Esox lucius (northern pike): 105030479
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Entry
105030479 CDS
T04894
Symbol
top3a
Name
(RefSeq) DNA topoisomerase 3-alpha
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
els
Esox lucius (northern pike)
Pathway
els03440
Homologous recombination
els03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
els00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
105030479 (top3a)
03460 Fanconi anemia pathway
105030479 (top3a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
els03032
]
105030479 (top3a)
03400 DNA repair and recombination proteins [BR:
els03400
]
105030479 (top3a)
Enzymes [BR:
els01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
105030479 (top3a)
DNA replication proteins [BR:
els03032
]
Eukaryotic type
DNA Topoisomerases
105030479 (top3a)
DNA repair and recombination proteins [BR:
els03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
105030479 (top3a)
FA (Fanconi anemia) pathway
105030479 (top3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
zf-GRF
Toprim
zf-C4_Topoisom
zf-C2H2_10
Zn_ribbon_recom
Lar_restr_allev
Motif
Other DBs
NCBI-GeneID:
105030479
NCBI-ProteinID:
XP_012991437
LinkDB
All DBs
Position
LG11:complement(4113283..4125252)
Genome browser
AA seq
1033 aa
AA seq
DB search
MRIHQLARALFTSRRSIHLELFRRLNFAGPNCSDSAGPGDMIRRTQVKRVLCVAEKNDAA
KGIADIMSNGRMRRMEGLSVYNKLYEYEYNLFGQNVTVCMTSVSGHLLGMEFKAPFQKWH
SCNPVQLFDAEVEKYCPENSVQIKRTLEAEVRKCQALVIWTDCDREGENIGFEVIDVCRA
VKPVLQVFRARFSEITPNSIRRACDTLTEPDINVSDAVDVRQELDLRIGASFTRFQTLRL
QKIFPASLANQLISYGSCQFPTLGFVVERFKSIQAFIPETFYKIKVLHEVDEECVEFSWK
RNRLFNHTACLVLYQICMEDPIATVISVSSKPKSKWRPLPLDTVEMEKLASRKLKISAKE
TMKIAEKLYTQGLISYPRTETNQFPKDLALGPLVEHQIPSPQWGGFARGVLEQPGGPNPR
QGTKTDQAHPPIHPTKYTDALQGNEQRLYEFIVRHFLACVSQDAMGQETVVDLDIADERF
SANGLMIIKRNYLDVYPYDRWSAKVIPVYEVGSQFQPSAIEMVDGQTSPPQLLTEADLIS
LMEKHGIGTDATHADHIETIKSRMYVGLTADQRFLPGELGMGLVEGYNSMGYEMSKPDLR
AELEADLKLVSEGRKDKQGVLLHHINKYKAVFIESVKKAKRLDEALSAYLGAAQEFTESE
QQDLEIPLPVRKCPQCGRDMVLRRRKEGNGKYLTCVGYPECKCSVWFPDTVLEVSRDESV
CSTCQPSPVHMLKFKFRRGSLPPTMPLEFLGCIGGCDETLREVLNLKYLRMAGGGPAGGR
ARRDPPPAQRSRPAAPRPDPLPSQTPNPSSSWPGRPRADAQAPPPAPSAGDITVCNCGSE
ALLLTVRKDGPNQGRQFYKCSSGGCNFFLWADQPDTPPPDRQGAPPARPQQPPRISAGFG
NVGVGGGAPGDVVCNCSEPAVQRTVQKEGPNKGRLFHTCGRPREQQCGFFLWADENVPPP
GPGGYRGGGRGGYDEGGQGGYGGGERGGYGGGDAGKRGRKTGGGGAPTATAKKPRTCGIC
HAPGHTRATCPQR
NT seq
3102 nt
NT seq
+upstream
nt +downstream
nt
atgcggatacaccagctggccagggctttatttacatccagaaggtcgatacatctcgag
ttgttccggaggcttaactttgccgggccgaattgttcagattcagcgggacctggagac
atgatccggaggacccaggtcaaacgtgttctctgtgtggccgagaagaatgacgcggcc
aagggaatcgcagacattatgtcgaacggcagaatgaggaggatggagggcctgtccgtc
tataataaactgtatgagtatgaatacaatctgtttggacagaacgttacagtgtgtatg
acatcggtatcaggtcatcttcttggtatggagttcaaagcgccattccagaaatggcac
agctgtaatcctgtgcagctgtttgatgctgaggtggagaagtactgtcctgagaactct
gttcagatcaagcgtaccttagaggctgaagtgagaaagtgtcaggcgttggtcatctgg
acagactgtgacagagaaggagagaacatcggctttgaggtcatcgacgtctgcagagca
gtgaagccggtgttgcaggtgttccgtgcacggttctccgagatcactcccaattccatc
cgacgggcgtgtgacacattaacagaaccggacatcaacgtcagcgacgccgtggacgta
cgccaagaactggacctcaggataggtgcgtccttcaccaggttccagacactccgccta
cagaagatcttcccagcatcgttggccaatcagctgatctcttacggcagctgtcagttc
cctactctgggctttgtggttgaacgcttcaagtctatccaggccttcataccagaaacc
ttctacaagatcaaagttctccatgaggtagatgaggagtgtgtagagttcagctggaag
aggaaccgacttttcaaccacaccgcctgtctggtactctaccagatctgtatggaggat
cccatagcaactgtaatctcagtatccagtaaacccaaaagcaagtggagaccacttccc
ctggacactgtggaaatggagaagctggcttccaggaagttgaagatcagtgccaaggag
accatgaagattgctgagaaactttatacgcaggggctgatcagctaccctcgtactgag
accaaccagtttcctaaggacctggctctgggtcctctggtggagcaccagatcccaagt
ccccagtggggaggctttgccaggggggtgttggagcagccgggggggccaaaccctcga
caggggaccaagactgaccaggcccatccccccatacaccccaccaagtacacagacgca
ctgcagggcaacgagcaacgcctttatgagttcatcgtgcgccatttcctggcatgtgta
tcccaggatgccatggggcaggagaccgtggtggatctggacatagctgacgagaggttc
tccgctaacggactcatgatcatcaagaggaactatctggatgtctacccctatgaccgc
tggagcgctaaggtgattccggtttatgaagtgggcagccagtttcaaccgtccgcaatc
gagatggtcgatggtcagacctcccctcctcaactcctcaccgaggcagacctcatttca
ctcatggagaaacatggcattggaacggatgcaacccacgcggaccacatcgagaccata
aagagtcgcatgtatgtggggctgaccgctgaccagaggttcctgccaggggaactgggc
atgggcttagtagagggttataactccatggggtatgagatgtctaaaccagacctgagg
gcggagctggaggcggacctgaagctggtgtcggaggggaggaaggacaaacagggcgtg
ttgcttcaccacatcaacaaatacaaggccgtcttcatagaatctgtcaagaaggccaag
aggttggacgaggctctgtcggcctatctgggcgcggcccaggagttcacggagtcagag
cagcaggatttggagattcctctccctgtcaggaagtgtcctcagtgtgggcgggacatg
gtgctgcgaagaagaaaggaggggaatgggaagtacctgacctgcgttggttacccagaa
tgcaagtgttctgtctggtttcctgacaccgtactagaggtcagcagagatgagtctgtc
tgttccacctgtcagccgagccctgtacacatgttaaagttcaagttccgccggggcagc
cttccccccacgatgcctctggagtttttgggctgcatcggggggtgtgacgagacactg
agggaagtgctcaacctgaaataccttcgaatggcaggaggagggccggcggggggacga
gcgagacgagacccccctcctgcccagagatctcgcccagcagcccccagaccagacccc
ctgccctctcaaacccccaacccttcctcctcctggcctggccgcccgcgggctgacgcc
caggcccctccccccgcacccagcgccggtgacatcacagtgtgtaactgcgggtcggag
gcgctgctcctcaccgtgcgtaaagacggacccaaccaaggacgccagttctacaagtgt
tcctcagggggctgtaacttcttcctgtgggccgaccagcccgacactccacctccagac
cgccagggggcgccacctgccagaccacagcagcccccgaggatttcggcggggtttggg
aacgtgggggtcggtggaggggccccgggggacgtggtgtgcaactgcagcgagccggcc
gtgcagcggacagtgcagaaggaggggcctaataaaggacggctgttccatacctgcggg
aggcccagagaacagcagtgcgggtttttcctctgggccgatgagaacgtaccaccacca
ggtcccggagggtatcgtggaggggggcgggggggttatgatgaagggggccaggggggt
tatggaggaggggagcgggggggttatggtgggggagacgcggggaagagggggaggaaa
actggcggtggaggagccccgaccgccacggccaagaaaccccgtacctgtggcatctgt
cacgcgccgggacatactcgcgccacctgccctcagcgctga
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integrated database retrieval system