Elizabethkingia anophelis FMS-007: M876_15195
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Entry
M876_15195 CDS
T03946
Name
(GenBank) recombination protein RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
emn
Elizabethkingia anophelis FMS-007
Pathway
emn03410
Base excision repair
emn03430
Mismatch repair
emn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
emn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
M876_15195
03430 Mismatch repair
M876_15195
03440 Homologous recombination
M876_15195
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
emn03400
]
M876_15195
DNA repair and recombination proteins [BR:
emn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
M876_15195
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
M876_15195
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
M876_15195
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
DSPc
SIS_2
Myotub-related
Motif
Other DBs
NCBI-ProteinID:
AKH95900
LinkDB
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Position
3253626..3255332
Genome browser
AA seq
568 aa
AA seq
DB search
MQRWIYKPTPSEDVIDSISSSLGFGYLASKILVMRGIDSYQKAREFFKPKASDIHNPFLM
ADMQKAVERIATAIENGEKILVFGDYDVDGTTAVALMYLYLSKICDKKYLDFYIPDRNLE
GYGVSTEGIDYAKENDFSLIIALDCGIKSADKVDYANSLGIDFIICDHHLPGDEIPKAAA
VLDPKRKDCEYPYKDLSGCGVGYKLCQALNTIYKISDHELQDLTDLLAISIAADIVPITG
ENRVFAKMGLNKLRKTKRQGLKILIPYEKLQNFTISNIVFEIAPKINAAGRISHGKAAVE
LMIAENAKQAHLIADQIVNLNDERKELDSNMTQQAIDQVIETKQEETFSTIVYQSGWNKG
VIGIVASRLIELYYKPTLVFTDGTNGEMVASARSVADFDLHHALDACSDLFLKFGGHRAA
AGLSMEKKHFEAFKTKFEDTVRNSIKEHQKTPSIEIDAEISLNDLTNDFFQFHRWLAPFG
PENMKPVLVIKNARVSGHVRKIGKQSSHLKFNIIQDSSRRGIECLAFKMGEHASDFRTKT
FDIAFTIEENHWKDNLTYYLNVRDVIFH
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atgcaacgatggatctacaaaccgacaccttccgaagacgtaatagatagtatcagctct
tcgctgggctttggttatttagcatccaaaattctggttatgcgtggaatagattcctac
cagaaagccagagaattctttaagcccaaagcttctgatatccataatccttttctgatg
gcagatatgcaaaaggctgtagagagaattgctacagctatcgaaaatggagaaaaaata
ctagtttttggggattatgatgtagacggaacaacagctgttgcactaatgtacctttac
cttagcaaaatctgtgacaagaaatatttagatttttatattcctgacagaaatctggaa
ggctatggtgtttccaccgaaggcattgactacgcaaaggaaaatgacttttcattaatc
atcgcattagactgtggaataaagtctgccgacaaagttgactatgctaatagtttagga
atagactttattatctgtgatcatcaccttcccggtgacgagattccgaaagcagctgct
gtccttgaccctaaacgaaaagattgtgaatacccttataaagatcttagtggatgtggc
gttggttataaactatgccaggcactgaatacaatttacaaaatttcggatcacgaatta
caggatcttactgatcttttggcgataagtattgccgcagatattgtccctataacaggt
gaaaacagagtttttgccaaaatgggactcaataaattacgtaaaacaaaaagacaggga
ttaaagattttaattccttatgaaaagcttcaaaattttacaatttcaaatattgttttt
gaaattgctcctaaaataaatgctgccggcagaatttctcacggaaaggctgctgtggaa
ctaatgattgcagaaaatgcaaaacaggcgcacctcatcgctgatcagattgttaatcta
aacgatgaaagaaaagagctggacagtaatatgactcagcaggcaatagatcaggttatc
gaaacaaaacaggaagaaacattcagtacaattgtttaccaatccggatggaataagggt
gtaatcggtattgtagcctccagactaattgaattatattataaaccgactctggtattt
acagatggtacaaatggtgaaatggtagcttcagcacgatctgttgcagattttgacctt
catcatgcattagatgcttgttcagatttatttttaaaatttggaggacaccgcgcagct
gcaggactatccatggagaaaaagcattttgaagcatttaagacaaaattcgaagatacc
gtacgaaactctataaaagaacatcagaaaaccccaagtattgagattgatgctgaaatt
tctctgaatgacttaactaatgattttttccagtttcatagatggttggctccttttgga
cctgaaaatatgaaaccagtactggttattaaaaatgcaagagttagcgggcatgtaagg
aaaattggaaaacaaagttcccatctgaagtttaatatcatacaggattcttccagaaga
gggattgaatgtctggcatttaaaatgggggaacatgccagtgatttcagaaccaaaact
tttgatattgcttttaccattgaagaaaaccactggaaagataatcttacttactatctg
aatgtaagagatgtgatttttcattaa
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