Erwinia pyrifoliae Ep1/96: EpC_13390
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Entry
EpC_13390 CDS
T01000
Symbol
nfo
Name
(GenBank) Endodeoxyribonuclease IV
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
epy
Erwinia pyrifoliae Ep1/96
Pathway
epy03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
epy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
EpC_13390 (nfo)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
epy03400
]
EpC_13390 (nfo)
Enzymes [BR:
epy01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
EpC_13390 (nfo)
DNA repair and recombination proteins [BR:
epy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
EpC_13390 (nfo)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
CAX55118
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All DBs
Position
complement(1541753..1542595)
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AA seq
280 aa
AA seq
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MKYIGAHVSAAGGVDRAVERAAELEATAFALFTKNQRQWRAAPLTDEVISAFRRACEKHH
YTPAQILPHDSYLINLGHPTAEALEKSRDAFLDEVTRCQQLGLTLLNFHPGSHLQQITQD
ECLKRIAESINIVLDKTAGVTAVIENTAGQGSNLGFRFEHLAAIIDGVEDKSRVGVCIDT
CHAFAGGYDLRNEEACINTFAEFDRIVGFQYLRGMHLNDAKSEFNSRVDRHHSLGEGNIG
KTVFSWLMKDKRFDGIPMILETVNPDIWKDEIAWLKSEQK
NT seq
843 nt
NT seq
+upstream
nt +downstream
nt
atgaaatatattggcgcacacgtcagcgcagcgggcggcgtggatagggcggtagaacgc
gctgcggagttggaagccacggctttcgccctttttaccaaaaaccagcgccagtggcgc
gcggctccgctcactgatgaagtgatttccgcctttcgccgcgcctgtgaaaaacaccac
tataccccggcgcagatcctgccccacgacagctatctgattaatctggggcatccgacg
gcggaagcgctggagaaatcacgcgacgcctttcttgatgaagtaacccgctgccagcag
ctgggcctgacgctgcttaacttccatcccggcagccatttgcagcagattacgcaagat
gagtgcctgaagcgcatcgccgagtcgatcaatatcgtgctggataaaaccgctggcgtg
accgcagtgatcgaaaataccgccggtcagggcagtaacctggggtttcgcttcgagcat
ctggcggcgattattgacggcgtggaagataaatcgcgcgttggcgtgtgtattgatacc
tgccatgcttttgccggcggttacgacctgcgcaacgaagaagcctgtatcaacaccttt
gccgagttcgatcgcatcgtgggtttccagtatctgcgcggtatgcatcttaacgacgct
aaaagtgagtttaacagccgggtcgaccgtcaccacagtctgggcgagggcaatatcggt
aagacggtattcagctggctgatgaaggataagcgctttgatggtattccaatgattctg
gaaacggtcaatccggatatctggaaagatgaaattgcctggttgaagtcagaacagaaa
taa
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