Escherichia coli KO11FL: KO11_13145
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Entry
KO11_13145 CDS
T02104
Symbol
sdiA
Name
(GenBank) DNA-binding transcriptional activator SdiA
KO
K07782
LuxR family transcriptional regulator, quorum-sensing system regulator SdiA
Organism
ekf
Escherichia coli KO11FL
Pathway
ekf02020
Two-component system
ekf02024
Quorum sensing
ekf02026
Biofilm formation - Escherichia coli
Brite
KEGG Orthology (KO) [BR:
ekf00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
KO11_13145 (sdiA)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
KO11_13145 (sdiA)
02026 Biofilm formation - Escherichia coli
KO11_13145 (sdiA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ekf03000
]
KO11_13145 (sdiA)
Transcription factors [BR:
ekf03000
]
Prokaryotic type
Helix-turn-helix
LuxR family
KO11_13145 (sdiA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Autoind_bind
GerE
Sigma70_r4_2
HTH_20
Sigma70_r4
HTH_10
HTH_23
Motif
Other DBs
NCBI-ProteinID:
AFH17601
LinkDB
All DBs
Position
2812047..2812769
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AA seq
240 aa
AA seq
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MQDTDFFSWRRTMLLRFQRMEAAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFY
TNYPESWVSYYQAKNFLAIDPVLNPENFSQGHLMWNDDLFSEAQPLWEAARAHGLRRGVT
QYLMLPNRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEMNF
SKREKEILKWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
atgcaggatacggattttttcagctggcgtcgcacgatgctgttgcgttttcagaggatg
gaggccgcagaagaggtctaccatgaaatagagcttcaggctcagcagctggagtacgat
tactattcgttatgtgttcgccacccggtaccattcacgcgacctaaagtggctttctac
accaattaccctgagtcgtgggttagttattatcaggcaaaaaattttctcgcaattgat
ccggtgctgaaccctgaaaactttagtcagggccatttaatgtggaatgatgacttattc
agcgaagcacagccgttatgggaagccgcgcgcgcacatggtttacgccgcggtgtcact
cagtatttaatgctgccaaatcgggcgttgggctttttgtccttttcccgttgcagcgct
cgcgaaatacccattcttagtgatgaactgcaattaaaaatgcagttactggtgcgcgaa
agtctgatggctctgatgcgtttaaatgatgaaatagtgatgacgccagagatgaatttc
agcaagcgcgaaaaagaaattctgaaatggacggcggaagggaagacatcagcagagata
gcgatgattttgtcaatctctgagaatacggtcaatttccatcagaaaaacatgcagaaa
aaaatcaatgcaccaaataagacccaggtggcctgttacgcggccgctactggcttaatt
tga
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integrated database retrieval system
