Esox lucius (northern pike): 105013184
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Entry
105013184 CDS
T04894
Symbol
smarca4
Name
(RefSeq) transcription activator BRG1 isoform X1
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
els
Esox lucius (northern pike)
Pathway
els03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
els00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
105013184 (smarca4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
els03021
]
105013184 (smarca4)
03036 Chromosome and associated proteins [BR:
els03036
]
105013184 (smarca4)
Transcription machinery [BR:
els03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
105013184 (smarca4)
Chromosome and associated proteins [BR:
els03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
105013184 (smarca4)
Chromatin remodeling factors
BAF complex
105013184 (smarca4)
PBAF complex
105013184 (smarca4)
GBAF(ncBAF) complex
105013184 (smarca4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SnAC
Bromodomain
HSA
BRK
QLQ
ResIII
HDA2-3
DEAD
Motif
Other DBs
NCBI-GeneID:
105013184
NCBI-ProteinID:
XP_010872834
UniProt:
A0A3P8Y0M4
LinkDB
All DBs
Position
LG11:19123403..19140333
Genome browser
AA seq
1636 aa
AA seq
DB search
MSTPDPPMGGTPRPGPSPGPGPSPGAMMGPSPSPGSAHSMMGPSPGPPASGHPHPQQGPS
GYPQENMHQMHKPMEGMHEKGMPDDPRYGQMKGMGLRPGGHSGMGPPPSPMDQHSQGYPS
PLGGSEHAPSPVPANGPPPGPMMPSGPGGVPMEGSDPQAMGQQNRGGVPGPSGGSGPGGV
GPGGPTPFNQNQLHQLRAQIMAYKMLARSQPLPDHLQMAVQGKRPMPGMQQQPGMPNMPP
SAGPGAGPGAGPGQPPANYNRPHAGMVGPNMPPPGPSGVPPGMQGQPTNGPPKQWPEGPM
VNAAAPSTAPQKLIPPQPTGRPSPAPPSVPPAASPVMPPQTQSPGQPSQPPPMVLHQKQN
RITPIQKPRGLDPVEILQEREYRLQARITHRIQELEHLPGSLAGDLRTKANIELKALRLL
NFQRQLRQEVVVCMRRDTALETALNAKAYKRSKRQSLREARITEKLEKQQKIEQERKRRQ
KHQEYLNSILQHAKDFKEYHRSITAKLQKATKAVATYHANTEREQKKENERIEKERMRRL
MAEDEEGYRKLIDQKKDKRLAYLLQQTDEYVANLTDLVRAHKADQALKDKKKKKKKKKKP
ENAEGQPPALGPDGEPLDETSQMSDLPVKVIHVDSGKILTGLDAPRAGQLDAWLEMNPGY
EVAPRSDSEDSGSEEEEEEEEEPQPSQAPTEEKKKIPDPDTEDVSEVDARYIIEEAKQDV
DDEYNSAEAAFARGLQSYYAVAHAVTETVDKQSSLLVNGQLKHYQIKGLEWLVSLYNNNL
NGILADEMGLGKTIQTIALITYLMEYKRINGPFLIIVPLSTLSNWVYEFDKWAPTVVKVS
YKGSPQARRAFLPILRSGKFNVLLTTYEYIIKDKQVLAKLRWKYMIVDEGHRMKNHHCKL
TVVLNTHYLAPRRLLLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEK
VDLNEEETILIIRRLHKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQA
KGVLLTDGSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQQIEESFSEHLGFTGGVVSGP
DLYRASGKFELLDRILPKLRATDHKVLLFCQMTSTMTIMEDYFAWRNFKYLRLDGTTKAE
DRGMLLKTFNDPASQYFVFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRI
GQRNEVRVLRLCTVQSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEH
EEQDEVGAQGGWRTGGALEEDEVPDDETVNQMIARSEEEFDQFMRMDLDRRREDARNPKR
KPRLMEEDELPTWIIKDDAEVERLTCEEEEEKMFGRGSRQRKEVDYSDSLTEKQWLKAIE
DGNLEDIEEEVRHKKTTRKRKRDRDDMPGPATPSSSGGGRSRDKDEEVKKGKKRGRPPAE
KLTPNPPSLTKKMKKVVDAVIKYRDGSNGRQLSEVFIQLPSRKELPEYYELIRKPVDFRK
IKERIRSHKYRSLNDLEKDVMLLCNNAQTFNLEGSLIYEDSIVLQSVFTSVRQKIEKEED
SEGEDSEEEEEEVDEGSESESRSVKVKIKLGRKEKDSRGKSQRRRGRGSRAKPVVSDDDS
EEEQEEAGSASGSEED
NT seq
4911 nt
NT seq
+upstream
nt +downstream
nt
atgtccacccccgacccccccatgggagggaccccccggccgggcccgtccccaggaccg
gggccatctccaggagccatgatgggacccagcccttccccaggctcggcccatagcatg
atgggacccagcccaggccctccagcctctggacacccccaccctcaacagggaccatca
ggatatcctcaggagaacatgcaccagatgcacaaacctatggaagggatgcatgagaag
ggcatgcctgacgaccctcgctacggacagatgaagggaatgggattgagaccagggggc
cacagtggaatgggacccccacccagccccatggaccaacattcccaaggatacccatct
ccgctggggggttctgagcatgctcccagccctgttccggccaatggccctccccctggc
ccaatgatgccgtccggccctggtggtgtccccatggagggcagtgacccccaggccatg
ggccagcagaaccgtggtggtgtcccaggcccgagtggtggttctgggcctggcggtgtg
gggccagggggacccacccctttcaaccagaatcagctgcaccagctccgggcccagatc
atggcctacaagatgctggcccgcagccagcccctaccagaccacctgcagatggcggtg
cagggcaagaggcctatgccaggtatgcagcagcagcccgggatgcccaacatgccccct
tcagctggtcctggggcagggcctggggcggggcccggacagcctccagcaaactacaac
agacctcatgcaggaatggtggggcccaacatgccacctccaggaccctcaggtgttcct
cctggcatgcagggccagcccaccaacggcccccctaaacagtggcctgaagggcccatg
gtgaatgctgctgctccttccactgctccccagaagctcattcccccacagcccactgga
cgaccctcccctgctcccccctctgttccccccgctgcctccccggtcatgcccccccag
acccagtcccctgggcagccctcccagcccccaccaatggtgctgcaccagaagcagaat
cgcatcacgcccatccagaagcctcgtggcctggacccagtagaaatcctccaggagaga
gagtacaggctgcaggctcgcatcacccaccgtatccaggagctggagcatctaccaggg
tctctggctggagacctccggaccaaagccaacatcgagctcaaggccctgcgactgctc
aacttccagaggcaactgcgtcaggaggtggtggtatgtatgcgtcgcgacacggccttg
gagacagcgctcaacgctaaggcctacaagcgcagcaagcgccagtccctccgcgaggca
cgcattactgagaaacttgagaagcagcagaagattgaacaggagcgcaaacgtcgccag
aaacaccaggaataccttaacagtattcttcagcatgctaaggactttaaggagtaccac
cggtcaatcacagccaagctccagaaggccactaaagccgtggccacgtaccacgccaac
acagagcgtgagcagaagaaggagaatgagcgcatcgagaaggagagaatgaggaggctg
atggccgaggatgaggagggctatcgtaagctcatcgaccagaagaaggacaagcgtctg
gcatacctgctgcagcagacagacgagtacgtggccaacctcaccgatcttgtccgagcc
cataaggctgatcaggccctcaaggacaagaagaagaagaaaaagaagaagaagaagcca
gagaatgcagagggccagcctcctgccctgggacctgatggagagcctctggatgagacc
agtcagatgagtgacctgcctgtgaaggtgatccacgttgacagtgggaagatcctgacg
gggctggacgccccccgcgctggccagctggatgcttggctggagatgaaccctgggtac
gaagtagctcctcgttccgacagtgaggacagcggctctgaggaagaagaggaggaagag
gaggagccccagccctcccaggctccaaccgaggagaagaagaagatcccagacccggac
acggaggacgtgtcggaggtggacgctcgctacatcatcgaggaggccaagcaggatgta
gatgatgagtacaacagcgcggaggcggcgtttgcccggggcctgcagtcctactacgct
gtggcccacgccgtcaccgaaacagtggataaacagtcctccctgctggtcaacggccag
ctgaagcattaccagatcaagggcttggagtggctggtgtctctgtacaacaacaaccta
aacggcatcctggctgatgagatgggtctcggcaagaccattcagaccatagccctaatc
acctacctcatggagtataagcgcatcaacggccccttcctgatcatcgttccgctctcc
actctgtccaactgggtgtatgagtttgataagtgggctccaaccgtggttaaagtttct
tacaaaggctcccctcaagcccgccgggccttcctccccatcctgcgcagcggcaagttc
aatgtgctgctcaccacctacgagtacatcatcaaagacaagcaggtgctggctaagctg
cgctggaagtacatgatcgtggacgagggccatcgtatgaagaaccaccactgtaagctg
accgtggttctgaacactcactacctggccccacgacgcctgctgctgaccggcaccccg
ctgcagaataagctgcctgagctctgggccctgctcaacttcctgctgcccaccatcttt
aagtcctgcagcaccttcgagcagtggttcaacgccccgttcgccatgacgggagagaag
gtggatctgaacgaggaagagaccattttgatcatccgtcgtttgcataaagtgctccgc
cccttcctgcttcgccggctgaagaaggaggtggaggcccagctccctgagaaggtggag
tatgtgatcaagtgtgacatgtcagccctgcagagggtgctgtaccggcacatgcaggcc
aagggagtgctgctcaccgacggctctgagaaagacaagaagggtaaaggaggcaccaag
accctgatgaacaccatcatgcaactgaggaagatctgtaaccatccatacatgttccag
cagattgaggagtctttctctgagcatttaggctttaccggaggtgtagtttcaggacct
gacctttaccgtgcatctgggaagtttgagctgctagaccgcatcctgcccaagttgagg
gccactgaccataaggtgctgctgttctgtcagatgacatccactatgaccatcatggag
gactactttgcctggcgcaacttcaagtacctccgtttggatggaaccaccaaggctgag
gaccgtgggatgctactgaagaccttcaatgacccggcctctcagtactttgtgttcctg
ctcagcaccagagctggagggctgggcctcaacctgcagtctgctgacaccgtcatcata
ttcgactctgactggaacccacatcaggacttgcaggcccaggaccgagcccaccgtatc
gggcagcggaacgaggtccgcgtgcttcgtctgtgcaccgttcaaagtgtggaggagaag
atcctggccgctgccaagtacaagctgaacgtggaccagaaggtcatccaggctggcatg
ttcgaccagaaatcgtcaagtcacgagcgccgtgccttcctgcaagccatcctggagcac
gaggaacaggacgaggtcggggcccaggggggctggcgcactgggggggcgttggaggag
gacgaggtgcctgatgatgaaaccgtcaaccagatgattgccaggagcgaggaggagttt
gaccagttcatgcgcatggacctggaccggcgccgcgaggacgcccgcaaccccaagagg
aagccccgtctgatggaggaggacgagctgcccacctggatcataaaggacgatgccgag
gtggagaggctcacctgtgaggaagaggaggagaagatgttcggccgcggctctcgccag
cgcaaggaggtggactacagtgactcgctcactgagaaacagtggctcaaggccatagag
gatgggaacctggaggacatcgaggaggaggttcgtcacaagaagaccactcggaagcgc
aagcgagaccgcgacgacatgcccgggccggccactcccagctccagcggtggaggccgt
agccgcgacaaggacgaggaggtcaaaaagggcaagaaacgcgggcgccccccagcagaa
aaactgaccccgaaccctccttcactcaccaagaagatgaagaaagtggtggacgcggtc
atcaagtaccgggacggcagcaatgggcgccagttgagtgaggtctttatccaactgccc
tcacgaaaggagctcccagagtactacgagcttatccgcaagcctgttgacttcaggaag
attaaggagaggatccgcagccataagtaccgcagtttgaatgacctggagaaggatgta
atgctgttgtgtaataatgcccagacctttaacctggagggctctctgatctatgaggac
tccattgtgctgcagtcagtcttcaccagcgtcaggcagaagatcgagaaggaggaggat
agtgaaggagaggatagtgaagaggaggaggaagaggtcgacgaaggctcggagtctgaa
tctcgttcagtgaaggtgaagattaagctggggaggaaggagaaggatagtagagggaag
agccagcgcagacgtggccgcggctcccgagccaaacctgtggtgagcgacgacgacagc
gaagaggagcaggaggaagcgggttcagccagcggcagtgaggaggactga
DBGET
integrated database retrieval system
