Esox lucius (northern pike): 105016417
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Entry
105016417 CDS
T04894
Symbol
ift88
Name
(RefSeq) intraflagellar transport protein 88 homolog isoform X1
KO
K16474
intraflagellar transport protein 88
Organism
els
Esox lucius (northern pike)
Brite
KEGG Orthology (KO) [BR:
els00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
els03037
]
105016417 (ift88)
Cilium and associated proteins [BR:
els03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex B1
105016417 (ift88)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_12
TPR_8
TPR_6
TPR_14
TPR_19
TPR_7
TPR_16
TPR_11
TPR_17
SNAP
ANAPC3
TPR_9
TPR_10
TPR-S
MIT
TPR_MalT
DUF6584
TPR_15
RNPP_C
DUF2225
SHPRH_helical-1st
DUF2989
Motif
Other DBs
NCBI-GeneID:
105016417
NCBI-ProteinID:
XP_010878538
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Position
LG16:complement(9532854..9548417)
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AA seq
860 aa
AA seq
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MEHVHLVAEEDDLYSGYNDYNPTFDAEELDNDAGFQQAVRTSHGRRPPMTAKFPGTSTGG
LTLGTSFGAETRFGSKNRLLKSRMPLASSMGRPMTGAVQEGTARPMTAVRAAGYSSAIIR
GSTFDPLGQSKGPAPPLEGKSEDTPDEKVKILEKKVNDLIEESCLAHGRGDLQLSLDRAK
EAGRKERALVRQREQSGNADHINLDLTYSVLFNLATQYANNDMYAEALNTYQVIVKNKMF
SNAGRLKVNMANIYFKQKNYPKAIKFYRMALDQISNSHKEMRIKIMQNIGVVFIRMGQYS
DAITSFEHIMSESPNIKSGFNLILCYYAIGDRDRMKKAFQKLICVPLGIDEEDKYIPPND
DTHANLVIEAIKNDKLHQMERERKTLAEKFIMTSAKLIAPAIEATFADGFDWCVEMVKSS
QYIELANDLEINKAITYLRQRDFNQLEAVETLKTFEKKDSRVKSAAATNLSFLYFLEKDF
DQADRYADLAMAADRYNPAALINKGNTVFVKNDREKAGEFYKEALRNDSSCTEALYNLGL
TYKRLGRLEDSLDCFLKLHAILRNSSQVMWQLASLYEMLEDPHQAIEWLMQLISVTPTDP
KVLAKLGELYDSEGDKSQAFQYYYESFRYFPSNIEVIEWLGAYFIDTQFCEKAAQYFERA
TLIQPNQVKWQLMVASCYRRSGNYQKSLETYKDIHRKFPENVECLRFLVRLCTDMGLKEV
QDYATKLKKAEKMKEIREQRVKSAREGSARNARREGSASSEVDIKPVSCPEPKHSPLLDQ
GQDSGHSSHGTSGKGERLSAKMRALPGSHEPYEASSQRDIDASYVDPLGPQIERPKTAAK
KRTEDDDFADEELGDDLLPE
NT seq
2583 nt
NT seq
+upstream
nt +downstream
nt
atggaacatgtgcatcttgttgctgaagaggatgacctgtactcgggctacaacgactac
aatccaacctttgatgcagaggagcttgacaatgatgctggttttcagcaagcagtgagg
acaagccatgggagaaggccacctatgactgccaagtttcctggcacttccactggtgga
ctgacattggggacctctttcggggctgagaccaggtttggcagtaagaacaggcttctg
aagtctaggatgccactggcgtcttctatgggtcgacccatgactggagctgtacaggaa
ggaacagctaggcctatgactgcagtcagagcagctggctactcttcagccataatcaga
ggttctacatttgacccgctgggtcagtccaaaggtccggctcctccattagagggaaaa
agtgaagatactccggatgagaaggtgaagatcctggagaagaaggtgaacgatctgatt
gaggaaagctgccttgcgcacggccgtggtgacctacagctgtccttagatagagctaag
gaggcaggacggaaggagagagcactggtgagacagagagagcagtcaggcaatgccgac
cacatcaacttggacctcacctattcagtcttgtttaacttggcaactcagtatgctaac
aatgacatgtacgcagaagcccttaacacctaccaggtcattgtgaagaacaagatgttc
agtaatgccggaaggttaaaagtgaacatggccaacatttacttcaagcaaaagaactat
ccgaaggccatcaagttctaccgaatggccctggaccagatctccaactcccacaaggag
atgaggatcaagatcatgcagaacattggcgtggtcttcatccgcatgggccagtactcg
gacgccatcacctcctttgaacacatcatgagcgagagccccaacattaagtcaggcttc
aacctgatcctgtgttactacgccattggggacagagataggatgaagaaggcctttcag
aagcttatctgtgttcctctagggatcgacgaagaggacaagtatattccgcccaacgat
gacacccatgccaacctggtgattgaagccataaagaatgacaagcttcaccagatggag
agagaacggaaaacactggctgagaaattcatcatgacatcagccaagctcatcgctccc
gccatcgaggcgacgttcgccgacggttttgactggtgtgtggaaatggtgaagagctcc
cagtacattgaactggccaacgatctggagattaacaaagccattacctacctgagacag
agggacttcaatcagctcgaggctgtggagacactgaagacgtttgagaagaaagacagc
cgagtgaagagtgctgcagccaccaacctctccttcctctacttcctagaaaaggacttc
gaccaggctgaccgttacgctgacctggccatggccgcggaccgctataacccagcggcg
ctcatcaacaagggcaacacggtcttcgtgaagaacgaccgcgagaaagctggcgagttc
tacaaggaggctctccggaatgactcgtcctgcaccgaggccctgtataacctgggtctg
acttataagcgtctggggcgcctggaggattccctggactgtttcctgaagctccacgcc
atcctgaggaacagttcacaggtgatgtggcagctggccagcctctatgagatgttggag
gacccccaccaggccatagaatggctgatgcagctgatcagtgtgacgcccacagacccc
aaggtgttggctaaactgggagagttgtacgatagcgagggagacaagtctcaagccttc
cagtactactatgagtccttcagatattttccctcaaacattgaggttattgagtggctg
ggggcctacttcattgacactcagttctgtgagaaggctgcccagtactttgagagagcc
acactcatccagccaaaccaagtgaagtggcagctgatggtggccagctgctacagacgg
agtggaaactaccagaaatccctagagacttacaaggacatccaccggaaattcccagaa
aacgttgaatgcctgcgttttctggtgaggctatgcacagacatggggctgaaagaggtc
caggattatgccaccaaactaaagaaggcggagaagatgaaggagatcagggaacagcgg
gtgaagtcggcgagggagggcagtgccagaaatgcccggagagagggcagcgccagcagt
gaggtggatatcaaaccagtttcttgccctgagcctaaacacagtcctctattggaccag
ggacaagatagtggacacagcagtcatggcaccagtggaaagggggagagactgagtgcg
aagatgagggcactgccaggctcccatgaaccctatgaggccagcagccagcgagacata
gatgcctcatatgtggatccattgggaccccagatagagagaccaaagactgctgccaag
aagcggacagaggatgatgactttgcagatgaagagttgggagatgacctacttccagag
tag
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