Enhydra lutris kenyoni (northern sea otter): 111158115
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Entry
111158115 CDS
T05871
Name
(RefSeq) ATP-dependent RNA helicase DHX8 isoform X1
KO
K12818
ATP-dependent RNA helicase DHX8/PRP22 [EC:
3.6.4.13
]
Organism
elk
Enhydra lutris kenyoni (northern sea otter)
Pathway
elk03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
elk00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111158115
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
elk03041
]
111158115
Spliceosome [BR:
elk03041
]
Complex C
Other components
Step II factors
111158115
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
S1
Helicase_C
HA2_N
DEAD
AAA_22
AAA_19
nSTAND3
Flavi_DEAD
AAA_16
T2SSE
TsaE
PhoH
Sigma54_activ_2
ABC_tran
Motif
Other DBs
NCBI-GeneID:
111158115
NCBI-ProteinID:
XP_022375680
UniProt:
A0A2Y9L2H8
LinkDB
All DBs
Position
Unknown
AA seq
1222 aa
AA seq
DB search
MAVAVALAGAVTTTELGPAEELAKLEYLSLVSKVCTELDNHLGINDKDLAEFVISLAEKN
TTFDTFKASLVKNGAEFTDSLISNLLRLIQTMRPPAKPSTSKDPVVKPKTGKEKLKELFP
VLCQPDNPSVRTMLDEDDVKVAVDVLKELEALMPSAAGPDKQRDAEHRDKTKKKKRSRSR
DRDRERDRDRERDRDRDRDHKRRHRSRSRSRSRTRERNKGKSRYRSRSRSQSPPKDRKDR
DKYGERNLDRWRDKHVDRPPPEEPAIGDIYNGKVTSIMQFGCFVQLEGLRKRWEGLVHIS
ELRREGRVANVADVVSKGQRVKVKVLSFTGTKTSLSMKDVDQETGEDLNPNRRRNLVGET
NEETSMRNPDRPTHLSLVSAPEVEDDSLERKRLTRISDPEKWEIKQMIAANVLSKEEFPD
FDEETGILPKVDDEEDEDLEIELVEEEPPFLRGHTKQSMDMSPIKIVKNPDGSLSQAAMM
QSALAKERRELKQAQREAEMDSIPMGLNKHWVDPLPDAEGRQIAANMRGIGMMPNDIPEW
KKHAFGGNKASYGKKTQMSIIEQRESLPIYKLKEQLVQAVHDNQILIVIGETGSGKTTQI
TQYLAEAGYTSRGKIGCTQPRRVAAMSVAKRVSEEFGCCLGQEVGYTIRFEDCTSPETVI
KYMTDGMLLRECLIDPDLTQYAIIMLDEAHERTIHTDVLFGLLKKTVQKRQDMKLIVTSA
TLDAVKFSQYFYEAPIFTIPGRTYPVEILYTKEPETDYLDASLITVMQIHLTEPPGDILV
FLTGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFDPAPPGSRKVVIA
TNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAKQRAGRAGRTGPGK
CYRLYTERAYRDEMLTTNVPEIQRTNLASTVLSLKAMGINDLLSFDFMDAPPMETLITAM
EQLYTLGALDDEGLLTRLGRRMAEFPLEPMLCKMLIMSVHLGCSEEMLTIVSMLSVQNVF
YRPKDKQALADQKKAKFHQTEGDHLTLLAVYNSWKNNKFSNPWCYENFIQARSLRRAQDI
RKQMLGIMDRHKLDVVSCGKSTVRVQKAICSGFFRNAAKKDPQEGYRTLIDQQVVYIHPS
SALFNRQPEWVVYHELVLTTKEYMREVTTIDPRWLVEFAPAFFKVSDPTKLSKQKKQQRL
EPLYNRYEEPNAWRISRAFRRR
NT seq
3669 nt
NT seq
+upstream
nt +downstream
nt
atggcggtggctgtggccctggcgggagcagtaaccaccacagaactaggccccgcggaa
gaactcgccaaactcgagtatctgtctttagtgtcgaaagtttgcaccgagctggacaat
cacctggggattaacgacaaggatctggctgaatttgtgatcagtcttgctgagaagaat
accacctttgatacttttaaggcttccctggtcaaaaatggcgctgaattcacggattct
cttattagtaacttgctgcgtctcatacaaaccatgcggcctccagcaaagccttctact
agcaaagatccagttgttaaacccaaaaccggaaaagaaaagctgaaggaactcttccca
gtcctttgccaaccagacaacccttctgtccggaccatgctggatgaggatgatgtgaaa
gtcgctgtggatgtgctgaaggaactagaggccttaatgcccagcgctgccggcccggac
aagcagcgagatgctgagcaccgggacaagacgaagaagaagaagcggagccggagccgc
gaccgggaccgagaacgggaccgagatcgggagcgagaccgagaccgtgatagagaccac
aagaggagacaccggtcccgctcccggtcacgttccaggacccgggaaaggaataaaggg
aagtctaggtatcggtccaggagcagaagtcagagtccccccaaagataggaaggaccgg
gacaagtatggggagaggaatctggacagatggcgggataagcatgtggaccgccctccc
ccagaagagcctgccatcggagacatttacaatggcaaagttaccagcatcatgcagttt
ggatgctttgtgcagctggagggattaaggaagcggtgggaaggcctggtgcacatctct
gagctccggcgagaaggccgtgtggccaatgtggcggatgtggtgagcaaaggccagagg
gtgaaagtcaaagtactgtccttcactgggaccaagaccagtctgagcatgaaggatgtg
gatcaagagactggagaagatctaaaccccaaccgacgacggaatcttgttggggagacc
aatgaggagacctcaatgaggaatccagacagaccgactcacctctccctcgtcagtgcc
cccgaagtagaggatgattcactggagcgcaaacgccttacccgcatctctgacccggag
aagtgggagatcaaacagatgattgctgccaacgtgctttccaaagaagagtttccggac
ttcgatgaagagaccggcattcttcctaaagtggatgatgaagaagatgaagatcttgag
atcgaactggttgaggaagagcctccattcttgagagggcacaccaagcaaagcatggac
atgagccctattaaaatcgttaagaacccggatggttccctctcccaagcagcaatgatg
caaagtgccttagccaaagaaagacgggaactcaagcaggcccagagggaagcggagatg
gattctattcccatggggctcaacaaacactgggttgatcctctgcctgatgcggaaggc
aggcagattgccgccaatatgaggggtattgggatgatgcccaatgacattcccgagtgg
aagaagcatgcctttgggggcaacaaagcttcttatgggaagaaaacccagatgtcaatc
attgagcagagagagagcttgcccatctacaaactgaaggagcagctggtccaggctgtc
catgacaatcaaatcctgatagttattggagagacaggatctgggaagacaacacagatc
acccagtacctggcggaggcaggctacacgtcccggggcaagattggatgtacccaaccc
agaagagtagcagccatgtcagtggccaaaagagtgtcagaggagtttggttgttgcttg
ggccaagaggtgggctacaccattcgatttgaggactgcaccagcccagagacagtgatc
aagtacatgacagacgggatgttgctccgagagtgcctgattgaccctgacctcacacag
tacgcgatcatcatgttggacgaggcgcacgagagaaccattcacacggacgtgctcttc
gggttgttgaagaagacggttcagaaacggcaggacatgaagctgattgtcacctcagcc
acactggatgcagtgaagttttctcagtacttctacgaagcgcccatcttcaccatccct
ggtcgaacatacccggtggagatactgtacacgaaggaaccggagacagattatctggac
gccagcttgatcactgtcatgcagatccacttaacagaaccaccaggtgatatcctggtc
ttcctgactggtcaggaggagatcgacaccgcgtgtgagatcctctatgaaagaatgaag
tccctgggaccggatgttccagagctgatcatcctgccagtgtactctgctcttcccagt
gagatgcagacccgaatctttgacccggctccgcctggcagcagaaaggtcgtgattgcc
accaacattgcagagacctcactgactattgatggcatctactacgtggtggaccctgga
tttgtgaagcagaaagtttacaattccaagaccggcatcgaccagctcgtggtcactccg
atttctcaggctcaggcaaagcagcgagctggcagagctgggagaacaggcccagggaag
tgttacaggctgtacaccgaacgtgcctacagagatgaaatgctgaccaccaacgtgccg
gaaattcagaggaccaacctagcaagcacagtgctctcactcaaggccatgggcatcaat
gacctgctgtcctttgacttcatggatgcgcctccaatggaaaccttgatcacagccatg
gagcagctgtatacgctgggggccttggacgacgagggcctgctcactcgcctgggccgc
aggatggcagaattccccctggagccaatgctgtgcaaaatgctgatcatgtccgttcat
ctgggctgcagtgaggagatgctgaccatcgtgtccatgctgtcggtgcagaacgtcttc
tacaggcccaaggataaacaagccctcgccgaccagaagaaagccaagttccaccagacc
gaaggggaccaccttaccctgctggctgtgtacaactcctggaagaacaacaagttctcc
aacccgtggtgctatgagaacttcatccaggctcgctctctgcgccgggcccaggatatt
cgcaagcagatgttaggcataatggacagacacaagctggatgtggtctcctgtggcaag
tccacggtgcgagtgcaaaaggccatctgcagtggattcttccggaacgctgccaagaaa
gacccacaggagggctaccggacactgatcgaccagcaggtggtctacatccacccttcc
agcgctctcttcaacagacagcccgagtgggtggtgtaccacgagctggtgctgaccaca
aaggagtacatgcgtgaggtcaccactatcgaccccaggtggcttgtggagtttgctcca
gccttcttcaaggtctccgacccaaccaagctgagcaagcagaagaagcagcagcgtctt
gagcccttgtacaaccgctatgaggagcccaacgcatggagaatatcccgggccttccgc
cggcgctga
DBGET
integrated database retrieval system
