Escherichia coli W: WFL_07885
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Entry
WFL_07885 CDS
T02101
Symbol
ddpF
Name
(GenBank) D-ala-D-ala transporter subunit DdpF
KO
K02032
peptide/nickel transport system ATP-binding protein
Organism
ell
Escherichia coli W
Pathway
ell02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ell00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
WFL_07885 (ddpF)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ell02000
]
WFL_07885 (ddpF)
Transporters [BR:
ell02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
WFL_07885 (ddpF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
oligo_HPY
AAA_22
AAA_21
AAA_16
SMC_N
AAA_25
AAA
ABC_ATPase
Sigma54_activat
AAA_29
NACHT
AAA_5
RsgA_GTPase
RNA_helicase
AAA_13
ATP-synt_ab
nSTAND1
AAA_18
Rad17
Propep_M14
PRK
nSTAND3
NB-ARC
AAA_33
Mg_chelatase
AAA_7
ATPase
Motif
Other DBs
NCBI-ProteinID:
AFH11239
LinkDB
All DBs
Position
complement(1662606..1663532)
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AA seq
308 aa
AA seq
DB search
MSDTLLTLRDVHINFPARKNWLGKTTEHVHAINGIDLQIRRGETLGIVGESGCGKSTLAQ
LLMGMLQPSHGQYIRSGSQRIMQMVFQDPLSSLNPRLPVWRIITEPLWIAKRSSEQQRRA
LAEELAVQVGIRAEYLDRLPHAFSGGQRQRIAIARALSSQPDVIVLDEPTSALDISVQAQ
ILNLLVTLQENHGLTYVLISHNVSVIRHMSDRVAVMYLGQIVELGDAQQVLTAPAHPYTR
LLLDSLPAIDKPLEEEWALRKTDLPGNRTLPQGCFFYERCPLATHGCEVRQSLTIREDGR
EIRCWRAL
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
gtgtctgacacgttattaacgttacgcgacgtccatatcaatttcccggcccgtaaaaac
tggcttggtaaaactacggaacatgttcatgccattaatggtattgatttacagatccgc
cgtggtgaaaccttagggatcgtcggcgagtcaggctgcggcaaaagcaccctcgcacag
cttttaatgggtatgctgcaaccgagccacgggcagtacatccgttcaggctcacaacgc
attatgcagatggtgtttcaggacccgctatcttcgctcaatccgcgcttaccggtgtgg
cgcatcatcacagaaccgctctggatagctaagcgtagtagtgaacaacagcggcgagcg
ttggcagaggagctggctgtgcaggtgggtattcgtgcggagtatctcgaccgcctgcct
catgcgttctccggcgggcagcggcaacgcatcgccattgccagagcactctcttcgcag
cctgacgtgattgtgcttgatgagccaacctctgcgctggatatctccgtgcaggcgcag
atcctcaatttactggtaacgctacaggaaaatcacgggctgacttatgtgctgatttca
cacaatgtctcggtgatacgtcatatgagcgatcgggtggcggtgatgtatctcgggcag
attgtggaattaggagacgcgcagcaggtgttgacggcacctgcacatccatacacccga
ttattgctggattccctccccgccattgataaaccgctggaggaagaatgggcattacgt
aaaacggatctgccgggaaaccgcacgttgccgcaaggctgttttttctacgaacgttgc
cctctggcaacccacggatgtgaagtccggcaatcattaacaataagggaggacggacgt
gagatccggtgctggcgggcgctgtag
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