Escherichia coli P12b: P12B_c1225
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Entry
P12B_c1225 CDS
T02030
Symbol
ruvB
Name
(GenBank) Holliday junction ATP-dependent DNA helicase ruvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
elp
Escherichia coli P12b
Pathway
elp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
elp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
P12B_c1225 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
elp03400
]
P12B_c1225 (ruvB)
Enzymes [BR:
elp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
P12B_c1225 (ruvB)
DNA repair and recombination proteins [BR:
elp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
P12B_c1225 (ruvB)
RecFOR pathway proteins
P12B_c1225 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
AAA_22
Mg_chelatase
AAA_3
Rad17
AAA_14
nSTAND3
AAA_16
TIP49
AAA_18
AAA_2
RNA_helicase
AAA_17
NTPase_1
NB-ARC
Bac_DnaA
AAA_24
AAA_28
TsaE
bpMoxR
ABC_tran
Sigma54_activ_2
Motif
Other DBs
NCBI-ProteinID:
AFG40090
LinkDB
All DBs
Position
1326543..1327553
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AA seq
336 aa
AA seq
DB search
MIEADRLISAGTTLPEDVADRAIRPKLLEEYVGQPQVRSQMEIFIKAAKLRGDALDHLLI
FGPPGLGKTTLANIVANEMGVNLRTTSGPVLEKAGDLAAMLTNLEPHDVLFIDEIHRLSP
VVEEVLYPAMEDYQLDIMIGEGPAARSIKIDLPPFTLIGATTRAGSLTSPLRDRFGIVQR
LEFYQVPDLQYIVSRSARFMGLEMSDDGALEVARRARGTPRIANRLLRRVRDFAEVKHDG
TISADIAAQALDMLNVDAEGFDYMDRKLLLAVIDKFFGGPVGLDNLAAAIGEERETIEDV
LEPYLIQQGFLQRTPRGRMATTRAWNHFGITPPEMP
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atgattgaagcagaccgtctgatttctgccggtaccactttgccggaagatgtagcagat
cgcgccattcgccctaaattactggaagagtatgttggtcagccgcaggttcgttcacag
atggagattttcatcaaagcagcgaaactgcgcggcgatgccctcgatcatttgttgatt
tttggtcctccggggttgggtaaaactacgcttgccaacattgtcgccaatgaaatgggc
gttaatttacgcacgacttctggtccggtgctggaaaaggcgggcgatctggcagcgatg
ctcactaaccttgaaccgcatgacgtgctgtttattgatgagatccaccgtttatcgcca
gttgttgaagaagtgctgtacccggcaatggaagactaccaactggatatcatgattggt
gaaggtccggcggcacgctccattaaaattgatttgccgccgtttaccctgattggcgca
accacgcgcgcaggttcgctgacatcaccgttgcgcgaccgttttggtattgtgcaacgt
ctggagttttatcaggtgccggatctgcaatatatcgttagtcgcagtgcacgctttatg
gggcttgagatgagtgatgacggcgcgctggaagttgctcgtcgcgctcgcggtacgcca
cgtattgccaaccgtctgctgcgtcgagtgcgtgatttcgccgaagtgaagcacgatggc
accatctcggcagatatcgctgctcaggcgctggacatgttgaatgtcgatgctgaaggt
ttcgattatatggaccgcaaattgttgctggcggtaatcgataagttctttggtgggccg
gtaggtctggataacctggcggcggctattggcgaagaacgtgaaaccattgaggatgtg
ctggaaccttatttgattcagcaaggctttttgcagcgtacaccgcgtgggcgtatggcg
acgacgcgggcgtggaatcactttggcataacgccgccagaaatgccgtaa
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