Escherichia coli KO11FL: EKO11_1861
Help
Entry
EKO11_1861 CDS
T01718
Name
(GenBank) excinuclease ABC, C subunit
KO
K03703
excinuclease ABC subunit C
Organism
eko
Escherichia coli KO11FL
Pathway
eko03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
eko00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
EKO11_1861
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
eko03400
]
EKO11_1861
DNA repair and recombination proteins [BR:
eko03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
EKO11_1861
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrC_RNaseH_dom
HHH
GIY-YIG
UVR
HHH_5
HHH_3
HHH_2
Motif
Other DBs
NCBI-ProteinID:
ADX50478
LinkDB
All DBs
Position
1962510..1964342
Genome browser
AA seq
610 aa
AA seq
DB search
MSDQFDAKAFLKTVTSQPGVYRMYDAGGTVIYVGKAKDLKKRLSSYFRSNLASRKTEALV
AQIQQIDVTVTHTETEALLLEHNYIKLYQPRYNVLLRDDKSYPFIFLSGDTHPRLAMHRG
AKHAKGEYFGPFPNGYAVRETLALLQKIFPIRQCENSVYRNRSRPCLQYQIGRCLGPCVE
GLVSEEEYAQQVEYVRLFLSGKDDQVLTQLISRMETASQNLEFEEAARIRDQIQAVRRVT
EKQFVSNTGDDLDVIGVAFDAGMACVHVLFIRQGKVLGSRSYFPKVPGGTELSEVVETFV
GQFYLQGSQMRTLPGEILLDFNLSDKTLLADSLSELAGRKINVQTKPRGDRARYLKLART
NAATALTSKLSQQSTVHQRLTALASVLKLPEVKRMECFDISHTMGEQTVASCVVFDANGP
LRAEYRRYNITGITPGDDYAAMNQVLRRRYGKAIDDSKIPDVILIDGGKGQLAQAKNVFA
ELDVSWDKNHPLLLGVAKGADRKAGLETLFFEPEGEGFSLPPDSPALHVIQHIRDESHDH
AIGGHRKKRAKVKNTSSLETIEGVGPKRRQMLLKYMGGLQGLRNASVEEIAKVPGISQGL
AEKIFWSLKH
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
gtgagtgatcagtttgacgcaaaagcgtttttaaaaaccgtaaccagccagccaggcgtt
tatcgcatgtacgatgctggtggtacggttatctatgtcggcaaagcgaaagacctgaaa
aaacggctttccagctatttccgtagcaacctcgcttcgcgcaaaaccgaagcgctggtc
gcccagatccagcaaattgatgtaacggttactcacacagaaaccgaagcgctgttgctg
gaacacaactacatcaaactctatcagccgcgttacaacgttttgctacgcgatgataaa
tcatatccttttatcttcctgagtggtgatacccacccgcgtctggcgatgcatcgtggt
gcgaagcatgccaaaggtgaatatttcggcccgttcccgaatggctatgccgtacgtgaa
actctggcgctactgcaaaagattttccccattcgccagtgcgaaaatagtgtttatcgc
aatcgctcgcgtccgtgtctgcaataccagatagggcgctgtctgggaccgtgcgttgaa
ggactggtgagtgaagaagaatacgctcagcaggtcgagtatgtgcgcctgtttttgtct
ggcaaagatgatcaggtgcttacgcaactcattagtcgtatggaaactgccagccagaat
ctggagtttgaagaagctgcacgtattcgcgaccaaattcaggcggtgcgacgcgtcacc
gaaaaacaattcgtttccaataccggcgacgacctcgacgttattggtgtggcgttcgat
gcgggcatggcttgtgtccacgtattgttcattcgtcagggcaaagtgctcggcagccgc
agctatttcccgaaagtgcctggcggtacggaactgagcgaggtggtagaaaccttcgta
ggccagttctatttacaaggcagccagatgcgcaccttaccgggtgagatcctgctcgat
tttaatcttagcgataaaacgctgctcgccgattccctttcagaactggcgggacgcaag
attaatgttcaaaccaaacctcgcggcgatagggcgcgttatctgaaactcgcgcgcacc
aatgcggcgacggccttaaccagcaaactttcgcagcaatctaccgttcaccagcgactg
accgcgcttgccagcgtgttgaaattgccggaagtgaagcggatggagtgctttgacatc
agccataccatgggcgaacaaaccgtcgcttcctgtgtggtgtttgatgctaacggcccg
ctgcgtgcggagtatcggcgctataacattacaggcatcacgccgggcgatgattatgcg
gcgatgaatcaggtgctgcgtcggcgttatggtaaagccattgacgacagtaagatcccg
gatgtgatccttatcgacggcggcaaaggccagcttgcgcaggcgaaaaatgtcttcgcc
gaactggatgtctcatgggataaaaatcatccgctgctacttggcgttgccaaaggagca
gatcgtaaggctgggctggaaacgctgttctttgagccggaaggtgagggattcagtttg
ccgccagattctcccgcgctgcatgttatccagcatattcgcgatgaatcacatgatcac
gcgattggcgggcaccgtaaaaaacgggcgaaggtcaaaaataccagttccctggaaacc
attgaaggcgtcgggccaaaacgccggcaaatgttgttgaaatatatgggcggtttgcaa
ggtttacgtaacgccagcgtcgaggaaattgcaaaagtgccgggtatttcgcaaggtctg
gcagaaaagatcttctggtcgttgaaacattga
DBGET
integrated database retrieval system
