KEGG   Escherichia coli P12b: P12B_c3120
Entry
P12B_c3120        CDS       T02030                                 
Symbol
ygiS
Name
(GenBank) Putative binding protein ygiS
  KO
K02035  peptide/nickel transport system substrate-binding protein
Organism
elp  Escherichia coli P12b
Pathway
elp02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:elp00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    P12B_c3120 (ygiS)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:elp02000]
    P12B_c3120 (ygiS)
Transporters [BR:elp02000]
 ABC transporters, prokaryotic type
  Peptide and nickel transporters
   Peptides/nickel transporter
    P12B_c3120 (ygiS)
SSDB
Motif
Pfam: SBP_bac_5
Other DBs
NCBI-ProteinID: AFG41951
LinkDB
Position
complement(3414145..3415752)
AA seq 535 aa
MYTRNLLWLVSLVSAAPLYAADVPANTPLAPQQVFRYNNHSDPGTLDPQKVEENTAAQIV
LDLFEGLVWMDGEGQVQPAQAERWEILDGGKRYIFHLRSGLQWSDGQPLTAEDFVLGWQR
AVDPKTASPFAGYLAQAHINNAAAIVAGKADVTSLGVKATDDRTLEVTLEQPVPWFTTML
AWPTLFPVPHHVIAKHGDSWSKPENMVYNGAFVLDQWVVNEKITARKNPKYRDAQHTVLQ
QVEYLALDNSVTGYNRYRAGEVDLTWVPAQQIPAIEKSLPGELRIIPRLNSEYYNFNLEK
PPFNDVRVRRALYLTVDRQLIAQKVLGLRTPATTLTPPEVKGFSATTFDELQKPMSERVA
MAKALLKQAGYDASHPLRFELFYNKYDLHEKTAIALSSEWKKWLGAQVTLRTMEWKTYLD
ARRAGDFMLSRQSWDATYNDASSFLNTLKSDSEENVGHWKNAQYDALLNQATQITDATKR
NALYQQAEVIINQQAPLIPIYYQPLIKLLKPYVGGFPLHNPQDYVYSKELYIKAH
NT seq 1608 nt   +upstreamnt  +downstreamnt
atgtatacgcgaaatttattatggctggtcagcctggtaagtgcggctcctctctacgct
gctgacgttcccgccaacacaccgctcgccccgcaacaagtctttcgttacaacaatcat
agcgacccaggtacgctcgacccgcaaaaggtggaggagaatactgccgcgcagattgtg
ctggatctgtttgaaggtctggtatggatggacggtgaaggccaggtgcagcccgctcag
gctgaacgctgggagatactggacggcggcaagcgctatattttccatctgcgtagcggt
ttgcagtggtccgacggtcagcctctgacggcagaggattttgtcctcggctggcagcgc
gcggttgacccgaaaacggcaagcccttttgctggctatctggcacaggcgcacattaac
aatgccgcagctattgttgcgggtaaagcagatgttacatcgctgggtgtcaaagcgacg
gatgatcgtactcttgaagttacgcttgagcagccggttccttggttcacgacgatgctc
gcctggccgacgctgttcccggttcctcatcatgtcatcgctaaacatggcgatagctgg
agtaagccagagaacatggtttacaacggtgcctttgtgcttgatcagtgggtagttaac
gaaaagattactgcacgcaaaaatccaaagtaccgcgatgcgcaacatacagtattgcaa
caggttgagtatctggcgctagataattcggtcaccggctataaccgctatcgcgcggga
gaggtcgatctcacctgggttccggcgcagcaaattcccgccattgaaaaatcactgcct
ggcgagctacgaattattccgcgtctgaacagcgaatattacaacttcaaccttgagaaa
ccgccatttaacgatgtgcgagtgcgtcgggcgctatatcttacggttgatcgacagctt
attgcgcaaaaggtactggggttgagaacgcccgcaaccacgctgacgccgccagaggta
aaaggctttagcgcgacgacgttcgatgaactgcaaaagccaatgagtgagcgcgtcgcg
atggcaaaagccttgctgaaacaggcgggatacgacgcctctcatccgctacgctttgag
ctgttctacaacaagtacgatctgcatgaaaagaccgcgatagcgttgtcttccgaatgg
aaaaaatggctgggtgcacaggtgacgctgcgcacaatggagtggaaaacctatcttgat
gcccgacgagccggtgatttcatgctgtctcggcagtcgtgggatgcgacgtacaatgat
gcttccagcttcctgaacacgctcaaaagcgatagtgaagaaaacgtcggtcactggaaa
aatgcgcagtatgacgccttactaaaccaggccacgcagatcactgatgcgacaaagcgt
aatgcgttgtatcagcaggcagaagtgatcatcaaccaacaggcaccgctgattcctatc
tactatcagccgttaatcaaactgcttaaaccctacgttggcggttttccgctgcataat
ccccaggattatgtctacagcaaagagttgtatatcaaggcacattga

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