Esox lucius (northern pike): 105028635
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Entry
105028635 CDS
T04894
Symbol
herc4
Name
(RefSeq) probable E3 ubiquitin-protein ligase HERC4 isoform X1
KO
K10615
E3 ubiquitin-protein ligase HERC4 [EC:
2.3.2.26
]
Organism
els
Esox lucius (northern pike)
Pathway
els04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
els00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
105028635 (herc4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
els04121
]
105028635 (herc4)
Enzymes [BR:
els01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
105028635 (herc4)
Ubiquitin system [BR:
els04121
]
Ubiquitin ligases (E3)
HECT type E3
105028635 (herc4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
RCC1
RCC1_2
Motif
Other DBs
NCBI-GeneID:
105028635
NCBI-ProteinID:
XP_012987588
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All DBs
Position
LG06:complement(29895239..29929411)
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AA seq
1051 aa
AA seq
DB search
MLCWGNASFGQLGLGGIDEEIVVEPRNCDFFQGKQICDIGCGRRHTTFLLGDGTVYTCGC
NDLGQLGHEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVFAWGLASDGQLGLSN
FEECVRVPRNLKSLSDVQIVQVACGYRHSHALSRGGQVYSWGQNRYGQLGLGSAGQGVST
PQVIQSLQGIPFLQISAGGAHSFALTLSGAVFGWGRNNFGQLGLNDNNDQYYPALLKSLR
SQRVIYVCCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTNHEINPRKVFELMGNVVTQIA
CGRQHTLAFIPSSGKIDSFGLGGNGQLGTRSTSNRNSPAPVKGPWVAYNGPTPTSTDMEQ
GCWVKRIYAGGDQSFAHYYTPENSLVPNDVREPDPRRQICTLSADLAQRWLDHYTPGRLP
QEISNEIDLLFSSASCLNGSFLAGSHPDHYNTSSKCSGVDMNMARLLFHRVVQHDYPEIT
QQIAASLEKNLIPRLSSSPPDIEALRLYLTLPECPLFSDRNTYITLAIPFAKALVSLKAA
PLKVLGNWWSKFEAPVFQRLVELYKDVVVYLLRMHKVGIPHSEQRVFTCFLDTSLKLLEM
LHAVNERDGHIIQYDKFYIHELDDLIDIRNDYITWIQQQMYSMAHDSAVTLCKYPFVFDA
QAKTTLLQTDAVIQMQMAVDQAQRQNFSSMFLPVVVESVNPCLILIVRRENIVGDTMEVL
RKSKNVDYKKPLKVIFVGEEAVDAGGVRKEFFLLIMRELLDPKYGMFRYYEESRLIWFAN
KTFEDIDLFHLVGVICGLAIYNLTIVELHFPVALYKKLLKRKPTLEDVKELMPDVGRNLQ
QLLDYTEDDVEEIFCLNFTITVENFGATEVLELVPNGLDISVDNSNRSEFVAAYVDYIFN
RSVAPLFEAFHAGFHKVCGGKVLELFQPNELQAMVIGNTNYDWKELEKSTEYKGEYWAEH
PTIKIFWEVFHDLSLEKKKLFLLFLTGSDRIPILGMKSLKLVIQPTGGGEHYLPVAHTCF
NLLDLPKYSSRETLQDKLLQAIDHNQGFNLA
NT seq
3156 nt
NT seq
+upstream
nt +downstream
nt
atgctgtgttggggaaatgcttccttcggtcagctaggtttgggtgggatcgatgaggag
attgtggtggaaccccggaactgtgatttctttcaggggaagcagatttgcgatattggg
tgtggccgacggcacactacatttctactgggagacgggactgtatacacatgtggctgc
aatgaccttggtcaacttgggcatgagaagtctcggaagaaaccagagcaggttgtggca
ctagatgcacagaacattgtggcggtatcatgtggggaggcccatactctcgcgttgaat
gacaaaggacaagtgtttgcatggggcttggcctctgatggacagctgggtctttcaaac
tttgaagaatgtgtccgtgtgcccagaaacctcaagagcttatcagatgtacaaattgtt
caggtagcctgtggatatcggcactcccatgctctgtcgagaggaggccaagtctattca
tggggacaaaaccgatatggacaactgggactgggatcagcaggacaaggtgtctctact
cctcaagtcatccagtctttacaggggattcccttccttcagatatctgctgggggggct
cacagctttgcccttacactctcaggagctgtctttggttgggggcgcaacaactttggt
caactgggcctcaatgacaataacgatcaatattatccagctctgctcaagtctcttagg
tcacagagggtcatctatgtctgctgtggggaggaccacactgctgcactaacaaaggaa
ggaggcgtgtttacatttggagcaggaggttatggccagcttggacacaactctacaaac
catgagattaaccccaggaaggtgtttgagcttatgggaaatgttgtgacacagattgct
tgtggacgacagcacactttggccttcatcccctcgtccgggaagattgattcatttggt
ctgggagggaacggacagctgggtactcgctccacctcaaacaggaacagccctgcccca
gtcaaagggccctgggtagcctacaacggtccaactcccaccagtacagacatggagcag
ggctgttgggtgaagaggatatatgctggaggtgaccagagctttgcccactattacacc
cctgagaattctctggtccccaatgatgttagagaaccagatcccagaagacaaatatgt
accttatcggctgatctcgctcagagatggcttgaccactatacacccggaagactcccg
caagagatttcaaacgagattgatctgctgttttcatctgcaagttgcctcaatggaagc
tttctggctgggagccatcctgatcactacaacacaagcagtaaatgctcaggtgttgat
atgaacatggcgcgtctcctgtttcacagagttgttcaacatgactatccagaaatcaca
cagcagattgcggccagtctagagaagaacctgattcccaggctaagcagctcccctcca
gacatcgaggctctgagactctacctcactctgcctgaatgccctctcttcagtgaccga
aacacatacataactctggccatcccgtttgccaaggcactcgtcagtcttaaagctgct
ccactaaaagtgcttggtaactggtggtctaaatttgaggccccagtcttccagaggctg
gtggagctttacaaggacgtggtggtgtatctactcaggatgcataaggtgggaattccc
cactccgagcagcgggttttcacctgcttcctggatacatctctcaagctcctggaaatg
ctacatgctgtgaatgaaagagacggacatatcatacagtacgacaaattctacatccat
gagttggatgaccttatagacatccgaaacgactatatcacttggattcaacaacagatg
tactcaatggctcacgacagtgcggtcacgctgtgtaaataccctttcgtgtttgatgcc
caggcaaagaccaccctgctccagactgacgccgttatacaaatgcagatggctgtagac
caggcgcagcggcagaacttcagctccatgttcctgcccgtggttgtggagtcagtgaac
ccttgcctcatcctcatcgtacgaagggaaaacattgttggcgataccatggaggtcctc
cgaaagtccaaaaacgttgactacaagaaacctctgaaggtgatattcgtcggagaggaa
gcggtcgatgccggcggggtgaggaaggaattcttcctactgatcatgagggaactcctg
gacccaaagtatgggatgttccgatattacgaggagtccaggttgatctggtttgcgaac
aagacatttgaggacattgacctgttccacctggttggggtcatctgtgggctggctatc
tacaacctcaccattgtggagctccacttcccggtagccctctacaagaagctcctaaag
aggaaacccacattggaggatgttaaggagctgatgcctgatgtgggcaggaatctgcag
cagttactggactacactgaagatgatgttgaagaaattttctgcttgaacttcacaatt
acagtggaaaactttggtgccacagaagtcctggaactggtccccaacggcttggatatc
tctgttgacaattccaacaggtcagaatttgtcgccgcatatgtggactacatcttcaac
agatccgtcgccccgctcttcgaagcctttcatgcaggcttccacaaagtgtgcggtggg
aaggttctggagctgtttcagcccaatgaacttcaagctatggtcatcggcaacaccaac
tacgactggaaggagcttgaaaagagcactgagtacaaaggagagtactgggctgaacat
cctaccatcaagatcttctgggaggtgttccatgatttatctttggagaagaagaagctg
tttctcttgtttctcaccggtagtgaccgtattcccatcctggggatgaaaagcctaaag
cttgtgatccagcctacgggaggtggggaacactacctgccagtggcacacacctgcttc
aacctactggacctgccaaagtacagcagccgagagactctccaggacaaacttctccag
gccatagaccacaatcaaggtttcaacctggcctga
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