Erysipelothrix sp. HDW6C: G7062_08680
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Entry
G7062_08680 CDS
T06512
Name
(GenBank) recombinase RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
erd
Erysipelothrix sp. HDW6C
Pathway
erd03410
Base excision repair
erd03430
Mismatch repair
erd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
erd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
G7062_08680
03430 Mismatch repair
G7062_08680
03440 Homologous recombination
G7062_08680
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
erd03400
]
G7062_08680
DNA repair and recombination proteins [BR:
erd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
G7062_08680
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
G7062_08680
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
G7062_08680
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
DHHA1
RecJ_OB
Motif
Other DBs
NCBI-ProteinID:
QIK70368
UniProt:
A0A6G7Y145
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Position
complement(1815532..1817073)
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AA seq
513 aa
AA seq
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MKAHLQTFEPLVQKLFATMELTEVQQDELIAPPTKLLEDPGIFAVIDFFKQAQKIIVCGD
YDCDGISSTSIAVLMARSLGIDVGYYIPNRLKDGYGVSNQTIEMASQRGYTDVLIIDNGV
KAHEQIALANRLGMNVAVVDHHIQDGPLPVKAFLHPEVCGDYAHSMCASGLIYAVAETMG
IATDYMLALAALATIGDVMPLWGKNREIVRRGTEVLNKNQFKQFDLIVKRNRYTNYSAKT
LAFQVVPKVNSVGRMGDVANVNTTVSFFTSQDEGEIASYATQLLKLNDYRKSEGKKLEAL
AATMINDDPVQIIAHNDFHEGLLGIVANQVAGKTLKPTLVLTEYEDTLKGSGRSMTYSLQ
SIFKHINPDYFVAMGGHDFAYGMTLKKEYFEAFKQDINALVADFEPFESSQDGIVLIEPH
EYTLDALHQLMSFEPYGEGFQLPLVKFALPEHFGLVNLNGYGYKFTFTGFDFDEAVFFSK
QYERAALQAATSVTGSLDLSNPRKKSLLIEEIA
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atgaaagcacaccttcaaacctttgaaccacttgttcaaaaactctttgcaacaatggaa
ctcacagaggttcaacaagacgagttaattgcacctcctacgaaactattggaagatccg
ggaatctttgcggtcattgatttctttaagcaagcccaaaaaattattgtttgtggggac
tatgactgtgatgggattagctcaaccagtattgcggtgcttatggcacgttcgcttgga
atcgatgtcggatattacatacccaatcgccttaaagatggttatggtgtttcaaaccaa
accatagaaatggcatcgcagcgaggttatactgatgttcttattattgacaatggtgtc
aaggcacatgaacaaatcgctttagcaaatcgtttgggcatgaatgttgccgttgttgat
catcatatccaagatggccccttgcccgtgaaagcctttcttcatcccgaagtctgtggt
gattatgcgcattcaatgtgtgccagtggtctcatctatgctgttgcagaaacaatggga
attgctacggattatatgcttgcactggctgcactggctaccattggcgatgtcatgcca
ctatggggtaagaatcgcgagattgtgagacggggaacagaagtactcaacaaaaaccaa
ttcaaacaatttgatttaattgtaaaacgcaatcgatacaccaactacagtgcaaagaca
cttgcatttcaagttgtacccaaagtcaacagtgtggggcgcatgggcgatgttgcaaat
gtaaataccactgtatccttttttacaagccaggatgagggtgaaattgcatcttatgcg
acacaacttctcaaactgaacgattatcgcaagagcgaaggtaagaaattagaagcactt
gcggcaaccatgattaatgatgatcccgttcaaattatcgctcataatgattttcatgaa
ggtcttcttggaatcgttgcaaaccaagttgctggcaaaacacttaaaccaacacttgta
ctcacagagtatgaggatacgcttaaagggagtggtcgtagtatgacctattctctgcaa
tcgatatttaagcacatcaacccagattattttgtcgcgatgggtgggcatgatttcgct
tatggaatgacactaaaaaaagaatactttgaagcgtttaaacaggatattaatgccttg
gttgcagatttcgaaccgtttgaatcatcgcaagatggaattgtcctcatcgaaccacat
gagtatacgttggatgcattacatcaattaatgtcatttgagccctatggcgaaggattt
caattgccattggttaagtttgctcttccagaacattttggattggtaaatcttaatggt
tatggttataaatttacttttacaggctttgactttgatgaagcggtgttcttttccaag
caatatgaacgggcagcattacaagcggctacatctgtcactggcagtcttgacctgagc
aatccacgaaaaaaatcattgttaatagaagaaattgcgtaa
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