Erwinia pyrifoliae DSM 12163: EPYR_03952
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Entry
EPYR_03952 CDS
T02121
Symbol
gyrB
Name
(GenBank) DNA gyrase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
epr
Erwinia pyrifoliae DSM 12163
Brite
KEGG Orthology (KO) [BR:
epr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
epr03032
]
EPYR_03952 (gyrB)
03400 DNA repair and recombination proteins [BR:
epr03400
]
EPYR_03952 (gyrB)
Enzymes [BR:
epr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
EPYR_03952 (gyrB)
DNA replication proteins [BR:
epr03032
]
Prokaryotic type
DNA Topoisomerases
EPYR_03952 (gyrB)
DNA repair and recombination proteins [BR:
epr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
EPYR_03952 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
GyrB_insert
DNA_gyraseB_C
Toprim
GyrB_hook
HATPase_c
HATPase_c_3
DUF6865
Motif
Other DBs
NCBI-ProteinID:
CAY76332
UniProt:
D2TAV5
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All DBs
Position
complement(3990770..3993181)
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AA seq
803 aa
AA seq
DB search
MMSNSYDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDNAIDEALAGHCSDI
LVTIHADNSVSVQDDGRGIPTGIHEEEGISAAEVIMTVLHAGGKFDDNSYKVSGGLHGVG
VSVVNALSEKLELTIRREGKVHQQVYVHGVPQAALNVTGETDLTGTRVRFWPSHQTFTNV
VEFEYEILAKRLRELSFLNSGVSIKLEDKRDGKNDHYHYEGGIKAFVEYLNKNKTPIHPN
VFYFSTEKDGIGVEVALQWNDGFQENIYCFTNNIPQRDGGTHLAGFRAAMTRTLNAYMDK
EGYSKKAKVSATGDDAREGLIAVVSVKVPDPKFSSQTKDKLVSSEVKSAVEQQMNELLSE
YLLEHPGDAKIVVGKIIDAARAREAARRAREMTRRKGALDLAGLPGKLADCQERDPALSE
IYLVEGDSAGGSAKQGRNRKNQAILPLKGKILNVEKARFDKMLASQEVATLITALGCGIG
RDEYNPDKLRYHSIIIMTDADVDGSHIRTLLLTFFYRQMPEIIERGHVYIAQPPLYKVKK
GKQEQYIKDDEAMDQYQIAIALDGATLHANASAPALGGKPLEDLVSEFNSTRKMIKRMER
RYPVALLNALIYHATLSDVTAEAPVQNWLDGLVKYLNDNDQHGSSYSGVVRENRELHLFE
PVLRVRTHGVDTDYPLDNEFVLGGEYRKICALGEQLRGLIEEDAYIERGERRQPIASFEQ
AIDWLGKESRRGLSVQRYKGLGEMNPEQLWETTMDPDSRRMLRVTIKDAVAADQLFTTLM
GDAVEPRRAFIEENALRAANIDI
NT seq
2412 nt
NT seq
+upstream
nt +downstream
nt
ttgatgtcgaattcttatgactcctccagtatcaaagttctcaaggggctggatgcggta
cgcaagcgcccgggtatgtatatcggcgatacggatgacggcaccggtctgcatcacatg
gtatttgaggtcgtggataacgccattgacgaagccctcgccggtcactgctccgatatt
cttgtgaccattcatgccgataactctgtttcggtacaggatgacggccgtggtatccct
accggtattcacgaagaagagggtatctctgccgctgaagtgatcatgaccgtgctgcat
gccggcggtaagtttgacgataactcctataaagtttccggcggcctgcacggcgtgggc
gtttccgtggttaacgccctgtcggaaaaactggaactgaccattcgtcgtgaaggtaaa
gtccaccagcaggtctacgttcacggcgtgccacaggccgcgctgaatgtcaccggtgaa
accgatctgaccggcacgcgggtgcgtttctggccaagccatcagacgtttaccaatgtt
gtcgaattcgaatacgagatcctggcaaaacgcctgcgtgagctgtcgttcctgaactcc
ggcgtctccatcaagctggaagataagcgtgacggcaaaaacgaccattaccactatgaa
ggcggtatcaaggcgttcgttgagtacctgaacaaaaacaaaaccccgatccaccccaac
gtgttctatttctccaccgaaaaagatggcatcggcgtggaagtggctctgcagtggaac
gacggtttccaggaaaatatctactgttttaccaacaatattccgcagcgcgacggcggt
acgcacctggcgggcttccgcgccgccatgacccgtaccctgaacgcctatatggataaa
gaaggctacagcaagaaagccaaagtgagcgccaccggtgacgatgcgcgtgaaggactg
attgcggtggtatcggtcaaagtgccggacccgaaattctcctcgcagacgaaagacaag
ctggtctcttctgaggtgaaatcggcggttgagcagcagatgaacgagctgctgtctgag
tacctgctggaacatccgggcgatgcgaagatcgtggttggaaaaatcattgatgccgct
cgtgcgcgtgaggcggcacgccgcgcacgcgaaatgacccgccgtaaaggcgcgctggac
ctggcagggctgccgggcaagctggccgactgccaggagcgcgacccggcgctgtctgaa
atctacctggtggagggtgactctgcgggcggttctgccaaacaggggcgtaaccgtaag
aatcaggccatcctgccgttgaaaggtaaaatcctcaacgtggagaaggcgcgcttcgac
aaaatgctggcttctcaggaagtggcgacactgatcaccgcactgggctgcggcattggt
cgcgacgagtacaatccggacaaactgcgctatcacagcattatcattatgaccgatgct
gacgtcgatggctcacatatccgtacgctgttgctgaccttcttctatcgccagatgccg
gaaatcatcgagcgcggccacgtatatatcgcgcagccgccgctgtacaaggtgaaaaaa
ggtaagcaggaacagtacattaaagacgatgaggcgatggatcagtaccaaattgccatc
gcgcttgacggtgccacgctgcacgccaatgccagtgctccggcgctgggcggcaagccg
ctggaggacctggtgtctgagttcaacagcacgcgcaagatgatcaaacgtatggagcgc
cgctatccggtggcgctgctgaatgcgctgatttaccatgccaccctgagtgatgtgacg
gcagaagcgccggtacagaactggctggacggtctggtgaagtatcttaacgataacgat
cagcatggcagcagctatagcggcgtggtgcgtgaaaaccgcgaattgcatctcttcgag
ccggtactgcgcgtgcgcacgcacggtgtggataccgattatccgctggataacgaattt
gtcctcggcggcgaataccgcaaaatctgtgcgcttggcgagcagctgcgcggtctgatt
gaagaggacgcgtatatcgaacgtggtgaacgtcgtcagccgattgccagctttgaacag
gcgattgactggttaggcaaagagtcgcgccgtggtctgtcggttcagcgctacaaaggt
ctgggagaaatgaacccggagcagctgtgggaaaccacgatggacccggacagccgtcgc
atgctgcgcgtaaccattaaagacgccgttgctgccgatcagctgtttaccacgctgatg
ggggatgcggtagaacctcgtcgcgcctttattgaagaaaacgccctgcgcgccgccaat
atcgatatttga
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