaattagaaat
attaccggttgtcttccggagcataaaggagtcattgctattactttcacaaggaaagca
agttcagaactggagcgcagatgtaaagccgatgggcacgatataaaacatagttttttt
ggtacgattgatagcttttgcttaaaggaaataatcattccatttcttcccagaatatgg
ggtggtaaaccaacagaatgtaaagtacttaaaaagctagattctccttataaatattac
ttagaggagcatttttttggaataccatcagtcgttaatgtcaatgaagatcccggctat
aagagactgtacgatgagggaatgctgtggatgagttcatttgctgccttagctttaaaa
atacttaatgaatctcctgcagcaacgcgatatatcaaagcaaggtatagccatatattt
atagatgaatatcaagattcatctttatctcagcatcaattatttctaaaaataaatgaa
cttggtttatgctctattgctgttggtgatgtttggcaatcaatttatgagtttcgaggc
ggaaatgctgaactgttacttgacttagttagagataagcaggtatttgcacattttgaa
ataaatttaaatcataggtgtcatccatcaataattaattatgcatctaggctactcgat
ccaaacttcgtgttattaccaagcgaaaatataaatgtttacagaaagagattatctggg
aacctaaaagatgtttcgatgacaatatcatcatggatttcaaaatggttaaatgaagga
aaatgggggttggagcatgctaaccaaatagctatttttgcaagaaaagagcaatcatta
ctattattatgctcaggattaacatcaacttttagagtttatattgatacgccattagat
aaattgggcacagaatgttcagatttatataaagaccttctagcgtataggtataaggct
ataggcactgcgcaagaattaattgataaagtatttgatggcttgattataaatgacaat
cagcagtttttattaagaaaaaaaattaaatccctcagggctaaattaacagatgaggaa
ctaattaataagctccacgaaatcgctgaaatgctaaatattcagttttctatatctaat
gataatgcagttttggatattatatcagacgatatttacttaaaacagtttatgccatca
gataaaaatgaagttcaagtaatgacacttcacaagtctaaaggacttgaatttaaaata
gtattgcatttggatatggatgaatggtcttttccatatagaacagtgaatgaagttgat
agaaacacagcactatatcctagccttccgcaagaaacaaaccttcattatgttggtatt
acaagagctgagaaatgctgcgtattaattaatgcagagttacgccaaaactcgactgga
gcatttaagaagtctgaggcatcttactttttcaagttgccccaactagagggtctttat
cgttag
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