Williamsoniiplasma luminosum: ELUMI_v1c01180
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Entry
ELUMI_v1c01180 CDS
T05209
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
elj
Williamsoniiplasma luminosum
Pathway
elj03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
elj00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
ELUMI_v1c01180 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
elj03021
]
ELUMI_v1c01180 (rpoC)
03400 DNA repair and recombination proteins [BR:
elj03400
]
ELUMI_v1c01180 (rpoC)
Enzymes [BR:
elj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
ELUMI_v1c01180 (rpoC)
Transcription machinery [BR:
elj03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
ELUMI_v1c01180 (rpoC)
DNA repair and recombination proteins [BR:
elj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
ELUMI_v1c01180 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Peptidase_M23
Motif
Other DBs
NCBI-ProteinID:
ATZ16846
UniProt:
A0A2K8NTF6
LinkDB
All DBs
Position
complement(151953..155705)
Genome browser
AA seq
1250 aa
AA seq
DB search
MDNKNKKSIKIELASPETIRSWSRGEVTKPETINYKTLKSERDGLFDEKIFGPTKNYECF
CGKYKKANPMNKGKVCERCGVELTESIVRRERMGHIELEEPVTHIWMLKVAPSRIAAVLD
LKSKELEEVVYFVSHVVLETGDLKQLKVGEVLDLGSSKAPKTREKLANLIKTVIASLDDE
TSRDYRKATRLLEELDNTSVPFSIDEATALIAKHTGAKFGIGAEAIEYLLKRIDIPNTII
QLKNELREKNGTAEQTKIMRRLEVLHSLNKSGAKAEWMILRVLPVIPPDIRPIIQLDGGR
FTTSEINDLYRRIIIRNERLKKIKEMGAPSIIVNNEKRMLQEAVDALLDNERKPRPVTGK
DKRPLKSLTSILKGKQGRFRQNLLGKRVDYSGRSVIVVGPNLKMYQAGIPRDMAIILFKP
FVVQWLQEHEFAENVKVAERMIQQNDPKIWEALEQVIKDRPVLLNRAPTLHRLGIQAFEP
KIVKGKAIRLHPLVTTAFNADFDGDQMAVHVPITKEAIGEARALMLGSNAILGPKDGKAI
VTPTQDMILGNYYVTQEEKGLLGEGIIFATVDDIKTAYATESIALNALIGIAVSALPGLK
FPASAHDKYLFTTVGKVLFNEVFTKDFAWINSPVIFGAETEIEKYLLPFSTDINEFIKTY
EVNQPIKKKELSLIIEKYFGIYGARKTAEMLDNMKDLGYLFSTKSGVTISAGDVVAYTAK
YDEFEAADEKVAQITDFYHKGMLTATEKKIRVIEVWSSLKDQIQKELEVILRQDTKNPVF
VMADSGARGNVSNFTQLVGMRGLMNDTKGDIKEIPIKSSFREGLSVSEYFISTHGARKGM
ADIALKTADSGYLTRRLVDVSQEIVVSREDCDSITGFKVSAIVDTKHSNTIVPIKDRIIG
RYTFKDIETDNGDIIIPKNTLVTKQLAELVIKHDVKSVYIRSVLTCDNTHGVCQMCYGVN
LATGDVVKMGEPVGVIAAQSIGEPGTQLTMRNFHTGGVAGDADITQGLPRIKELFDVTTP
KGSVAIISQMDGVVKEVLDDDGVYTISVENDQEIKKYHTQFQAVVRVAKGDQVYKGQKLT
EGAINLRELLEIAAVVDVQNYILKEVQKVYRLQGIEISDKYIEIIIKEMLNKVRVLDGMD
SDLLPGEIITSQAYKASVAKSLMEGKRPAIVKTTIFGIKKAPLESESWLSSASFQDTARV
LSKAIISGKVDKLQGLKENIMLGNLIPAGTGLTGAEEVMRIGEEYHKNEY
NT seq
3753 nt
NT seq
+upstream
nt +downstream
nt
atggataacaaaaataaaaaatcaataaaaatcgaattagcttctccagagactattcgc
tcatgatctcgtggtgaagtaacaaaacccgagacaatcaactacaaaacattaaagtca
gaaagagacggactatttgatgaaaaaatctttggtccaactaaaaactatgaatgtttt
tgtggaaaatataaaaaagccaacccaatgaacaaaggaaaagtttgtgaacgttgtggt
gtagaattaactgaatcaattgttcgtcgtgaaagaatgggacatattgaattagaagaa
ccagtcactcatatttgaatgctaaaagttgcgccttcaagaattgctgctgttttagat
ttaaaatctaaagagttagaagaagtagtttactttgttagtcacgttgttttagaaaca
ggtgatttaaaacaattaaaagttggtgaagtcttagatcttggatcttcaaaagcgcca
aaaactcgtgaaaaactagctaacttaattaaaactgtcatcgcttcacttgatgatgaa
acatctcgtgattaccgaaaagcaacacgtttattagaagaattagataacacaagtgtg
ccattttcaatcgatgaagcaactgctttaattgcaaaacacacaggtgctaaatttgga
atcggggcagaagcgatcgaatatctattaaaaagaatcgatattccaaacacaattatt
caattgaaaaatgaattacgtgaaaaaaacggaactgctgaacaaactaaaatcatgcgt
cgtttagaagttttacactccctaaataaatcaggagcgaaagctgaatgaatgattcta
cgtgttttaccagttattccaccagacatccgtccaattatccaattggacggaggacgt
ttcacaactagtgaaattaatgacctttaccgaagaatcattattcgtaacgaacgttta
aagaaaattaaagaaatgggcgcaccatcaattattgttaacaacgaaaaacgtatgtta
caagaagctgttgatgccttattagataacgaacgtaagcctcgtccagtgactggaaaa
gacaaacgtccattaaaatcattaacatcaattctaaaaggaaaacaaggacgtttccgt
caaaaccttttaggaaaacgtgtcgattattcaggtcgttcagtaattgttgttggtcca
aacttaaaaatgtaccaagccggaattcctcgtgatatggcaattattttattcaaacca
tttgttgttcaatgattacaagaacacgaatttgctgaaaacgttaaagttgctgaaaga
atgattcaacaaaatgatccaaaaatttgagaagctttagagcaagtaattaaagatcgt
ccggtcctattaaaccgtgccccaactcttcaccgtttaggaattcaagcctttgaacct
aaaatcgtcaagggaaaagcgatccgcttacacccattagtaaccactgcatttaacgcc
gacttcgatggggaccaaatggctgtccacgttccaattactaaagaagcaattggagaa
gcacgtgctttaatgttaggttcaaatgcaattttgggaccaaaagatggtaaagcaatt
gtaactccaactcaagatatgattcttggaaattactatgtaactcaagaagaaaaaggt
cttttaggagaaggaattatttttgccacagttgatgacatcaaaactgcttatgcgaca
gaaagtattgctttaaatgctttaattggaattgctgttagtgcattaccggggttaaaa
ttcccagcaagtgctcatgataaatacttatttacaactgttggtaaagttttatttaac
gaagtctttaccaaagacttcgcctgaattaactcaccagttattttcggagctgaaact
gaaattgaaaaatacttactaccattttcaactgatattaatgaattcattaagacttat
gaagttaaccaaccaattaagaaaaaagaactttcattaattattgaaaaatactttgga
atttatggagcacgtaaaactgctgaaatgttagataacatgaaagacttgggatactta
ttctcaactaaatcaggagttactatttcagccggtgacgttgttgcttatactgctaaa
tatgatgaatttgaagcagctgatgaaaaagtggcacaaattactgatttctaccacaag
ggaatgctaactgccactgagaaaaaaattcgtgtgattgaagtttgatcaagtttaaaa
gatcaaattcaaaaagaattagaagtaattttacgtcaagatactaaaaaccctgtcttt
gtgatggcggattctggtgctcgtggaaacgtttctaactttactcaacttgtagggatg
cgtggattgatgaacgatactaaaggggatattaaagaaatcccaattaaatcatcattc
cgtgaaggactatcggtgtctgaatactttatttcaacgcatggtgctcgtaaagggatg
gccgatattgccttgaaaactgccgattcaggatacctaactcgtcgtttagttgacgtt
tcacaagaaattgttgtttcacgtgaagactgtgattcaatcacaggcttcaaagtttca
gcgattgttgatacaaaacatagcaatactatcgttccaattaaggaccgtattattggt
cgttacacattcaaagatattgaaactgacaatggggatattatcattccaaaaaacact
ttagtaactaaacaattagctgaattagtgattaaacatgatgttaaatcagtttatatt
cgttcagtcttaacttgtgataacacacatggtgtttgccaaatgtgttacggagtgaac
ttagcaactggagatgttgtaaaaatgggagaaccagttggagttattgccgcccaatca
attggagaacccggaactcaacttacaatgcgtaacttccataccggaggggttgctggg
gatgctgatattacccaaggacttccacgtattaaagaattatttgacgttactactcca
aaagggtcagtggccatcatttcgcaaatggatggtgtggttaaagaagttcttgatgat
gatggagtttacacaatatctgttgaaaatgaccaagaaatcaaaaaataccacacacaa
ttccaagcagttgtgcgtgtggctaaaggtgatcaagtttacaaaggtcaaaaactgaca
gaaggagcaattaacttacgtgaattgctagaaattgcagctgttgttgatgttcaaaac
tacatcctaaaagaagtgcaaaaagtttaccgtttacaaggaattgaaatttctgataaa
tatatcgaaattatcattaaagaaatgttaaacaaagtgcgtgttcttgatggaatggac
tctgatctattacctggagaaatcattactagccaagcttacaaagcaagtgttgctaaa
tcattaatggaaggtaaacgcccagcgattgttaaaacaacaatcttcggaattaaaaaa
gctccattagaatctgaatcatgattatcatctgcttcattccaagatacagcccgtgtg
ttgtcaaaagccattattagtggaaaagttgacaaactacaaggattaaaagaaaacatt
atgttaggaaacttaatccctgccggaactggattaactggtgctgaagaagtaatgaga
attggtgaagaataccataaaaatgaatattaa
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