Escherichia coli O26 H11 11368 (EHEC): ECO26_0775
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Entry
ECO26_0775 CDS
T01098
Symbol
nei
Name
(GenBank) endonuclease VIII/5-formyluracil/5-hydroxymethyluracil DNA glycosylase
KO
K05522
endonuclease VIII [EC:3.2.2.-
4.2.99.18
]
Organism
eoj
Escherichia coli O26:H11 11368 (EHEC)
Pathway
eoj03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
eoj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
ECO26_0775 (nei)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
eoj03400
]
ECO26_0775 (nei)
Enzymes [BR:
eoj01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
ECO26_0775 (nei)
DNA repair and recombination proteins [BR:
eoj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
ECO26_0775 (nei)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Motif
Other DBs
NCBI-ProteinID:
BAI24100
LinkDB
All DBs
Position
829087..829878
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AA seq
263 aa
AA seq
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MPEGPEIRRAADNLEAAIKGKPLTDVWFAFPQLKTYQSQLIGQHVTHVETRGKALLTHFS
NELTLYSHNQLYGVWRVVDTGEEPQTTRVLRVKLQTADKTILLYSASDIEMLTPEQLTTH
PFLQRVGPDVLDPNLTPEVVKERVLSPRFRNRQFAGLLLEQAFLAGLGNYLRVEILWQVG
LTGNHKAKDLNAAQLDALAHALLEIPRFSYATRGQVDENKHHGALFRFKVFHRDGEPCER
CGSIIEKTTLSSRPFYWCPGCQH
NT seq
792 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaaggcccggagatccgccgtgcagcggataacctggaggcggcgatcaaaggc
aaaccactaactgatgtctggtttgccttcccgcagttaaaaacttatcaatcacaactt
atcggtcaacacgttacccatgtggaaacgcgtggtaaggcgttgttaactcatttttcc
aacgaattaacgctctacagccataatcagctttacggcgtctggcgcgtggttgatacc
ggcgaagagccgcagaccacgcgagtattgcgggtaaaactgcaaacggctgacaaaacc
attctgctttatagcgcctcggatattgagatgttgaccccggaacaactgaccacgcat
ccgtttttacaacgcgttggtcccgatgtgctggatccgaatctgacgccggaggtggtg
aaagaacgggtattgtcgccgcgctttcgtaaccgtcagtttgcaggattactgctcgag
caggcgtttctggcaggacttggcaattatttgcgggtggagatcctctggcaggttggg
ttgactggaaatcataaagcgaaagatctcaatgcggcgcaactggatgcactcgcacac
gcgttactggagattcctcgattttcttacgctacgcgggggcaggtggatgagaataag
catcatggggcgctgtttcgctttaaggtttttcatcgagatggcgaaccgtgcgaacgt
tgtggcagcatcattgagaaaaccacgctgtcatctcgcccgttttactggtgccctggc
tgccagcactaa
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