Eremothecium cymbalariae: Ecym_4018
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Entry
Ecym_4018 CDS
T02237
Name
(RefSeq) hypothetical protein
KO
K09291
nucleoprotein TPR
Organism
erc
Eremothecium cymbalariae
Pathway
erc03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
erc00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
Ecym_4018
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
erc03019
]
Ecym_4018
Messenger RNA biogenesis [BR:
erc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
Ecym_4018
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_MLP1_2
Motif
Other DBs
NCBI-GeneID:
11469245
NCBI-ProteinID:
XP_003645918
UniProt:
G8JSU8
LinkDB
All DBs
Position
4:complement(42777..48086)
Genome browser
AA seq
1769 aa
AA seq
DB search
MSQRGASDSSISVDYSKVAAFLEVDEAKVQELDESMVTVFFLKANEFSKMKADNMRLSIS
IDGLKCNFEQKINTFKEQVEKLLSDVASRQQEKQQTEDEKLKLMNEKAQLSMEVLKLRSQ
VEEAKQGMEIIASAKQDVTKLLEEKISDLAASKEESDRLLAANKELRKSSIDLEFIIQGY
KSQELREKSEIQRLHQELNLVKSNADWLSKELESKNEQLNSFREKTNSELQNGYEQVNSL
KSQLEFARANNSTLKAKTAELSNQLQEKLVETKKLADVLNTEKEEFTREMSLKQRLIDLL
ESQVSSMKSDLENAYQSANQNGMSTPEKDQLLDELIDTKKNLEATQAENIKLEATVNELL
SVNGKNGVAVINSNVSDTSLDSKISTVPKLCGDIGILKKQLVQERRQKEELQNQVESFVV
ELEHKIPILNSFKERTDMLERELNDVTLLLESTAKQRDQKTIELNQYKNKINNYESQVCS
LIVQRSDLAHQVQYLLMQLSVRDDAHGPLTEQEVEFVKRIISSEDEAPKSDTQGIISERL
VQFKSVIELQSKNAELLNTIRQLADKLEDEEKKSRFRLKSVETQTVKEAKEAILSLQEHV
QRLEDQLKIVSKERDAFKLANSANKQGDSAPSSTYQSKKLDEHIMELEKRLKNLAEQSQD
NIKLLNDEIKALYKAKSEVTVILEQERSSKVLAEERLKLIQSTLSLTKEENLELHKRSDD
LQRVLLKQDEKTQSTIDEIIATKSQLSNLTSKLAILTSERDFLRKIEAELKNENEALTKE
NTTSKILVSQLQTLQRERDILLEEAQTNYRKNIEKLESDLHETREHLVRRTREYEEQRVS
DTSQYKWFQAKVDSLNEQLDNARKTLQEKTNSIETLQLHAKSLTAKLEEAELRTQSYSVL
ANADDITDKIETLRKNLEKANINLADAYSQIEQYKSMAKVSEQSAVEISKALEESQANYR
KNIALLEQERKSLTDQIALLNDQIKDLNSELDHQKSQNQSEKSELIKKLSILQGSQRSLD
ELKSEYEEKISKLQEDLTQQASYANQAQKNYEQELQKHADVTKTISLLREESQKYKSEME
GFKRSASEAKSALERNEQSWCQQVADLESQLSLAQQRTEELNTQNRLLYDQVELLSKATS
SDSEAAASMSAESRELIMTLRRERDILETKLDVSIREEKILRQRLGLAKTELENVRLEFS
KTQATAPDSIFARESQEQIMEKLNQLNLLRESNVTLRNESKKYLEQSQHFQNEIAKLQEQ
LQPLESQLKSLTITISERDQQISLLKEESSRWKQRSQDILHKYERIDPVEHQKLADEVTE
LKNELEKKSLENLESQERFRKLRKQANERLDEFKAAKAKVESEFEAVSIAKAQLEAELAQ
TLDKVSELESKLSSSANEKNGEADSLKEELEELRANFIEANEAVADIKAEAASSEKDLKN
QIQELTEKIKTLESEIEHSELEAKNSNDSPDFAPIVENMKKKFEEEKQVLIQEKDEELRM
KLEEIQKQYEEERERELSELKASLVESTPNAPLIDEETLKSKLEAEYEKKTLERIREAEE
ALKKRIRLPSEERINQVIERRQRALDQEFELRVRARALELFKENPESFVGDTAKLIKEHQ
EEMDKLEAKFDEQLALVRKKAFEEGKQQLVMKVKLLESKIAKLEGQPNKINLNNSVPSKI
PIDNNNNSSPQGAQPIAIKPSPFQVAFGKAMENTSFGSFKGSLLDSKQFIANTADTSTST
LTGNVGTNTNKRQSEDELAQSPEKRPKDD
NT seq
5310 nt
NT seq
+upstream
nt +downstream
nt
atgtctcaaaggggtgcgtcggattcctcaatctctgtagactattctaaagttgccgct
tttttagaagtagatgaagcaaaagttcaagaattagatgagtctatggtgactgtcttc
tttctgaaggctaatgagtttagcaaaatgaaagcagataatatgcgattatcgatttcc
attgatggattaaagtgtaattttgagcaaaagatcaatacgtttaaggagcaagtcgaa
aagctactaagcgatgtggcatcacggcagcaggaaaaacagcagacggaggatgagaag
ttaaaactaatgaatgagaaggcacagttatcaatggaggtgctgaagcttcgttctcag
gtagaggaggcaaaacaggggatggagataattgcttcagcaaagcaggatgtgactaaa
ctactggaggagaagatatctgacctggcggcgagcaaagaggagtcagataggctttta
gctgcgaataaggagttgcgaaagtcctcaatagatttagaatttatcatccaaggatac
aagtcacaggagttgcgcgagaagtcggagatacaaaggttacaccaggagttaaatttg
gtaaagtccaatgccgactggttgagcaaagaactggaatcgaagaatgaacaattgaat
agctttcgtgagaagacgaattcggaattacaaaatggttacgagcaagtaaatagttta
aaaagccaacttgaatttgcccgcgcgaataactcgacacttaaagctaagactgctgag
ttatctaatcagctgcaagagaaattagtagagactaaaaaattagctgatgtgttgaat
acagagaaggaagagtttacacgggagatgtctctgaaacaacggttgattgatctttta
gagagtcaagtgtcttctatgaaatcagatttggagaacgcgtatcaatctgcgaatcaa
aatgggatgtctacgcctgaaaaagatcaacttctggatgagttaattgatacaaaaaag
aatttggaagctactcaggcggaaaatattaaattagaggcaactgtaaacgaactactc
tccgtcaatggcaagaatggtgtcgcagtcattaattccaatgtatcagatacttctctc
gacagtaaaatttctacagtgccaaaattatgcggcgatattggtattttgaagaagcag
cttgtccaggaaagacgtcaaaaagaagaactccagaaccaggtagaatcattcgtcgtt
gaattggagcacaagattccaattttaaattcctttaaagaaagaacagatatgttggaa
agggaattaaatgacgttactctattactggaatccacagcaaaacagagggatcagaaa
accatagaattgaatcagtataagaacaaaattaataattatgaatcccaagtttgttca
ctcatcgtgcaacgctccgacttagcccatcaagtacaatatctgctaatgcaactatct
gtacgtgatgacgcacatggaccattgaccgagcaagaagttgaattcgttaaacggatt
atatcctctgaagatgaggcaccaaagtcggatacgcagggaattatctcagaacgatta
gtacaattcaaatcagtgattgaactgcaatccaaaaacgccgaactcctcaataccatt
aggcaacttgctgataaacttgaagatgaagaaaaaaaatcaagattcagactgaaatct
gtggagacccaaacagttaaagaagcaaaggaggctatcttatcacttcaggaacatgtt
caaagattagaagatcaattgaaaattgtatcaaaagaacgggatgctttcaaattagca
aattccgcaaataagcaaggtgattctgctccctcctcaacatatcaatcaaaaaagctg
gatgagcacattatggaattggaaaaacggttaaaaaatctggcggaacagtcccaggat
aacatcaaacttttaaacgatgagataaaagctctctacaaggctaagtctgaagttact
gtgatattagagcaagagagatcctcaaaagttctggctgaggaaaggttgaaattgata
caatcgactttatccttgaccaaagaggagaatttagagctgcacaaacgatcagatgat
ttacaacgcgtgttattaaaacaggatgaaaaaactcaatctacaatagacgaaataatt
gccacaaagtctcaactatctaacttgacctccaaactagcaattttgacatctgaaaga
gacttccttcgcaagattgaagctgaattaaagaatgaaaatgaagctttaactaaggaa
aatactacatcaaagattcttgtttcgcagctgcaaacgctacagcgtgagcgcgatatc
ttgcttgaggaagctcaaacgaactatagaaaaaacatagagaaattggagagcgattta
cacgaaaccagggaacatttggtaagaaggactagggagtatgaagaacaaagggtatct
gatacttcccagtataagtggtttcaggccaaggtagactctctaaacgagcaattggat
aacgcccgcaagactttacaagaaaagacaaattctattgaaactctgcagctacatgcc
aaatctttgactgcaaagttagaggaagcagaattaaggacacaatcttatagtgtgttg
gcaaatgcagatgatatcacagataagattgaaacactgaggaaaaatcttgagaaggct
aatattaatttggctgatgcttattcccaaatcgaacaatataaatcaatggcgaaggtc
tcagagcagtctgcggttgaaatatctaaagctttagaagaatcacaagcaaattatagg
aaaaatattgctctattggagcaagaaagaaaatccttaactgatcagatagccttatta
aatgaccagatcaaagacctcaatagtgagctggatcatcagaaatcccaaaaccaatcc
gaaaagtcggaattaatcaagaaattaagtatcttgcaagggagtcaaagaagtttggac
gaactcaaatcagaatatgaagaaaaaatttcgaagttacaagaggatttaactcaacaa
gcttcatatgcgaaccaagctcaaaagaactacgaacaggaattacaaaagcatgctgac
gtcacaaaaacaattagtttgctcagagaggaatcccagaaatataaatctgagatggaa
ggattcaagagatcagcgagcgaggcgaaatctgctttggagcggaatgagcaaagttgg
tgccagcaagtggctgatttagaatctcaattaagtttagcacaacagcgtactgaagag
ttgaatacacaaaataggttattgtatgatcaggttgagcttctttcaaaagctacatct
tcagattcagaagctgcagcaagtatgtctgccgaatcaagagagttgattatgactcta
cgcagagagagagacattttagaaactaagcttgatgtttctattagggaagagaagata
ctacgccagaggttggggctggcaaaaacagaattggaaaatgttaggttagagttctca
aagacgcaagccacagctccagacagcatatttgcacgggaaagccaagaacaaatcatg
gaaaaattaaaccagttgaatttgttgcgtgaaagtaatgttaccttgcgtaatgaatct
aaaaaatacctcgagcagagtcagcatttccagaatgagatagcaaagcttcaagagcag
ttacagcctctagaatctcaactcaagtctttgactataactatcagcgaacgagatcaa
caaataagcttactcaaagaagaaagtagtcgttggaagcagcgttctcaagatattttg
cataagtacgaacgtattgatcctgttgagcatcagaagctggctgatgaagttactgaa
ttgaaaaatgaacttgaaaagaaatctttagagaatctggaatcacaggagaggtttaga
aagctcagaaagcaggctaatgagaggctggatgaatttaaagctgcgaaggctaaagtc
gaatccgagtttgaggctgtatctatagcaaaagcacaattagaggccgaattagctcaa
acattggataaggtttctgagttagaatcgaagctttcttcctcagctaatgaaaagaac
ggagaggcagatagtctaaaggaggaactggaggaattaagggcaaattttattgaagcc
aatgaagctgttgctgatataaaggctgaagcggcatcttctgagaaagatctaaagaac
caaatacaagaattgaccgagaagattaagactctagaatcagaaattgagcattctgaa
ctggaagctaagaactcaaacgattctccagattttgctcctatagttgaaaatatgaag
aaaaagtttgaggaagaaaagcaagtgttaattcaagaaaaggatgaagagctaagaatg
aagcttgaggagatacaaaagcagtatgaggaagagagggagagggagctcagtgaattg
aaagcttctctagtggagtcgactccaaatgcacctttaatagatgaggagactttgaag
agtaagctggaagcagagtacgaaaagaagaccttagaaagaattcgcgaagcggaagaa
gctctaaagaaacgtattaggctaccgtctgaagagagaattaaccaagttattgagagg
agacaaagggcattagaccaagagttcgaacttagagtacgagcccgtgctcttgaactg
tttaaagaaaatcctgagtcatttgtcggagatactgcaaaactgatcaaggaacaccag
gaagaaatggacaaactggaagcgaagtttgatgaacaattggcgttggtcagaaagaaa
gcatttgaagaggggaaacagcagctcgtaatgaaggtcaagctgctggaaagtaagata
gccaaattagaaggccagccaaataaaattaacctgaataattctgttccatcaaaaatt
cctattgacaataataacaactcatcaccgcagggagcgcaacctatagcgatcaaacct
tctccattccaagttgcttttgggaaagcaatggaaaatacttcctttggttcattcaag
ggttcgttgttagattctaaacagtttatagctaacacagctgacacatcaacatcaaca
ttgacaggcaacgttggtactaataccaacaagcgccaatctgaagacgaattggcccaa
tcacctgaaaaacgcccaaaggatgactaa
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integrated database retrieval system