Erwinia pyrifoliae DSM 12163: EPYR_02890
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Entry
EPYR_02890 CDS
T02121
Symbol
sbcC
Name
(GenBank) Nuclease sbcCD subunit C
KO
K03546
DNA repair protein SbcC/Rad50
Organism
epr
Erwinia pyrifoliae DSM 12163
Brite
KEGG Orthology (KO) [BR:
epr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
epr03400
]
EPYR_02890 (sbcC)
DNA repair and recombination proteins [BR:
epr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
EPYR_02890 (sbcC)
Archaeal homologous recombinant proteins
EPYR_02890 (sbcC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcC_Walker_B
SMC_N
AAA_29
ABC_tran
AAA_21
NTPase_1
nSTAND3
cobW
AAA_22
VirJ
Motif
Other DBs
NCBI-ProteinID:
CAY75270
LinkDB
All DBs
Position
2941915..2945274
Genome browser
AA seq
1119 aa
AA seq
DB search
MKILTLRFKNLNSLKGEWKIDFTAEPFASNGLFAITGPTGAGKTTLLDAICLALYHKTPR
LGGITSTQNDLMTRDSAECLAEVEFEVKGVAWRAFWSQNRARAAADGNLQAPRVELARCK
DNHIVADKAKEKQDMITSLTGLDFERFTKSMMLSQGQFAAFLNAKASERAELLEELTGTE
IYGRLSSAVFERHKEAKAALDGLRAQAAAMDLLDAEQQQTLADQQTQLISDEQVLTSQQH
SQQQALQQLQQLERLQQEQQQLSRQRQQLDEQIEQAKRQLGAADLEQQQALKNHEDHQLH
RQQQETLIAEQVIPLDHQLATLQEQSEQLARERSEHQQLLTARLTESAKNQQIQQDKQAQ
QQRLNQWHEAHPHFSHYGEYLPLWRERFSQQQQSEQSLSALSQRLKVQQQTLQQQELAHR
QLIQQAVPLQQQLDAAQHSLNQAQQALAPLQQQHPQESLRNALEQFSRLRPQRQLLATLL
PQWRQLGERRSRLKREQQALAQQIQQSSEQLQTLRSRWAEKRQHEQDLDKRCRLEQRIAD
LEQQRALLEPGQPCPLCGSENHPAIAAYQALELSENQRRLNGLKEDVRVLGEQSSACGAQ
LKQQQEQQQRQQQDDADLARQATELEQQWHSAASALALEFTADQHQQAHDWLAQQEQQES
ELQQQLNRLEQAMRHCQQQQEARYQQQQAWQQLEQQTALCQQEMTTSRHHLSEQQQQLEQ
DRQRARQLRSELAASLAPLELKLPEDGDYPGWLQIREQQWRQWQQNASELATLAPELAAL
GSRQQALEEERVQQQARINALDARSQQQQQLLSERRQQRQQLFGDATVNSLRQQLNDESE
KHLQTLRQYQQQRQVQQDRINTLTGQHKSLNEQLTGLQSRLNEAAKHVDQPENLTAQQQT
LQVSLEALSLQLRELASQQGQLRQQLEYDATRRLQQQALLAEVAANERQMEDWSYLNDLI
GSQNGSKFRRFAQGLTLDHLVSLANTQLSRLHDRYQLQRKPQEALELEVIDTWQAETRRD
TRTLSGGESFLVSLALALALSDLVSHKTRIESLFLDEGFGTLDAETLDSALDALDALNAS
GKTIGVISHVEAMKERIPVQIRVRKVNGLGYSRLDLPGG
NT seq
3360 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattctcaccctgcgttttaaaaacctcaactcgctgaagggcgagtggaaaatc
gattttacggcagaaccctttgccagcaacggcctgttcgccattaccgggccaacgggt
gcggggaaaaccaccctgcttgatgccatctgtcttgcgctttatcacaagaccccgcgc
ctggggggaattaccagtacacagaacgacctgatgacgcgcgatagcgcagaatgcctc
gccgaggtggaattcgaggtgaaaggcgttgcctggcgcgccttctggagtcagaaccgt
gcgcgcgctgccgccgatggcaatctgcaggcaccgcgcgtcgaactggcgcgctgcaag
gataaccatatcgtcgccgataaggcgaaagagaagcaggatatgatcaccagcctgacc
gggctggatttcgagcgctttaccaagtcaatgatgctgtcccagggacagtttgccgcc
tttcttaatgccaaagcgagcgaacgcgccgagctgctggaagagctgaccggcaccgaa
atttatggccgcctgtcatcagcggtatttgagcgccataaagaggcaaaggcggcgctg
gacgggctgcgcgcgcaggcagcggcgatggatctgctggatgcggagcagcagcaaacc
ctggctgaccagcagacacagctgataagcgatgagcaggtactcacttcacaacagcac
agccagcagcaggcgttacagcagctgcaacagctggaaaggttacagcaggagcagcag
cagctttcccgccagcgccagcagctcgatgaacagatagagcaggcaaagcggcagctt
ggcgcggcagaccttgagcaacagcaggcgctgaagaaccatgaggatcatcagctgcat
cgccagcagcaggaaacgctgatcgccgaacaggtcatccctctggatcaccagctcgcc
acgctgcaagaacagtctgagcagctggcccgcgagcgaagtgagcaccaacaattgctg
acagcgcgcctgacggagagcgctaaaaaccagcagatccagcaggataagcaggcgcag
cagcagcggctgaaccagtggcacgaagcgcatccccatttttctcactacggtgagtat
ttacccctgtggcgtgaacgtttcagccagcagcagcaaagtgagcagtcactttcagcg
ctaagccagcggctaaaggttcaacagcaaacgctgcagcagcaggagctggctcaccgg
cagcttatccagcaggcggtgccactgcagcagcagcttgatgcggcgcagcacagcctg
aaccaggcgcagcaggcgctggccccgttacaacagcagcacccgcaggaaagtctgcgc
aacgcgctggagcagtttagccgtctgcgcccgcaacgccagctgctggctacgctgctg
ccgcagtggcggcagctcggtgaacgccgcagtcggctaaagcgggagcagcaggcgtta
gcgcaacagatacaacaaagtagtgagcagttacaaaccctgcgcagccgctgggcagag
aaacgccagcatgagcaggacctggacaaacgctgccggctggagcagcgcattgctgac
ctggaacagcagcgcgccctgctggaaccgggccagccctgcccgctgtgcgggtcagaa
aaccatccggcgattgccgcatatcaggcgctggagctatcggaaaatcagcgacggctc
aacggcctgaaagaagacgtccgggtgctcggcgaacagagcagcgcctgtggcgcacag
ttaaagcagcagcaggaacagcagcagcgccagcagcaggatgacgccgaccttgcccgt
caggcaacggagctggaacagcagtggcacagcgccgcctccgcgctggcgctggaattc
accgccgatcaacatcagcaggcccacgactggctggcgcagcaggagcagcaggaaagc
gaacttcagcagcagctgaaccggctggagcaggcgatgcgccactgccagcagcagcag
gaggcgcggtatcagcagcagcaggcctggcaacagcttgaacagcaaaccgccctgtgc
cagcaggagatgacgacgtcacgccaccatttaagtgaacagcagcagcagctggagcag
gacaggcagcgcgcacgccagctgcgcagtgaactggccgcaagcctcgcgccgctggag
cttaagctgccggaggacggcgattatccaggctggttacagatccgtgagcagcagtgg
cggcagtggcagcagaacgccagcgagctggccacgctggcaccggaactggcggcgctc
ggcagccgtcagcaggcgctggaagaggaacgggtgcagcagcaggcacgtattaacgcg
ctggatgcccgcagccagcaacagcagcaattgctgagcgaacgccggcagcagcgccag
cagctgtttggcgatgccacggtaaactcgctacgccagcagctcaacgacgagtcggaa
aagcatctgcaaaccctgcgccagtatcaacaacagcggcaagtgcagcaggatcggata
aataccctgaccgggcagcataaatcattaaatgaacagttgactggtctacagtcgcgg
cttaatgaagctgcaaaacacgttgatcaaccggaaaacctgactgcgcagcagcagacc
ctacaggtcagcctggaggcgctcagtctgcaattgcgcgaactggccagccagcagggg
cagctgcgccagcagctcgaatacgatgcaacacgccgcttacagcagcaggcgctgctg
gcggaggtggccgccaatgaacggcagatggaagactggagctatctcaatgatttgatt
ggctcccaaaacggcagtaagttccgccgctttgcccagggattaaccctcgatcatctg
gtatcactggcaaatacccagctaagccgcctgcacgatcgctatcagctccagcgcaaa
ccacaagaggcgctggaattagaggtgatcgacacctggcaggccgaaacccggcgcgat
acgcgcacgctgtccggcggcgagagcttccttgtcagcctggcgctggcactggcgctt
tccgatttggtcagccataaaacccgcattgaatcgctgttccttgatgaaggcttcggc
acgctggatgctgaaacccttgacagcgcgctggatgcgctggatgcgcttaacgccagc
ggcaaaaccattggggtaatcagccacgtcgaggcaatgaaagagcgcattccggtgcag
atcagggtaagaaaggttaacgggttgggttacagccggctggatttacccggcggttaa
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integrated database retrieval system
