Escherichia coli clone D i2: i02_1571
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Entry
i02_1571 CDS
T02004
Symbol
topA
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
eld
Escherichia coli clone D i2
Brite
KEGG Orthology (KO) [BR:
eld00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
eld03032
]
i02_1571 (topA)
03400 DNA repair and recombination proteins [BR:
eld03400
]
i02_1571 (topA)
Enzymes [BR:
eld01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
i02_1571 (topA)
DNA replication proteins [BR:
eld03032
]
Prokaryotic type
DNA Topoisomerases
i02_1571 (topA)
DNA repair and recombination proteins [BR:
eld03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
i02_1571 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Topo_Zn_Ribbon
TOP1_ZnF
Toprim
zf-C4_Topoisom
Zn_ribbon_recom
Toprim_4
DUF1722
DUF4795
Motif
Other DBs
NCBI-ProteinID:
AER84147
LinkDB
All DBs
Position
1518883..1521522
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AA seq
879 aa
AA seq
DB search
MRRIPGRIKLGKVNMGKALVIVESPAKAKTINKYLGSDYVVKSSVGHIRDLPTSGSTAKK
SADSTSTKTAKKPKKDERGALVNRMGVDPWHNWEAHYEVLPGKEKVVSELKQLAEKADHI
YLATDLDREGEAIAWHLREVIGGDDARYSRVVFNEITKNAIRQAFNKPGELNIDRVNAQQ
ARRFMDRVVGYMVSPLLWKKIARGLSAGRVQSVAVRLVVEREREIKAFVPEEFWEVDAST
TTPSGEALALQVTHQNDKPFRPVNKEQTQAAVSLLEKARYSVLEREDKPTTSKPGAPFIT
STLQQAASTRLGFGVKKTMMMAQRLYEAGYITYMRTDSTNLSQDAVNMVRGYISDNFGKK
YLPESPNQYASKENSQEAHEAIRPSDVNVMAESLKDMEADAQKLYQLIWRQFVACQMTPA
KYDSTTLTVGAGDFRLKARGRILRFDGWTKVMPALRKGDEDRILPAVDKGDALTLVELTP
AQHFTKPPARFSEASLVKELEKRGIGRPSTYASIISTIQDRGYVRVENRRFYAEKMGEIV
TDRLEENFRELMNYDFTAQMENSLDQVANHEAEWKAVLDHFFSDFTQQLDKAEKDPEEGG
MRPNQMVLTSIDCPTCGRKMGIRTASTGVFLGCSGYALPPKERCKTTINLVPENEVLNVL
EGEDAETNALRAKRRCPKCGTAMDSYLIDPKRKLHVCGNNPTCDGYEIEEGEFRIKGYDG
PIVECEKCGSEMHLKMGRFGKYMACTNEECKNTRKILRNGEVAPPKEDPVPLPELPCEKS
DAYFVLRDGAAGVFLAANTFPKSRETRAPLVEELYRFRDRLPEKLRYLADAPQQDPEGNK
TMVRFSRKTKQQYVSSEKDGKATGWSAFYVDGKWVEGKK
NT seq
2640 nt
NT seq
+upstream
nt +downstream
nt
gtgcgacgcattcctggaagaatcaaattaggtaaggtgaatatgggtaaagctcttgtc
atcgttgagtccccggcaaaagccaaaacgatcaacaagtatctgggtagtgactacgtg
gtgaaatccagcgtcggtcacatccgcgatttgccgaccagtggctcaactgccaaaaag
agtgccgactctacctccaccaagacggctaaaaagcctaaaaaggatgaacgtggcgct
ctcgtcaaccgtatgggggttgacccgtggcacaattgggaggcgcactatgaagtgttg
cctggtaaagagaaggtcgtctctgaactgaaacaactggctgaaaaagccgaccacatc
tatctcgcaaccgaccttgaccgcgaaggggaagccattgcatggcacctgcgggaagtg
attggtggtgatgatgcgcgctatagccgagtggtgtttaacgaaattactaaaaacgcg
atccgccaggcatttaacaaaccgggtgaactgaatattgatcgtgttaatgcccagcag
gcgcgtcgctttatggaccgcgtggtggggtatatggtttcgccgcttctatggaaaaag
atcgctcgtggtctgtctgccggtcgtgtgcagtcggtggcggtccgcctggtggtcgag
cgtgagcgtgaaattaaagcgttcgtaccggaagagttctgggaagtcgatgccagcacg
accacgccatctggtgaagcgttggcgttgcaggtgactcatcagaacgacaaaccgttc
cgtccggtcaacaaagaacaaactcaggctgcggtaagtctgctggaaaaagcgcgctac
agcgtgctggaacgtgaagacaaaccgacaaccagtaaacctggcgctccttttattacc
tctacgctgcaacaagctgccagcacccgtcttggttttggcgtgaaaaaaaccatgatg
atggcgcagcgtttgtatgaagcaggctatatcacttacatgcgtaccgactctaccaac
ctgagtcaggacgcggtaaatatggttcgcggttatatcagcgataattttggtaagaaa
tatctgccggaaagtccgaatcagtacgccagcaaagaaaactcacaggaagcgcacgaa
gcgattcgtccttctgacgtcaatgtgatggcggaatcgttgaaggatatggaagcagat
gcgcagaaactgtaccagttaatctggcgtcagttcgtagcctgccagatgaccccagcg
aaatatgactccacgacgctgaccgttggtgcgggcgatttccgcctgaaagcacgcggt
cgtattttgcgctttgatggctggacgaaagtgatgcctgcactgcgtaaaggcgatgaa
gatcgtatcttaccggcagtcgataaaggcgatgctctgacgctcgttgaactgacacca
gcccagcactttaccaagcctccagcccgtttcagtgaagcatcgctggtcaaagagctg
gaaaaacgcggtatcggtcgtccttctacctatgcgtcgatcatttcgactattcaggat
cgtggctatgtgcgagtagaaaatcgtcgtttctatgcggaaaaaatgggcgaaatcgtc
accgatcgcctggaagagaatttccgcgagttaatgaactacgatttcaccgcgcagatg
gaaaacagcctcgaccaggtggcaaatcacgaagcagagtggaaagctgtactggatcac
ttcttctcggatttcacccagcagttagataaagctgaaaaagatccggaagagggtggt
atgcgcccgaaccagatggttctgaccagcattgactgcccgacttgtggtcgcaaaatg
gggattcgcacagcgagcaccggggtattccttggctgttctggctatgcgctgccgccg
aaagagcgttgcaaaaccaccattaacctggtgccggaaaacgaagtgctgaacgtgctg
gaaggtgaagacgctgaaaccaatgcgttgcgcgcaaaacgtcgttgcccgaaatgcggc
acggcgatggacagctatctcatcgatccgaaacgtaagttgcatgtctgtggtaataac
ccaacctgcgacggttacgagatcgaagagggtgaattccgcattaaaggttatgacggc
ccgatcgttgagtgtgaaaaatgtggctctgaaatgcacctgaaaatggggcgtttcggt
aaatacatggcctgcaccaacgaagagtgtaaaaacacacgtaagattttacgtaacggc
gaagtggcaccaccgaaagaagatccggtgccattaccggagctgccgtgcgaaaaatca
gatgcctatttcgtgttgcgtgacggtgctgccggtgtgttcctggcggccaataccttc
ccgaaatcgcgtgaaacgcgtgcgccgctggtggaggagctttatcgcttccgcgaccgt
ctgccggaaaaactgcgttatctggccgatgcgccacagcaggatccggaaggtaataag
accatggttcgctttagccgtaaaaccaaacagcaatatgtctcttcggaaaaagacgga
aaggcgactggctggtcagcattttatgttgatggcaaatgggttgaagggaaaaaataa
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