Escherichia coli O26 H11 11368 (EHEC): ECO26_4978
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Entry
ECO26_4978 CDS
T01098
Symbol
rfaD
Name
(GenBank) ADP-L-glycero-D-mannoheptose-6-epimerase, NAD(P)-binding RfaD
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
eoj
Escherichia coli O26:H11 11368 (EHEC)
Pathway
eoj00540
Lipopolysaccharide biosynthesis
eoj01100
Metabolic pathways
eoj01250
Biosynthesis of nucleotide sugars
Module
eoj_M00064
ADP-L-glycero-D-manno-heptose biosynthesis
Brite
KEGG Orthology (KO) [BR:
eoj00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
ECO26_4978 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
eoj01005
]
ECO26_4978 (rfaD)
Enzymes [BR:
eoj01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
ECO26_4978 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
eoj01005
]
Core region
ECO26_4978 (rfaD)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
RmlD_sub_bind
NAD_binding_4
Polysacc_synt_2
KR
adh_short
Motif
Other DBs
NCBI-ProteinID:
BAI28134
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Position
complement(5005686..5006618)
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AA seq
310 aa
AA seq
DB search
MIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLVDLNIADYMDKEDFLIQI
MAGEEFGDVEAIFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLEREIPFLYASSAATY
GGRTSDFIESREYEKPLNVYGYSKFLFDEYVRQILPEANSQIVGFRYFNVYGPREGHKGS
MASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVADVNLWFLENGVSGIFNLGTGRA
ESFQAVADATLAYHKKGQIEYIPFPDKLKGRYQAFTQADLTNLRAAGYDKPFKTVAEGVT
EYMAWLNRDA
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgatcatcgttaccggcggcgcgggctttatcggcagcaacatcgttaaagccctgaat
gataaaggcatcaccgatattctggtggtggacaacctgaaagacggcaccaagtttgtg
aacctggtggatctgaatatcgcagactatatggataaggaagacttcctgatccagatt
atggctggcgaagagttcggcgatgtcgaagcgattttccacgaaggcgcgtgctcttcc
accaccgagtgggacggcaagtatatgatggataacaactatcaatactccaaggagctg
ctgcactactgcctggagcgtgaaatcccgttcctgtacgcttcttccgcagccacctac
ggcggacgcacctccgactttattgaatcccgcgagtacgaaaaaccgttgaacgtctac
ggttactcaaaattcctgtttgatgaatatgttcgccaaatcctgccggaagcgaactcg
cagattgttggcttccgctatttcaacgtttatggaccgcgtgaaggccataaaggcagc
atggcgagcgtcgctttccatctcaacacccagcttaataacggtgaatcaccgaagctg
ttcgaaggtagcgagaactttaaacgcgacttcgtctatgttggcgatgtggcagatgta
aacctgtggttcctggaaaatggcgtttccggcatcttcaacctcggcaccggtcgtgcg
gaatccttccaggctgtagctgatgctacgctggcttatcacaagaaaggccagatcgaa
tacattccgttcccggataagctgaaaggccgctaccaggcgttcactcaggcagatctg
acaaatctgcgcgcggcgggttacgacaaaccgttcaaaaccgttgctgaaggtgtaacg
gaatacatggcctggctgaatcgcgacgcataa
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