Escherichia marmotae: C1192_21150
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Entry
C1192_21150 CDS
T05353
Symbol
xerD
Name
(GenBank) site-specific tyrosine recombinase XerD
KO
K04763
integrase/recombinase XerD
Organism
ema
Escherichia marmotae
Brite
KEGG Orthology (KO) [BR:
ema00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ema03036
]
C1192_21150 (xerD)
Chromosome and associated proteins [BR:
ema03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
C1192_21150 (xerD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Phage_integrase
Phage_int_SAM_1
Phage_int_SAM_4
DUF2064
HTH_52
Motif
Other DBs
NCBI-ProteinID:
AUT29336
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All DBs
Position
4132076..4132972
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AA seq
298 aa
AA seq
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MKQDLARIEQFLDALWLEKNLAENTLNAYRRDLSMMVEWLHHRGLTLATAQSGDLQALLA
ERLEGGYKATSSARLLSAVRRLFQYLYREKFREDDPSAHLASPKLPQRLPKDLSEAQVER
LLQAPLVDQPLELRDKAMLEVLYATGLRVSELVGLTMSDISLRQGVVRVIGKGNKERLVP
LGEEAVYWLETYLEHGRPWLLNGVSIDVLFPSQRAQQMTRQTFWHRIKHYAVLAGIDSEK
LSPHVLRHAFATHLLNHGADLRVVQMLLGHSDLSTTQIYTHVATERLRQLHQQHHPRA
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
gtgaaacaagatttggcacgcatcgagcaatttcttgatgccctgtggctggaaaaaaat
ctggcagaaaatacgttgaacgcatatcgccgcgatctgtcaatgatggtggagtggttg
catcatcgtgggctaacgctggcaacggcgcaaagcggtgacttacaggcattattggca
gaacggctggagggtgggtataaagccaccagttcagcccgtttattgagtgcggtgcgc
cgattgttccagtatctttaccgcgaaaagtttcgtgaagacgatcccagtgcgcatctt
gcttcaccgaaattaccccagcgcttaccgaaagatttaagtgaagcgcaggtcgaaagg
ttattgcaggcaccgctggtggatcagccactggaactgcgtgacaaagcgatgctcgaa
gtgttgtatgctaccgggttgcgcgtttctgaacttgtcggtctgacgatgagtgatatc
agcttgcgtcagggggtggtgcgggtaataggtaaaggcaacaaagagcgactggtgccg
ttaggtgaagaggcggtctactggctggaaacctatctggaacatgggcgaccgtggttg
ttaaacggtgtgtcgattgacgtactgtttcccagccagcgcgcgcagcaaatgacgcgg
cagactttctggcatcgcattaaacactatgctgtgctggcggggatcgacagcgaaaag
ttatcgccgcacgtgttgcgtcacgcctttgccacccatttgttaaatcatggtgcggat
ttacgtgtggtgcagatgttgctgggtcacagtgatctctccacgactcaaatttatacg
catgtcgccactgagcgtctgcggcaacttcatcaacagcatcacccgcgggcgtga
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