KEGG   Equus przewalskii (Przewalski's horse): 103555787Help
Entry
103555787         CDS       T04644                                 

Gene name
LIG1
Definition
(RefSeq) DNA ligase 1
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
epz  Equus przewalskii (Przewalski's horse)
Pathway
epz03030  DNA replication
epz03410  Base excision repair
epz03420  Nucleotide excision repair
epz03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:epz00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    103555787 (LIG1)
   03410 Base excision repair
    103555787 (LIG1)
   03420 Nucleotide excision repair
    103555787 (LIG1)
   03430 Mismatch repair
    103555787 (LIG1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:epz03032]
    103555787 (LIG1)
   03400 DNA repair and recombination proteins [BR:epz03400]
    103555787 (LIG1)
Enzymes [BR:epz01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     103555787 (LIG1)
    6.5.1.6  DNA ligase (ATP or NAD+)
     103555787 (LIG1)
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     103555787 (LIG1)
DNA replication proteins [BR:epz03032]
 Eukaryotic Type
  DNA Replication Elongation Factors
   Other elongation factors
    103555787 (LIG1)
 Prokaryotic Type
   Elongation factors (archaeal)
    Other elongation factors
     103555787 (LIG1)
DNA repair and recombination proteins [BR:epz03400]
 Eukaryotic Type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     103555787 (LIG1)
   NER (nucleotide excision repair)
    Other NER factors
     103555787 (LIG1)
   MMR (mismatch excision repair)
    Other MMR factors
     103555787 (LIG1)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C DDR PucR
Motif
Other DBs
NCBI-GeneID: 103555787
NCBI-ProteinID: XP_008525779
LinkDB All DBs
Position
Un
AA seq 734 aa AA seqDB search
MTPPELPENSKPPTDSVAEPEGAVKQEPQEDQPQPPPRAPKTLSSFFAPRKPAVKKEVKE
EEGSGAPRKEETKGPLDPPSYNPAKNNYHPVEDACWKPGQKVPYLAVARTFEKIEEVSAR
LRMVETLSNLLRSVVALSPPDLLPILYLSLNRLGPPQQGLELGIGDGILLKAVAQATGRQ
LESVRAEAAEKGDVGLVAESSRSTQRLMLPPPALTASGVFTKFQDIARLAGSASTTKKMD
VIKGLFVACRHSEARFIARALSGRLRLGLAEQSVLAALAQAVSLTPPGQEFPPAVVDAGK
GKTPEARKTWLEEQGMILKQTFCEVPDLDRIVPVLLEHGLERLPEHCRLSPGVPLKPMLA
HPTRGVSEVLKRFEEAAFTCEYKYDGQRAQIHVLEGGEVKIFSRNQEDNTGKYPDVISRI
PKIKLPSVTSFILDTEAVAWDREKKQIQPFQVLTTRKRKEVDAAEIQVQVCLYAFDLIYL
NGKSLVREPLSRRRQLLRENFVETEGEFVFATSLDTKDTDQIAEFLEQSVKDSCEGLMVK
TLDVDATYEIAKRSHNWLKLKKDYLDGVGDTLDLVVIGAYLGRGKRAGRYGGFLLACYDE
ESEELQAICKLGTGFSDEELEEHHQSLQALVLPSPRPYVRADGAVAPDHWLDPSAVWEVK
CADLSLSPIYPAARGMMDGEKGISLRFPRFIRVREDKKPEEATTSAQVAHLYWKQSQIQN
QQGTDVDSDPEDFY
NT seq 2205 nt NT seq  +upstreamnt  +downstreamnt
atgacgcccccagagctcccagagaactccaagcccccgacggacagcgttgccgagcct
gagggggccgtgaagcaggagccgcaggaggaccagcctcagcctcctcccagagccccc
aagacgctcagcagcttcttcgccccccggaagcctgcagtcaaaaaagaagtgaaagaa
gaggaggggtccggcgccccgagaaaggaggagaccaagggacccctggaccctcccagc
tacaatcctgccaagaacaactaccatcccgtcgaagacgcctgctggaagccgggccag
aaggtcccttatctggcggtggcccggacgttcgagaagatcgaggaggtttctgcgcgg
ctccggatggtggagacgctgagcaacttgctgcgctccgtggtggccctgtcaccccca
gacctgctccccatcctctacctcagcctcaaccgccttgggccgccccagcagggcctg
gagcttggcatcggggacggcatccttctcaaggccgtggcgcaggccacaggtcggcag
ctcgagtctgtccgggctgaggccgccgagaagggcgacgtggggctggtggccgagagc
agccgcagcacgcagaggctcatgcttcccccgcccgccctcaccgcctctggggtcttc
accaagttccaggacatcgcccggctcgctggcagcgcttccacaaccaagaagatggac
gtcatcaaaggcctctttgttgcctgccgccactcagaagcccggttcatcgccagggcc
ctgagtggacggctgcgcctcgggctggcagagcagtcggtgttggccgccctggcccag
gccgtgagcctcacacccccgggccaagaattccccccggccgtggtggatgctgggaag
ggcaagacaccagaggccagaaaaacatggctggaggagcaaggcatgatcctgaagcag
acgttctgtgaggtgcccgacctggaccggatcgtccctgtgctgctggagcatggcctg
gaacgcctcccggagcactgcaggctgagcccaggggtccccctgaaaccaatgttggca
caccccacccggggcgtcagtgaggtcctgaaacgcttcgaggaggcagccttcacctgc
gagtacaaatacgatgggcagagggctcagatccatgtcctggaaggtggggaggtgaag
atcttcagcaggaatcaggaggacaataccggaaagtaccccgacgtcatcagccgcatc
cccaagattaaactcccgtcagtcacgtccttcatcctggacactgaagccgtggcctgg
gaccgggaaaagaagcagatccagccattccaagtgctcaccacccgcaagcgcaaggag
gtggacgccgcggagatacaggtgcaggtgtgtctgtacgccttcgacctcatctacctc
aatggaaagtccctggtgcgggagcccctttcccgacgccggcagctgcttcgggagaac
ttcgtggagacggagggcgagttcgtcttcgccacctccctggacaccaaggacacggac
cagatcgccgagttcctggagcagtcggtgaaagactcctgcgaggggctcatggtgaaa
accctggatgtcgacgccacctacgagatcgccaagaggtcgcacaactggctcaagctg
aagaaggactacctcgatggcgtgggcgacaccctggacctcgtggtgatcggcgcctac
ctgggccgggggaagcgggctggccgctacgggggcttcctgctggcctgctacgacgag
gagagtgaggagctgcaggccatatgcaagcttggtactggcttcagcgacgaggagctg
gaggagcatcaccagagcctgcaggccctggtgctgcccagcccgcgcccctacgtccgg
gcggacggcgccgtggcccccgaccactggctggaccccagcgccgtgtgggaggtgaag
tgcgccgacctgtccctctcccccatctaccctgctgcccggggcatgatggatggcgag
aaggggatctcccttcgcttccctcggtttattcgcgtccgtgaagacaagaagcccgag
gaggccaccaccagcgcccaggtggcccatctgtactggaagcaaagtcagattcagaac
cagcaaggcacggacgtggactccgacccggaagatttctactag

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