Escherichia coli O103 H2 12009 (EHEC): ECO103_4014
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Entry
ECO103_4014 CDS
T01096
Symbol
yrdC
Name
(GenBank) predicted ribosome maturation factor
KO
K07566
L-threonylcarbamoyladenylate synthase [EC:
2.7.7.87
]
Organism
eoh
Escherichia coli O103:H2 12009 (EHEC)
Brite
KEGG Orthology (KO) [BR:
eoh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
eoh03009
]
ECO103_4014 (yrdC)
03016 Transfer RNA biogenesis [BR:
eoh03016
]
ECO103_4014 (yrdC)
Enzymes [BR:
eoh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.87 L-threonylcarbamoyladenylate synthase
ECO103_4014 (yrdC)
Ribosome biogenesis [BR:
eoh03009
]
Prokaryotic type
Other maturation factors
ECO103_4014 (yrdC)
Transfer RNA biogenesis [BR:
eoh03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
ECO103_4014 (yrdC)
Prokaryotic type
ECO103_4014 (yrdC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sua5_yciO_yrdC
Motif
Other DBs
NCBI-ProteinID:
BAI32724
LinkDB
All DBs
Position
complement(4107615..4108187)
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AA seq
190 aa
AA seq
DB search
MNNNLQGDAIAAAIDVLNEERVIAYPTEAVFGVGCDPDSETAVMRLLELKQRPVDKGLIL
IAANYEQLKPYIDDTMLTDAQRETIFSRWPGPVTFVFPAPATTPRWLTGRFDSLAVRVTD
HPLVVALCQAYGKPLVSTSANLSGLPPCRTVDEVRAQFGAAFPVVPGETGGRLNPSEIRD
ALTGELFRQG
NT seq
573 nt
NT seq
+upstream
nt +downstream
nt
gtgaataataacctgcaaggagacgctatcgcagctgcgatagatgtcctcaatgaagaa
cgtgtcatcgcctatccaacggaagccgttttcggtgtcgggtgcgatcctgatagcgaa
acagcagtgatgcgactgttggagttaaaacagcgtccggttgataaggggctgatttta
atcgcggcaaattacgagcagcttaaaccctatattgatgacaccatgctgactgatgcg
cagcgtgaaaccattttttcccgctggccaggtcctgtcacctttgtctttcccgcgcct
gcgacaacaccgcgctggttgacgggccgctttgattcgcttgctgtacgagtcaccgac
catccgttggtggttgctttgtgccaggcttatggtaaaccgctggtttctaccagtgcc
aacttgagtggattgccaccttgtcgaacagtagacgaagttcgcgcacaatttggcgcg
gcgttcccggttgtgcctggtgaaacgggggggcgtttaaatccttcagaaatccgcgat
gccctgacgggtgaactgtttcgacaggggtaa
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