KEGG   Esox lucius (northern pike): 105007451Help
Entry
105007451         CDS       T04894                                 

Gene name
lig4
Definition
(RefSeq) DNA ligase 4
  KO
K10777  DNA ligase 4 [EC:6.5.1.1]
Organism
els  Esox lucius (northern pike)
Pathway
els03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:els00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    105007451 (lig4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:els03400]
    105007451 (lig4)
Enzymes [BR:els01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     105007451 (lig4)
DNA repair and recombination proteins [BR:els03400]
 Eukaryotic Type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    DNA Ligase 4 complex
     105007451 (lig4)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_IV BRCT_2 DNA_ligase_A_C BRCT RNA_ligase APG17
Motif
Other DBs
NCBI-GeneID: 105007451
NCBI-ProteinID: XP_010864693
LinkDB All DBs
Position
Unknown
AA seq 914 aa AA seqDB search
MEGASQSKSASPQSSVAAQVPFLHLCTTLEKIQKTKLRPDKSKFLRDFIDSWRKFHAALH
KDSPTATDSFYPAMRLIVPPFERERMAYGIKESMLAKLYIDVLGLPKNGPEANKLLNYRA
PTTSQGEAGDFALMAYFVLKKRCTSQGNLTIKDVNDFLDSVAINNASKQKDLVKKSLLHL
ITQSTALEQKWLIRMILKDMKLGISKETVLQVFHPDAAELYNVTTDLNKVCRQLHDPFVS
LSEVSIGLFSAFKPMLAAVGNMRQVEKQMGNSTFFIETKLDGERIQLHKDGDVYKYFTRN
SFEYTQQFGASPLEGSLTPFIHNIFKPHIVNCILDGEMMAYNPTTDTFMQKGSKFDIKKL
VDDSELQTCFCVFDVLLINDQKFGNDTLKKRHEHLQTVFTPVKGRIHVVPKTEAKTMQEV
VNALNEAIDNREEGIMVKDPLSIYKPDKRGEGWIKIKPEYVDGLMDELDLLIVGGYWGKG
RRGGMMSHFLVAVAEAPKPGEKPSVFHTFCRIGSGYTMKELYDLGLKLAKYWKVYRKNDP
PASILCGTERPEVYIDPCNSVIIQVKAAEIVSSDMYKTNCTLRFPRIEKIREDKEWHQCM
SLADLEQFRNKASGKLFSRHLRLNDDNEPEKKKRKTPAAAKPKKAAGVIDHFKSQDLSGV
TKETDMFEDVEFCVMNGSEDHPKTELEKAVARCGGIVVQNPGQETYCVIAAIENMRVKNL
ISSNQHDVVWAAWLLECLDRKQVVPWQPSHMIHMSPSTKEHFAKEYDCYGDSYFVDTDVQ
QLKEVFGRISSVDTIMSHCIAKVEERYGWHDLPTSMFRHLRFYLDMYADIGEVNSLIPNT
CLDMRALELRFHGGKVVQKLEEGVSHVIVVEETRVLDLRTLRRLFTKKFKIVKESWVTDS
IKAGYLQNDSDYLV
NT seq 2745 nt NT seq  +upstreamnt  +downstreamnt
atggagggagcttcacaaagtaaatctgcttctccccagagctctgtcgcagctcaagtt
ccatttcttcacctgtgcaccacattagaaaagatccagaagaccaaactccgcccagac
aaatcaaagtttcttcgggacttcatagactcctggaggaagttccatgccgcccttcac
aaagacagtcctactgccacagactcgttctaccccgccatgcgtctcatagtcccccca
tttgaaagggagcgtatggcctatggcattaaagagagcatgttagccaagctgtacata
gacgtcttgggtctccccaagaatggaccggaggctaacaaactgttgaattaccgtgcc
ccaaccacgtctcagggagaggcgggagactttgctctcatggcttactttgtgttaaag
aaacgctgcacaagccaaggaaatctcaccatcaaagatgttaatgactttctggactct
gtggcaatcaacaatgctagtaagcagaaggacctggtgaagaagagcctgcttcatcta
atcacccagagcacagccctagagcagaaatggctcatccgcatgatcctgaaggacatg
aagctggggatcagcaaagagacagtgcttcaggtgttccacccagatgcagccgagctt
tataatgtcaccaccgatctaaataaagtgtgccgacagcttcatgacccctttgtgtct
ctcagcgaagtgtccattggccttttttctgccttcaaacccatgttggctgctgtggga
aatatgcgccaggtcgagaagcaaatgggcaacagcaccttcttcattgagaccaagctg
gatggagagcgcatccagttgcacaaggatggtgatgtctacaagtacttcacaaggaac
tcctttgagtacacccagcagttcggggcttcacctctagagggctctctgacgcctttt
attcacaatatctttaagccgcacatcgtcaactgcatcctggatggggaaatgatggct
tacaaccccaccactgacactttcatgcaaaagggaagcaagtttgatatcaagaagctg
gttgatgactctgagctgcaaacatgcttttgtgtttttgatgtgcttctgattaatgac
caaaagtttggtaatgacacattaaaaaagcgccatgaacaccttcaaactgtttttact
cctgtaaaaggaaggatacacgttgtgcctaaaacagaggccaaaaccatgcaagaggta
gtgaatgcccttaacgaagccatcgacaatagggaggagggaatcatggtgaaggatccg
ttgtcaatatacaaacctgataagcgtggtgaaggctggatcaagatcaagccggagtat
gttgatggcttgatggacgagctcgaccttttaattgttggaggctactgggggaaagga
aggcggggcggcatgatgtctcatttccttgttgctgttgctgaagctccaaagcccgga
gagaaaccctctgttttccacacattttgccgcattggctctggctacaccatgaaagag
ctgtacgacttaggcctgaagctggccaaatactggaaagtctatcggaaaaatgaccct
ccagcttctattctgtgtgggacggagagacctgaagtctacatcgacccatgcaactcg
gtcatcatccaagtaaaggcggctgaaatagtcagcagtgacatgtacaaaaccaattgc
acactgcgcttccccaggatagagaaaatccgtgaagacaaagaatggcaccagtgcatg
tccttagctgatctcgaacagttccgcaacaaggcatccgggaagttgttctcacgccac
cttcgcctcaatgatgacaacgagcccgaaaagaagaagcgtaagacgccagcagctgcc
aagcccaagaaggctgctggtgtcatcgatcacttcaagtcccaggacctgtctggtgtc
accaaagagactgatatgtttgaggatgtggagttctgcgtgatgaacgggagtgaggac
caccccaagacagaattggagaaggctgtggcccggtgtggtggtattgtagtccagaac
ccaggacaggagacctactgtgtgatcgctgccattgagaatatgcgcgttaagaacctg
atatcatccaaccagcatgacgttgtgtgggctgcctggctgctggagtgtctagacagg
aagcaggtggtgccctggcagccaagtcacatgatccacatgtcaccttccactaaggag
cactttgccaaggagtatgattgctacggagacagctactttgtggacacagatgtgcag
cagcttaaggaagtcttcggtcggattagcagtgtagacactataatgtcgcattgcatt
gccaaggtggaggagcgctacggctggcatgacctccccaccagcatgttcagacattta
aggttctacctggacatgtatgccgacattggagaagtgaatagccttatcccaaacaca
tgtctggacatgcgagctctggaacttcgtttccacggcgggaaagtagtgcagaagctg
gaggaaggggtctcgcatgtcatagtggtggaggaaacaagagtattggatttaagaacc
ctcagacgactttttaccaagaagtttaagattgttaaggaatcatgggtaacagattct
atcaaagcagggtatttgcagaatgacagtgactacttagtttga

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