KEGG   Esox lucius (northern pike): 105030479
Entry
105030479         CDS       T04894                                 
Symbol
top3a
Name
(RefSeq) DNA topoisomerase 3-alpha
  KO
K03165  DNA topoisomerase III [EC:5.6.2.1]
Organism
els  Esox lucius (northern pike)
Pathway
els03440  Homologous recombination
els03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:els00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    105030479 (top3a)
   03460 Fanconi anemia pathway
    105030479 (top3a)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:els03032]
    105030479 (top3a)
   03400 DNA repair and recombination proteins [BR:els03400]
    105030479 (top3a)
Enzymes [BR:els01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.1  DNA topoisomerase
     105030479 (top3a)
DNA replication proteins [BR:els03032]
 Eukaryotic type
  DNA Topoisomerases
   105030479 (top3a)
DNA repair and recombination proteins [BR:els03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Bloom's syndrome complex (BTR)
     105030479 (top3a)
   FA (Fanconi anemia) pathway
     105030479 (top3a)
SSDB
Motif
Pfam: Topoisom_bac zf-GRF Toprim zf-C4_Topoisom zf-C2H2_10 Zn_ribbon_recom Lar_restr_allev
Other DBs
NCBI-GeneID: 105030479
NCBI-ProteinID: XP_012991437
LinkDB
Position
LG11:complement(4113283..4125252)
AA seq 1033 aa
MRIHQLARALFTSRRSIHLELFRRLNFAGPNCSDSAGPGDMIRRTQVKRVLCVAEKNDAA
KGIADIMSNGRMRRMEGLSVYNKLYEYEYNLFGQNVTVCMTSVSGHLLGMEFKAPFQKWH
SCNPVQLFDAEVEKYCPENSVQIKRTLEAEVRKCQALVIWTDCDREGENIGFEVIDVCRA
VKPVLQVFRARFSEITPNSIRRACDTLTEPDINVSDAVDVRQELDLRIGASFTRFQTLRL
QKIFPASLANQLISYGSCQFPTLGFVVERFKSIQAFIPETFYKIKVLHEVDEECVEFSWK
RNRLFNHTACLVLYQICMEDPIATVISVSSKPKSKWRPLPLDTVEMEKLASRKLKISAKE
TMKIAEKLYTQGLISYPRTETNQFPKDLALGPLVEHQIPSPQWGGFARGVLEQPGGPNPR
QGTKTDQAHPPIHPTKYTDALQGNEQRLYEFIVRHFLACVSQDAMGQETVVDLDIADERF
SANGLMIIKRNYLDVYPYDRWSAKVIPVYEVGSQFQPSAIEMVDGQTSPPQLLTEADLIS
LMEKHGIGTDATHADHIETIKSRMYVGLTADQRFLPGELGMGLVEGYNSMGYEMSKPDLR
AELEADLKLVSEGRKDKQGVLLHHINKYKAVFIESVKKAKRLDEALSAYLGAAQEFTESE
QQDLEIPLPVRKCPQCGRDMVLRRRKEGNGKYLTCVGYPECKCSVWFPDTVLEVSRDESV
CSTCQPSPVHMLKFKFRRGSLPPTMPLEFLGCIGGCDETLREVLNLKYLRMAGGGPAGGR
ARRDPPPAQRSRPAAPRPDPLPSQTPNPSSSWPGRPRADAQAPPPAPSAGDITVCNCGSE
ALLLTVRKDGPNQGRQFYKCSSGGCNFFLWADQPDTPPPDRQGAPPARPQQPPRISAGFG
NVGVGGGAPGDVVCNCSEPAVQRTVQKEGPNKGRLFHTCGRPREQQCGFFLWADENVPPP
GPGGYRGGGRGGYDEGGQGGYGGGERGGYGGGDAGKRGRKTGGGGAPTATAKKPRTCGIC
HAPGHTRATCPQR
NT seq 3102 nt   +upstreamnt  +downstreamnt
atgcggatacaccagctggccagggctttatttacatccagaaggtcgatacatctcgag
ttgttccggaggcttaactttgccgggccgaattgttcagattcagcgggacctggagac
atgatccggaggacccaggtcaaacgtgttctctgtgtggccgagaagaatgacgcggcc
aagggaatcgcagacattatgtcgaacggcagaatgaggaggatggagggcctgtccgtc
tataataaactgtatgagtatgaatacaatctgtttggacagaacgttacagtgtgtatg
acatcggtatcaggtcatcttcttggtatggagttcaaagcgccattccagaaatggcac
agctgtaatcctgtgcagctgtttgatgctgaggtggagaagtactgtcctgagaactct
gttcagatcaagcgtaccttagaggctgaagtgagaaagtgtcaggcgttggtcatctgg
acagactgtgacagagaaggagagaacatcggctttgaggtcatcgacgtctgcagagca
gtgaagccggtgttgcaggtgttccgtgcacggttctccgagatcactcccaattccatc
cgacgggcgtgtgacacattaacagaaccggacatcaacgtcagcgacgccgtggacgta
cgccaagaactggacctcaggataggtgcgtccttcaccaggttccagacactccgccta
cagaagatcttcccagcatcgttggccaatcagctgatctcttacggcagctgtcagttc
cctactctgggctttgtggttgaacgcttcaagtctatccaggccttcataccagaaacc
ttctacaagatcaaagttctccatgaggtagatgaggagtgtgtagagttcagctggaag
aggaaccgacttttcaaccacaccgcctgtctggtactctaccagatctgtatggaggat
cccatagcaactgtaatctcagtatccagtaaacccaaaagcaagtggagaccacttccc
ctggacactgtggaaatggagaagctggcttccaggaagttgaagatcagtgccaaggag
accatgaagattgctgagaaactttatacgcaggggctgatcagctaccctcgtactgag
accaaccagtttcctaaggacctggctctgggtcctctggtggagcaccagatcccaagt
ccccagtggggaggctttgccaggggggtgttggagcagccgggggggccaaaccctcga
caggggaccaagactgaccaggcccatccccccatacaccccaccaagtacacagacgca
ctgcagggcaacgagcaacgcctttatgagttcatcgtgcgccatttcctggcatgtgta
tcccaggatgccatggggcaggagaccgtggtggatctggacatagctgacgagaggttc
tccgctaacggactcatgatcatcaagaggaactatctggatgtctacccctatgaccgc
tggagcgctaaggtgattccggtttatgaagtgggcagccagtttcaaccgtccgcaatc
gagatggtcgatggtcagacctcccctcctcaactcctcaccgaggcagacctcatttca
ctcatggagaaacatggcattggaacggatgcaacccacgcggaccacatcgagaccata
aagagtcgcatgtatgtggggctgaccgctgaccagaggttcctgccaggggaactgggc
atgggcttagtagagggttataactccatggggtatgagatgtctaaaccagacctgagg
gcggagctggaggcggacctgaagctggtgtcggaggggaggaaggacaaacagggcgtg
ttgcttcaccacatcaacaaatacaaggccgtcttcatagaatctgtcaagaaggccaag
aggttggacgaggctctgtcggcctatctgggcgcggcccaggagttcacggagtcagag
cagcaggatttggagattcctctccctgtcaggaagtgtcctcagtgtgggcgggacatg
gtgctgcgaagaagaaaggaggggaatgggaagtacctgacctgcgttggttacccagaa
tgcaagtgttctgtctggtttcctgacaccgtactagaggtcagcagagatgagtctgtc
tgttccacctgtcagccgagccctgtacacatgttaaagttcaagttccgccggggcagc
cttccccccacgatgcctctggagtttttgggctgcatcggggggtgtgacgagacactg
agggaagtgctcaacctgaaataccttcgaatggcaggaggagggccggcggggggacga
gcgagacgagacccccctcctgcccagagatctcgcccagcagcccccagaccagacccc
ctgccctctcaaacccccaacccttcctcctcctggcctggccgcccgcgggctgacgcc
caggcccctccccccgcacccagcgccggtgacatcacagtgtgtaactgcgggtcggag
gcgctgctcctcaccgtgcgtaaagacggacccaaccaaggacgccagttctacaagtgt
tcctcagggggctgtaacttcttcctgtgggccgaccagcccgacactccacctccagac
cgccagggggcgccacctgccagaccacagcagcccccgaggatttcggcggggtttggg
aacgtgggggtcggtggaggggccccgggggacgtggtgtgcaactgcagcgagccggcc
gtgcagcggacagtgcagaaggaggggcctaataaaggacggctgttccatacctgcggg
aggcccagagaacagcagtgcgggtttttcctctgggccgatgagaacgtaccaccacca
ggtcccggagggtatcgtggaggggggcgggggggttatgatgaagggggccaggggggt
tatggaggaggggagcgggggggttatggtgggggagacgcggggaagagggggaggaaa
actggcggtggaggagccccgaccgccacggccaagaaaccccgtacctgtggcatctgt
cacgcgccgggacatactcgcgccacctgccctcagcgctga

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