Escherichia coli clone D i2: i02_4214
Help
Entry
i02_4214 CDS
T02004
Symbol
gyrB
Name
(GenBank) DNA gyrase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
eld
Escherichia coli clone D i2
Brite
KEGG Orthology (KO) [BR:
eld00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
eld03032
]
i02_4214 (gyrB)
03400 DNA repair and recombination proteins [BR:
eld03400
]
i02_4214 (gyrB)
Enzymes [BR:
eld01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
i02_4214 (gyrB)
DNA replication proteins [BR:
eld03032
]
Prokaryotic type
DNA Topoisomerases
i02_4214 (gyrB)
DNA repair and recombination proteins [BR:
eld03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
i02_4214 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
GyrB_insert
DNA_gyraseB_C
GyrB_hook
Toprim
HATPase_c
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
AER86739
LinkDB
All DBs
Position
complement(4201374..4203791)
Genome browser
AA seq
805 aa
AA seq
DB search
MMSNSYDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDNAIDEALAGHCKEI
IVTIHADNSVSVQDDGRGIPTGIHPEEGVSAAEVIMTVLHAGGKFDDNSYKVSGGLHGVG
VSVVNALSQKLELVIQREGKIHRQIYEHGVPQAPLAVTGETEKTGTMVRFWPSLETFTNV
TEFEYDILAKRLRELSFLNSGVSIRLRDKRDGKEDHFHYEGGIKAFVEYLNKNKTPIHPN
IFYFSTEKDGIGVEVALQWNDGFQENIYCFTNNIPQRDGGTHLAGFRAAMTRTLNAYMDK
EGYSKKAKVSATGDDAREGLIAVVSVKVPDPKFSSQTKDKLVSSEVKSAVEQQMNELLAE
YLLENPTDAKIVVGKIIDAARAREAARRAREMTRRKGALDLAGLPGKLADCQERDPALSE
LYLVEGDSAGGSAKQGRNRKNQAILPLKGKILNVEKARFDKMLSSQEVATLITALGCGIG
RDEYNPDKLRYHSIIIMTDADVDGSHIRTLLLTFFYRQMPEIVERGHVYIAQPPLYKVKK
GKQEQYIKDDEAMDQYQISIALDGATLHTNASAPALAGEALEKLVSEYNATQKMINRMER
RYPKAMLKELIYQPTLTEADLSDEQTVTRWVNALVSELNDKEQHGSQWKFDVHTNAEQNL
FEPIVRVRTHGVDTDYPLDHEFITGGEYRRICTLGEKLRGLLEEDAFIERGERRQPVASF
EQALDWLVKESRRGLSIQRYKGLGEMNPEQLWETTMDPESRRMLRVTVKDAIAADQLFTT
LMGDAVEPRRAFIEENALKAANIDI
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
ttgatgtcgaattcttatgactcctccagtatcaaagtcctgaaagggctggatgcggtg
cgtaagcgcccgggtatgtatatcggcgacacggatgacggcaccggtctgcaccacatg
gtattcgaggtggtagataacgctatcgacgaagcgctcgcgggtcactgtaaagaaatt
atcgtcaccattcacgccgataactctgtctctgtacaggatgacgggcgcggcattccg
accggtattcacccggaagagggcgtatcggcggcggaagtgatcatgaccgttctgcac
gcaggcggtaaatttgacgataactcctataaagtgtccggcggtctgcacggcgttggt
gtttcggtagtaaacgccctgtcgcaaaaactggagctggttatccagcgcgagggtaaa
attcaccgtcagatctacgaacacggtgtaccgcaggccccgctggcggttaccggcgag
actgaaaaaaccggcactatggtgcgtttctggccaagccttgaaaccttcaccaatgtg
accgagttcgaatatgacattctggcgaaacgtctgcgtgagttgtcgttcctcaactcc
ggcgtttccattcgtctgcgcgacaagcgcgatggcaaagaagaccacttccactatgaa
ggcggcatcaaggcattcgttgaatatctgaacaagaacaaaacgccgatccacccgaat
atcttctacttctccaccgaaaaagacggtattggcgtcgaagtggcgttgcagtggaac
gatggcttccaggaaaacatctactgctttaccaacaacattccgcagcgtgacggcggt
actcacctggcaggcttccgtgcggcgatgacccgcaccctgaacgcctacatggacaaa
gaaggctacagcaaaaaagccaaagtcagcgccaccggtgacgatgcgcgtgaaggcctg
attgcggtcgtttccgtgaaagtgccggacccgaaattctcctcacagaccaaagacaaa
ctggtttcttctgaggtgaaatcggcggttgaacagcagatgaacgaactgctggcggaa
tacctgctggaaaacccaaccgacgcgaaaatcgtggtcggcaaaattatcgatgctgcc
cgtgcccgtgaagctgcgcgtcgcgcgcgtgaaatgacccgccgtaaaggtgcgctggat
ttagctggcctgccgggcaaactggcagactgccaggaacgcgatccggcgctttccgaa
ctgtaccttgtggaaggggactccgcgggcggctctgcgaagcaggggcgtaaccgcaag
aaccaggcgattctgccgctgaagggtaaaatcctcaacgtcgagaaagcgcgcttcgat
aagatgctctcttctcaggaagtggcgacgcttatcaccgcgcttggttgtggtatcggt
cgtgacgagtacaacccggacaaactgcgttatcacagcatcatcatcatgaccgatgcg
gacgtcgacggctcgcacattcgtacgctgctgttgaccttcttctatcgtcagatgccg
gaaatcgttgaacgtggtcacgtctacatcgctcagccgccgctgtacaaagtgaagaaa
ggtaagcaggaacagtacattaaagacgacgaagcgatggatcagtaccagatctctatc
gcgctggatggcgcaacgctgcacaccaacgccagtgcaccggcgctggctggcgaagcg
ttagagaaactggtgtctgagtacaacgcgacgcagaaaatgatcaaccgcatggagcgt
cgttatccgaaagcaatgctgaaagagcttatctatcagccgacgctgacggaagccgat
ctctctgatgagcagaccgttacccgctgggtgaacgcgctggtcagcgaactgaacgac
aaagaacagcacggcagccagtggaagtttgatgtccataccaatgccgaacaaaacctg
ttcgagccgattgttcgcgtgcgtacccacggtgtggatactgactatccgctggatcac
gaatttatcactggcggcgaatatcgtcgtatctgcacgctgggtgagaaactgcgtggc
ttgctggaagaagatgcatttatcgaacgtggcgaacgtcgtcagccggtagccagcttc
gagcaggcgctggactggctggtgaaagagtcccgtcgcggcctctccatccagcgttat
aaaggtctgggcgagatgaacccggaacagctgtgggaaaccaccatggacccggaaagc
cgtcgtatgctgcgcgttaccgttaaagatgcgattgctgccgaccagttgttcactacg
cttatgggcgacgccgttgaaccgcgccgtgcgtttatcgaagagaacgccctgaaagcg
gcgaatatcgatatttaa
DBGET
integrated database retrieval system
