KEGG   Esox lucius (northern pike): 105019248
Entry
105019248         CDS       T04894                                 
Name
(RefSeq) collagen alpha-1(I) chain
  KO
K08131  collagen type IX alpha
Organism
els  Esox lucius (northern pike)
Pathway
els04510  Focal adhesion
els04512  ECM-receptor interaction
els04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:els00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    105019248
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    105019248
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    105019248
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00535 Proteoglycans [BR:els00535]
    105019248
Proteoglycans [BR:els00535]
 Extracellular matrix (ECM) proteoglycans
  Others
   105019248
SSDB
Motif
Pfam: Collagen
Other DBs
NCBI-GeneID: 105019248
NCBI-ProteinID: XP_010883581
UniProt: A0A3P8XZA8
LinkDB
Position
LG20:complement(29923477..29937628)
AA seq 654 aa
MGVPTVKVSLVSWLLAFLLCVLPSHAQEHYSGHHSGDEHTYEGSLVDSYEHSGYPHPVEY
TPEPTYSYEEENHDRYAPDPTTVTMITEEPYPYTTTTQEPYEQEPYFEESLQAPGGGEAS
HGEEGPTDCNCEPGEPGFAGFAGPKGAKGPQGKEGLPGPQGREGYKGFKGVRGRGGDTGP
EGDSGPDGEDGASGFSGAQGLPGPPGDPGETGELGLKGEIGMEGPRGGVGLPGGTGPVGD
TGPAGSAGTKGIKGSSGVEGRQGPEGAEGEKGQMGAPGFSGDHGEMGYTGYPGETGGRGE
TGPKGDQGPGGMPGSDGEPGEDGPLGVPGVIGFPGEFGQKGTKGDRGVSGPPGRIGAGGL
QGETGDAGVPGKPGPKGLQGQPGSKGETGSDGEKGGPGKTGLKGGKGDKGSFGARGDKGQ
QGGRGRIGPDGIVGRVGPHGIPGSRGEPGPVGDLGVKGGSGPKGVPGAPGPGLTDEQVLQ
LCRGVVTAQISQYASAIRAKCSQGCPVNNRTLIGPPGTRGPTGEPGKPGKAGKSGAKGAS
GLQGDIGVEGQKGADGERGTKGLKGKRGEPGNGLPGHDGHQGLRGLPGHPAEPKNGMEGP
RGARGFPGAVGQPGMAGDAGVPGFCEARDCSIHAPVMRKEQGLVKGPHNLSPKI
NT seq 1965 nt   +upstreamnt  +downstreamnt
atgggagtcccgacggtgaaggtgtctttggtctcgtggctcctcgcctttctgttgtgc
gtcctcccctcccacgcacaggaacactactctggtcaccactcaggtgatgagcacacc
tatgagggctccttggtcgacagctatgagcattcaggatacccacacccagttgaatac
acaccggagcccacttacagctatgaggaggagaaccacgaccgctatgcaccagacccc
accactgtgaccatgataacagaggaaccctatccttacaccaccactacacaggagccc
tatgaacaggagccctactttgaggagtcactccaggccccaggtggtggggaggcttct
catggggaggaggggcctacagattgtaactgtgagccaggagagccagggttcgctggg
tttgcaggacccaagggagccaaagggccgcagggtaaagagggcttacctgggcctcag
ggacgggagggctacaaaggatttaaaggtgttcgaggaagaggaggagacacagggcct
gagggtgactccgggcctgatggggaggatggtgcctctggtttctctggagctcagggc
ttgccaggtcctccaggtgatccaggtgagactggggagttagggctaaagggtgagatt
ggcatggagggaccacgtggaggagtagggcttccgggtgggactggtccagttggtgac
acgggccctgctggttctgctggaacgaaaggcatcaagggatccagtggagtagaaggc
agacagggtcctgagggagcagaaggggaaaagggtcagatgggagcccctggattctct
ggagaccatggggagatgggctatactgggtatcctggggagacgggtggcaggggagag
accggtcccaagggggaccaaggtccagggggcatgccaggcagtgatggggagcctgga
gaggatggtcctcttggagttcctggggtgattggttttcctggagagtttggacaaaag
ggcacaaaaggggatcgtggtgtgagtggacctcctggcagaattggagctgggggcctt
caaggagagacaggagatgcaggagttcccgggaagcccggccccaaaggcctgcagggc
caacccggatccaaaggggaaaccgggtccgatggtgagaagggcgggcctggaaaaaca
ggcttgaagggggggaaaggagataagggaagttttggtgctcgtggtgacaaaggacag
caagggggcagaggtcgtatcggtcctgatggaatcgttggacgagttggaccccacggt
atcccaggctccagaggagagccaggtccagttggtgacctcggtgtcaaaggtggctcg
ggaccaaaaggagtgccaggtgcccctggccccggactgacagatgagcaggtgttgcag
ttgtgtaggggagtggtgaccgcacagatctcccagtatgcctcagccatcagggccaag
tgttctcagggatgccccgttaacaaccgaacactcattggaccgccaggaaccagagga
ccaactggggaaccaggcaaacctggtaaagcaggcaaatctggggccaaaggagccagt
ggcctccagggagacattggcgtggaggggcaaaaaggggcagatggtgaaagaggaacg
aagggtctgaaaggaaagaggggtgagcctggtaatggtctccctggacatgatggacac
caaggcctcagagggttgccaggtcacccagcagagccaaagaatggtatggagggtcct
agaggagcacgtgggttccctggcgctgtgggccagcctggcatggcgggagatgctgga
gtgcctggcttctgcgaggcacgggactgcagcattcacgcaccagtgatgcgcaaggag
cagggcctggtgaagggaccccacaatctaagccccaagatctaa

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