Escherichia coli O103 H2 12009 (EHEC): ECO103_5066
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Entry
ECO103_5066 CDS
T01096
Name
(GenBank) predicted helicase
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
eoh
Escherichia coli O103:H2 12009 (EHEC)
Brite
KEGG Orthology (KO) [BR:
eoh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
eoh03021
]
ECO103_5066
Transcription machinery [BR:
eoh03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
ECO103_5066
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
DEAD
ResIII
Helicase_C
Motif
Other DBs
NCBI-ProteinID:
BAI33745
LinkDB
All DBs
Position
5262374..5265541
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AA seq
1055 aa
AA seq
DB search
MDGYMPLEVGDLVDSPYGIGKLIRINNNDALIKYFDSPVNYEGIEQTVEVKHLKKAELHA
ESLVYRYDYEVAHWQIARVVGAVPGGVRLHFPNKQQEDVSLNDIFVRWDRPISDAAALLA
ERITYTPFWQDARLAYQHQMLKQRNACAGITSSLSSSIELEPYQLAVARRVLSDPIQRYL
LADEVGLGKTIEAGLIVRQHVTENPLAHCVVIVAPGVLHRQWQQELSARFHLEELLNKSI
HIIDMAAFSTADPLSFRPDMLVIDEAHQVGAWAWDAEYEQRYASVNYLAQQSEKLLLLSA
TPVTGNEKNFLAMLHLLDAKNYPLTDTGLQKFQQRIQQREEIGSLFYAFNCDNDNMTLEE
NLEALTRMFPEDEVLNGMASQLLPHLDMMQPLRSEARDLLINKIRHYIGNRYRLHHRLLR
NRRSNPAISVLMPGLSGLSLKKYATTNASNDMMIAWRESAIMMHPQDPTLAAIYQLLFEA
AIATPELLARLANYRLQQESLGAAQGFLYSDSQLALLQHPLFDGEKEILLELIDRCKMEC
DSKRQRLIDVLEKLLDSNVRELPYIVVFCDQPWVADQVFTDLMIPFIGKIQRHNPDKEVR
FGKGSKCQILVCDRRAEEGVNLHGGRKIALHYDLLLSPNRMEQRLGRLNRYCATESATTI
LSMALVSEAEGLQNQWLTILNEVFDVFEESIASLQYLIDEELQRLISNLYPLGEESMMQL
SARLAGEDGRLTVEKQRIEMQEVLLQIDGDIIEAREYADALAEIDENEEEFRRCARNLIG
NVLKFDFIPDEKDPSIFRYRFNPGDRGTGTLVSPQRLQKHCLLGFDLNQSSGSSPMTWPL
SYYRADTSQGKIRPARLGEPFHDAILQMLDFEERGVASAIIRITPGMGDENIFFRYDFLI
EADVHTPALQRLADHLMPPETITLWLDQAGQQVTNAEVLMILNEDYKPKDKGGRHLNLNE
ERWAQISHCISAKDWRTWCNDSYSIAQRLAVEQFATQQALSLSRLEHYLSSAALHHANRQ
ETGQMLRQGIAQPKMTCLATRALIIASEAILDEDS
NT seq
3168 nt
NT seq
+upstream
nt +downstream
nt
atggatggatatatgccccttgaagttggcgacctcgttgactcgccttatggaatcggc
aaacttattcgcattaacaataatgatgctctaattaagtatttcgattctcccgtaaat
tatgaaggcatagagcaaactgtcgaagtaaaacacctaaaaaaagccgaactccacgcg
gaaagtctggtttatcgctacgactacgaggttgcacactggcagattgcacgtgttgtt
ggtgccgtgcctggaggggtacgtttgcattttcctaacaagcagcaggaagacgtcagc
ttaaatgatatctttgtgcgctgggatcgccctatcagcgatgctgcggcccttctggcc
gagcgcatcacctatacccccttctggcaagatgcccgtctagcttatcagcatcagatg
ctgaaacaacgcaacgcttgtgctgggattacctcttcgctgtcgtccagtattgaactc
gaaccttaccagttggccgtcgcgcgtcgggtgttatctgaccctattcaacgctatctg
ttggctgatgaagtcggcctcgggaaaaccatcgaagctgggctgatcgtgcgtcaacac
gtcacggaaaatccgctcgcccactgcgtggtgattgtggcgcctggagttctgcaccgg
cagtggcagcaggaactttctgcacgttttcacctggaggaactgcttaataagtcgatc
catatcattgatatggccgccttcagcacagcggaccccctgtcgttccgccccgatatg
ctggtgattgacgaagctcatcaggtcggtgcctgggcatgggatgcagagtacgagcag
cgctacgctagtgtgaactacttggcgcaacaaagtgaaaaattgctattactatcagcg
acacccgtaactggcaatgaaaagaacttcctggccatgctgcatctgctggatgctaaa
aattacccactgactgacactggcttacagaaatttcagcagcgtatccagcagcgcgaa
gaaataggttcactgttctacgcgtttaactgtgataacgacaacatgacgctggaagag
aacctggaagcgttgactaggatgtttcctgaggatgaagtactaaacgggatggcttca
cagttgcttccccatttagatatgatgcaaccgctgcggagtgaggcgcgtgatctgctg
atcaataaaatccgccactacattggtaaccgttaccgtctgcaccaccgcctgctacgc
aaccgccgtagcaaccccgccattagtgtcctgatgcctggcttgtccggcctatcacta
aaaaaatatgccacgacgaacgccagcaacgacatgatgatcgcctggcgcgaatcggca
ataatgatgcacccacaagaccccacgttggcggcaatttatcagttactgtttgaagcc
gctatcgctacgccggaactactggcccggcttgcaaactatcgcttacagcaggagtca
cttggtgccgcgcagggctttctctatagtgattcacagctcgcgctgttgcagcatccg
ctgtttgatggcgagaaggagatcctgcttgagctgatagaccgctgcaaaatggagtgt
gacagcaagcgccagcgcttaattgatgtattggaaaaacttctggatagtaacgtcaga
gaactcccttatattgtggtgttctgtgaccagccatgggtagccgaccaggtatttacc
gacctgatgataccatttattggcaaaatccagcggcataaccccgacaaagaagtgcgc
tttggcaagggaagcaaatgccagatcttagtgtgcgatcgccgggctgaagaaggtgtc
aatctgcacggcgggcgcaagattgcgctgcattacgacttgttgctgtcgcctaaccgt
atggaacagcgtcttggccgcttgaatcgctattgcgcgactgagagtgcgactactatc
ctcagcatggcgctggtgagtgaagcagagggtctgcaaaatcagtggctgactattctc
aatgaagtgttcgatgtcttcgaagagtcgattgcaagcctacaatacttgattgatgag
gaattacagcggcttatttccaatctttacccgctgggtgaagagagcatgatgcaactc
agtgcgcgtctggctggtgaggatggccgccttacggtggaaaagcagcgcatcgaaatg
caggaagtcctgctgcaaattgatggcgatatcatcgaagccagagagtatgccgatgca
ctggcggaaatagatgagaatgaagaggaattccgccgctgcgctcgtaatctgataggt
aatgtactgaaattcgattttattccagatgagaaagatccatcgatattccgctatcgc
ttcaaccctggtgatagagggacgggcaccttagtcagcccacagcgcctacaaaaacac
tgcctgctgggctttgatctcaaccaatctagcggaagttcgcccatgacttggccactt
agctactaccgggctgatacctctcagggtaaaatccgcccggctcgcttgggtgaacct
ttccatgatgccatcctacaaatgctggattttgaagaacgcggtgttgctagcgcgatt
atccgtatcacaccaggcatgggcgatgaaaatatttttttccgctacgattttctgatt
gaagctgatgtccatacaccagcactgcaacgactggcggaccatctgatgcctcctgaa
accattaccttgtggctggaccaggccggccagcaggtcaccaacgcagaggtgttgatg
atacttaatgaagactataaaccgaaggataagggcggacgccacctaaatctcaatgag
gaacgctgggcgcagatctcccattgcatcagcgctaaagattggcgcacctggtgtaac
gatagctatagcatagcccagcgcctggcggtggaacagttcgccacacaacaggctctc
agcctgagccgactggaacattatctaagcagcgccgcgctgcatcatgctaaccggcag
gagacagggcagatgctgcgccagggtattgcacagccgaaaatgacctgcctggcgacg
cgtgccttaatcattgcatcagaagctatattggatgaggactcataa
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integrated database retrieval system
