Eremothecium cymbalariae: Ecym_5625
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Entry
Ecym_5625 CDS
T02237
Name
(RefSeq) hypothetical protein
KO
K02327
DNA polymerase delta subunit 1 [EC:
2.7.7.7
]
Organism
erc
Eremothecium cymbalariae
Pathway
erc03030
DNA replication
erc03410
Base excision repair
erc03420
Nucleotide excision repair
erc03430
Mismatch repair
erc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
erc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Ecym_5625
03410 Base excision repair
Ecym_5625
03420 Nucleotide excision repair
Ecym_5625
03430 Mismatch repair
Ecym_5625
03440 Homologous recombination
Ecym_5625
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
erc03032
]
Ecym_5625
03400 DNA repair and recombination proteins [BR:
erc03400
]
Ecym_5625
Enzymes [BR:
erc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Ecym_5625
DNA replication proteins [BR:
erc03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
Ecym_5625
DNA repair and recombination proteins [BR:
erc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
Ecym_5625
MMR (mismatch excision repair)
DNA polymerase delta complex
Ecym_5625
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B
DNA_pol_B_exo1
zf-C4pol
DNA_pol_B_2
divDNApol
DNA_pol_B_exo2
Ribosomal_L11_N
Motif
Other DBs
NCBI-GeneID:
11468715
NCBI-ProteinID:
XP_003647178
UniProt:
I6NE69
LinkDB
All DBs
Position
5:complement(1258119..1261397)
Genome browser
AA seq
1092 aa
AA seq
DB search
MTQGLKRDCEVDDGVMEKKLRTQSFDYSAGSEPVSTIQIIPSDRYRKQSHQGYKSPQVPN
TSGNVDPTVFERELLMMDHETVTAQEKNQQATWPRRGIPSDFEANTCDLSFQQLDAEQAV
LPGCRDGNTAAVVRFFGVTDAGNSVLCNVTGFKHYMYVPAPSGFRPSSDLKVLKDYLNDK
FDNVVDSIEVVWKQSIWGYSGDEKLQFLKVLVPDPYGLNKVRTAFEKGYVNPNDTWFQGG
TTTYDNIAFTLRLMIDCGIVGMSWITLPKGKYTLIPKHQKVSSCQFEVAINYKDLIAHPA
EGDWVHSAPLRILSFDIECAGRVGVFPEPDTDPVIQIANVVSIAGHSKPFIRNVFTVRSC
APITGSQIFEHEREEDMLKHWRDFVVQVDPDVIIGYNTTNFDFPYLINRAAALHVDSFPY
FGRLPNVKQVIKETVFSSKAYGTRESKTINIDGRLQLDLLQFVRREYQLRSYTLNSVSAH
FLGEQKEDVHHTIISSLYNGDSETRRRLAVYCLKDAYLPLRLLEKLMALVNYAEMSRVTG
VPFSYLITRGQQIKVISQLFRKCFQIDIVIPNMHTSPSDEQYQGATVIEPIRGYYDVPIA
TLDFNSLYPSIMMAHNLCYTTLCNKSTVARLNLKENEDYIITPNGDYFVTEKRRRGILPT
ILHELISARKRAKTDLKNETDPFRKDVLNGRQLALKISANSVYGFTGATVGKLPCLAISS
SVTSFGRTMIEATKRAVEEKYTVKNGFSHDAVVIYGDTDSVMVKFGKTDLQETMNLGAEA
AAYVSSLFKHPINLEFEKVYFPYLLINKKRYAGLYWTRPEKHDKLDQKGLASVRRDSCPL
VSLVMNKVLRMILIDRNVPGALDFVRSTIDDVLQNRADISKLIISKTLAPSYTNSQPHAV
LAERMKKRDGVGPNVGDRVDYVIVGGNDKLYNRAEDPLYVLEQNIQIDSKYYLTTQLQNP
IISIIAPIIGERQANAMFVVKAIKISTGNQKGGLMGFIKKVQMCKGCKGPLKKGEGPLCG
NCKERSGELYLKAMYDVRELEEKFARLWTQCQRCSGSLHNEVLCSNQNCDIFYMRVKAKK
ELREKVEELSKW
NT seq
3279 nt
NT seq
+upstream
nt +downstream
nt
atgacacaagggttaaagcgagactgtgaggttgatgacggggttatggagaagaagctg
aggacgcagtcttttgattactctgcgggaagtgagccggtgtcgactatccaaattatt
cccagtgataggtaccgaaagcagagccatcaagggtacaagtcaccacaggttccgaat
acaagtggtaatgtggatcctacggtgttcgagcgtgaattgctgatgatggatcatgag
acagtcacggcgcaggagaaaaaccagcaagctacatggcctagacggggtataccgtct
gattttgaagcgaatacgtgtgatctatcatttcaacagctggatgcggaacaagcggtt
cttcctggatgtagagatggtaatactgcggcggttgtgcggttttttggtgtcaccgat
gcaggtaattcagtcctgtgtaatgtaactgggttcaagcactacatgtacgttccagca
ccatcgggatttcgtcctagttcagatttaaaggttttaaaggactatttgaatgataag
tttgataatgttgtggattccatagaggtggtttggaaacaaagtatatggggatattcc
ggtgatgaaaagttgcagtttttaaaggtgttggtgcctgatccatacgggctgaataag
gtccgaactgcatttgagaagggttatgtgaacccaaatgatacttggttccaaggaggc
actacgacgtacgacaatattgctttcactttgaggctgatgatagattgcggtattgtg
ggtatgtcttggataaccctgcctaaggggaagtatactcttattcctaaacaccaaaag
gtttcttcctgtcaatttgaagtggccattaactataaagacttaattgcgcatccggca
gaaggtgattgggttcatagtgccccgttgcgtattctatcatttgatattgaatgtgcg
ggtagagttggtgtgttccctgagcctgatactgatccagtgattcagatagcaaacgtt
gttagtattgcaggtcattctaaaccttttattcgaaacgttttcacggtgaggtcttgt
gctccaatcaccggttctcagatttttgagcatgagagagaggaagacatgttaaaacat
tggcgcgatttcgttgtccaagtagatccagatgtgataattgggtataacactactaat
ttcgattttccctatttaattaaccgtgccgctgctttgcatgttgatagttttccgtat
tttggcaggttgccaaatgtaaaacaagttatcaaggaaactgttttttcatcaaaggca
tatggtacaagagagtccaaaactattaacattgatggacgtctacagctagatttgttg
cagtttgttagacgtgaatatcaattacgttcatataccttgaattctgtttctgctcat
ttcttaggtgaacagaaagaagatgttcatcacaccattatttcttcgttgtataatggt
gatagcgaaacaagaagacgtttggctgtttattgtttgaaagatgcttatttacctttg
cgattgttagaaaagttaatggccttagttaactatgcagaaatgtcaagagtcaccggg
gttcccttttcctacctcattacgagaggtcaacaaattaaagtcatatctcagctattt
cgcaagtgttttcaaatagatattgtgattccaaatatgcatacatctccttctgatgaa
cagtatcagggggctacagttatagaaccaataagagggtattacgacgttcctatcgca
acattggatttcaattccctatacccatcaattatgatggcacataatttatgttacact
accttgtgtaataaatccaccgttgcacgcttgaatttaaaggaaaacgaggactatatt
atcactccaaatggagactactttgtcactgaaaaacgtaggcgtggaatattacctact
atcttacatgaattaattagcgcaagaaaacgtgctaagactgacctaaagaatgaaact
gacccatttagaaaagatgtcttaaatggtaggcagctggcattaaaaatatctgcaaat
tccgtttatggattcaccggcgcaacagttggaaagctaccatgtcttgccatctcctca
tcggtcacatcatttgggcgtactatgattgaagccacaaagcgtgcagtcgaagaaaag
tatacagttaaaaacggcttcagtcatgacgctgttgttatatatggtgataccgattct
gtgatggtaaagttcggtaaaactgatcttcaggaaacaatgaatctaggcgctgaagct
gctgcatatgtttcatctctattcaagcatccaatcaatttagagtttgaaaaagtctac
tttccatatttattgattaacaaaaagagatatgctggtttgtactggactaggcctgaa
aaacacgataaattagatcagaaagggctagcttcagttcgtcgtgactcatgtcctctg
gtctcgcttgttatgaataaggttttgcgaatgattctaatagataggaatgtaccgggc
gctttggattttgttagaagcaccattgatgatgttctgcagaatagagcagatatttct
aaattaattatttccaaaacactagcaccaagttatacgaactcacagcctcatgcagtt
ttggcggaacgtatgaaaaagagagatggcgttgggccaaacgttggtgacagagtcgat
tatgtaattgtgggtggaaacgacaagctatacaaccgagcagaagatccgttatatgtc
ttggaacaaaacattcagatcgattcaaaatactatttgacaacgcagttacaaaatcct
attattagcattatagcgccgattattggcgaaagacaagcaaatgcaatgtttgttgtg
aaagctataaagatttcaactggtaatcaaaagggagggttgatgggttttattaagaaa
gtccagatgtgtaaaggttgtaagggcccactcaagaagggcgaagggccactgtgtgga
aattgcaaagaaaggtcaggtgagttatatctcaaggcaatgtacgacgtgcgggaattg
gaagaaaagtttgccaggttatggactcaatgtcaacgatgctctggtagtttgcacaat
gaagtgctttgttccaaccaaaactgtgacattttttacatgagagttaaagctaagaaa
gaactacgagagaaagttgaggaattaagcaagtggtga
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integrated database retrieval system