KEGG   Escherichia coli clone D i14: i14_3997Help
Entry
i14_3997          CDS       T02003                                 

Gene name
gadA
Definition
(GenBank) glutamate decarboxylase alpha
  KO
K01580  glutamate decarboxylase [EC:4.1.1.15]
Organism
elc  Escherichia coli clone D i14
Pathway
elc00250  Alanine, aspartate and glutamate metabolism
elc00410  beta-Alanine metabolism
elc00430  Taurine and hypotaurine metabolism
elc00650  Butanoate metabolism
elc01100  Metabolic pathways
elc01110  Biosynthesis of secondary metabolites
elc01120  Microbial metabolism in diverse environments
elc02024  Quorum sensing
Module
elc_M00027  GABA (gamma-Aminobutyrate) shunt
Brite
KEGG Orthology (KO) [BR:elc00001]
 Metabolism
  Carbohydrate metabolism
   00650 Butanoate metabolism
    i14_3997 (gadA)
  Amino acid metabolism
   00250 Alanine, aspartate and glutamate metabolism
    i14_3997 (gadA)
  Metabolism of other amino acids
   00410 beta-Alanine metabolism
    i14_3997 (gadA)
   00430 Taurine and hypotaurine metabolism
    i14_3997 (gadA)
 Cellular Processes
  Cellular community - prokaryotes
   02024 Quorum sensing
    i14_3997 (gadA)
Enzymes [BR:elc01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.1  Carboxy-lyases
    4.1.1.15  glutamate decarboxylase
     i14_3997 (gadA)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: Pyridoxal_deC Aminotran_5
Motif
Other DBs
NCBI-ProteinID: AER91443
LinkDB All DBs
Structure
PDB: 

Position
complement(3975976..3977439)
Genome map
AA seq 487 aa AA seqDB search
MLPLRINPTFLLPSNKFKEFEMDQKLLTDFRSELLDSRFGAKAISTIAESKRFPLHEMRD
DVAFQIINDELYLDGNARQNLATFCQTWDDENVHKLMDLSINKNWIDKEEYPQSAAIDLR
CVNMVADLWHAPAPKNGQAVGTNTIGSSEACMLGGMAMKWRWRKRMEAAGKPTDKPNLVC
GPVQICWHKFARYWDVELREIPMRPGQLFMDPKRMIEACDENTIGVVPTFGVTYTGNYEF
PQPLHDALDKFQADTGIDIDMHIDAASGGFLAPFVAPDIVWDFRLPRVKSISASGHKFGL
APLGCGWVIWRDEEALPQELVFNVDYLGGQIGTFAINFSRPAGQVIAQYYEFLRLGREGY
TKVQNASYQVAAYLADEIAKLGPYEFICTGRPDEGIPAVCFKLKDGEDPGYTLYDLSERL
RLRGWQVPAFTLGGEATDIVVMRIMCRRGFEMDFAELLLEDYKASLKYLSDHPKLQGIAQ
QNSFKHT
NT seq 1464 nt NT seq  +upstreamnt  +downstreamnt
ttgcttccattgcggataaatcctacttttttattgccttcaaataaatttaaggagttc
gaaatggaccagaagctgttaacggatttccgctcagaactactcgattcacgttttggc
gcaaaggccatttctactatcgcggagtcaaaacgatttccgctgcacgaaatgcgcgat
gatgttgcatttcagattatcaatgatgaattatatcttgatggcaacgctcgtcagaac
ctggccactttctgccagacctgggacgacgaaaacgtccataaattgatggatttgtcg
atcaataaaaactggatcgacaaagaagaatatccgcaatccgctgcaatcgacctgcgt
tgcgtaaacatggttgccgatctgtggcatgcgcctgcaccgaaaaatggtcaggccgtt
ggcaccaacaccattggttcttccgaggcctgtatgctcggcgggatggcgatgaaatgg
cgttggcgcaagcgtatggaagccgcaggcaaaccaacggataaaccaaacctggtgtgc
ggtccggtacaaatctgctggcataaattcgcccgctactgggatgtggagttgcgtgag
atccctatgcgccccggtcagttgtttatggacccgaaacgcatgattgaagcctgcgac
gaaaataccatcggcgtggtgccgactttcggcgtgacctacaccggtaactatgagttc
ccgcagccgctgcacgatgcgctggataaattccaggccgacaccggtatcgacatcgac
atgcacatcgacgccgccagcggtggcttcctggcaccgttcgtcgccccggatatcgtc
tgggacttccgcctgccgcgtgtgaaatcgatcagtgcttcaggccataaattcggtctg
gctccgctgggctgcggctgggttatctggcgtgatgaagaagcgctgccgcaggaactg
gtgttcaacgttgactacctcggcggtcagattggtactttcgccatcaacttctcccgc
ccggcgggtcaggtgattgcacagtactatgaattcctgcgcctcggtcgtgaaggctat
accaaagtacagaacgcttcctaccaggttgccgcttatctggcggatgaaatcgccaaa
ctggggccgtatgagttcatctgtaccggtcgcccggacgaaggcatcccggcggtttgc
ttcaaactgaaagatggtgaagatccaggatacaccctgtacgacctctctgaacgtctg
cgtctgcgcggctggcaggttccggccttcactctcggcggtgaagccaccgacatcgtg
gtgatgcgcattatgtgtcgtcgcggcttcgaaatggactttgctgaactgttgctggaa
gactacaaagcctccctgaaatatctcagcgaccacccgaaactgcagggtattgcccag
cagaacagctttaaacacacctga

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