Esox lucius (northern pike): 105028005
Help
Entry
105028005 CDS
T04894
Name
(RefSeq) calpain-1 catalytic subunit
KO
K01367
calpain-1 [EC:
3.4.22.52
]
Organism
els
Esox lucius (northern pike)
Pathway
els04141
Protein processing in endoplasmic reticulum
els04210
Apoptosis
els04217
Necroptosis
els04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
els00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
105028005
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
105028005
04217 Necroptosis
105028005
04218 Cellular senescence
105028005
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
els01002
]
105028005
Enzymes [BR:
els01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.52 calpain-1
105028005
Peptidases and inhibitors [BR:
els01002
]
Cysteine peptidases
Family C2: calpain family
105028005
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C2
Calpain_III
EF-hand_6
EF-hand_1
EF-hand_8
EF-hand_7
Motif
Other DBs
NCBI-GeneID:
105028005
NCBI-ProteinID:
XP_019902070
LinkDB
All DBs
Position
LG05:2794113..2811199
Genome browser
AA seq
702 aa
AA seq
DB search
MSGGISASIASGRLRAEGMGEHDRAIPFLNQDFEALHLECLETGCLFEDPIFLAEPPSLG
FKELAPYSAKTRGVEWMRPTELNDDPQFILGGATRTDICQGALGDCWLLAAIASLTLNER
LLHRVVPHGQSFQNDYAGIFHFQFWQFGEWVDVVIDDRLPTKDGELMFVHSAEGNEFWSA
LLEKAYAKLNGSYEALSGGSTTEGFEDFTGGVSEMYELRKAPQGLYRIIGKALDRGSLLG
CSIDITSAFDMESVTFKKLVKGHAYSVTGLKQVDYRGQTERLIRVRNPWGQVEWTGAWSD
NSAEWDEIDPSEREDLHLQMEDGEFWMSFQEFLRQFSRLEICNLTADALSEDSLSHWNTI
KFHGMWRRGSTAGGCRNHPSTFWINPQYKITLLEEDDDPEDDEVACSFLVALMQKDRRRY
RKQGQDMHTIGFAIYEIPEEFRGCQNVHLKKDFFLTHSSCARSETFINLREVSNRLRLPP
GEYLIVPSTFESGKEADFVLRVFTEKQSETEELDDEISADLEDEENITEADIDDSFKSMF
AQLAGEDMEISVHELRTILNRVVTRHKDLQTDGFSMESCRTMVNLMDKDGSARLGLIEFQ
ILWNKIRKWLAVYRQFDLDKSGSMSSYEMRLAVESAGFKLNNRLNQILVARYAENEAIDF
DNFICCLVKLEAMFRSFQQLDKEGKGIAEMNITEWLYMTMCG
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
atgtcagggggtatctctgctagcatagccagcggcagactgcgagccgaagggatggga
gaacacgaccgagccatcccattcctcaaccaggactttgaggctctccacctggagtgt
ctggagactggctgtctgtttgaggatcctatcttcctggctgaacctccctctctgggc
ttcaaggaactggccccgtattctgccaagaccaggggtgtggaatggatgagacccacg
gaactgaatgatgaccctcagttcatcctgggaggagcgaccaggacagacatctgccag
ggagcgttaggtgactgctggctcttagctgccatagcctccctgaccctgaatgagagg
cttctccacagggtggtccctcatggccagtcattccaaaacgactatgctggaatcttt
cactttcaattctggcagtttggggagtgggtggacgtggtcatagatgaccggctgccg
acaaaggacggagagctcatgtttgtccactcagccgagggcaatgagttctggagcgcc
ctgctggagaaggcctacgccaagctgaacgggagctacgaggccctgtcggggggcagc
accacagaaggcttcgaggacttcaccggaggtgtgtctgagatgtacgagctccgtaag
gctccacagggcctgtacaggatcatcggcaaagccctggacaggggttctctgttgggc
tgctctattgatatcaccagtgcctttgacatggagtctgtgaccttcaagaagctggtg
aaaggtcatgcttactcagtcactggactgaagcaggtggactaccggggccagacagag
aggctgatcagggtgcgcaacccttggggacaagtggagtggaccggggcctggagtgac
aattctgcagagtgggatgagatagatccgtctgagagagaggaccttcatctacagatg
gaggacggagagttctggatgtcgtttcaggagttcctgcgacagttctcccgtctggag
atctgcaacctgacagcggacgccctgagtgaagacagcctgagtcactggaacaccatc
aagttccacggcatgtggaggagggggagcacagccgggggctgcaggaaccatcccagt
acattctggatcaacccccagtataaaatcactctgctggaggaggacgatgacccggag
gatgacgaggtggcctgcagcttcctggtggcgttaatgcagaaggaccgacggcggtac
cggaaacaggggcaggacatgcacactattgggtttgccatctacgagattccggaggag
ttccggggctgtcagaacgtgcacctgaagaaagacttcttcctgacccactcgtcgtgt
gctcgctccgagaccttcatcaatctgagagaggtcagcaatcgccttcgtcttcctccg
ggagaatacctcattgtcccgtccacttttgagtcgggcaaggaggccgactttgtcctg
cgagtcttcactgagaaacaatccgagacagaggagctagatgatgaaatctctgccgac
ctggaggatgaggagaacatcacagaggcggacattgatgactctttcaagtccatgttt
gcccagctggcaggagaggatatggagatttctgttcatgagctaaggaccatcctgaac
cgagtggtgacccgacacaaagacctgcagactgacggctttagcatggagtcctgcagg
acgatggtcaatctcatggataaagatgggagtgcccgtctgggcctgattgagttccag
atcttgtggaataagatcaggaagtggctggctgtttaccgacaatttgacctggacaag
tctgggtccatgagctcatatgagatgagacttgctgtggagtcggcaggttttaaactg
aacaatcgattaaatcagatcctggtggcacgctatgctgagaacgaggccatagacttt
gacaacttcatctgctgtctggtgaaactggaagccatgtttagatcattccagcagctg
gacaaagagggaaagggtatagctgagatgaatatcactgagtggctttacatgaccatg
tgtggttga
DBGET
integrated database retrieval system