Agathobacter rectalis ATCC 33656: EUBREC_1764
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Entry
EUBREC_1764 CDS
T00909
Name
(GenBank) DNA polymerase III, alpha subunit
KO
K03763
DNA polymerase III subunit alpha, Gram-positive type [EC:
2.7.7.7
]
Organism
ere
Agathobacter rectalis ATCC 33656
Pathway
ere03030
DNA replication
ere03430
Mismatch repair
ere03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ere00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
EUBREC_1764
03430 Mismatch repair
EUBREC_1764
03440 Homologous recombination
EUBREC_1764
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ere03032
]
EUBREC_1764
03400 DNA repair and recombination proteins [BR:
ere03400
]
EUBREC_1764
Enzymes [BR:
ere01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
EUBREC_1764
DNA replication proteins [BR:
ere03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
EUBREC_1764
DNA repair and recombination proteins [BR:
ere03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
EUBREC_1764
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
RNase_T
DNA_pol3_finger
PHP
DNA_pol3_a_NI
DNA_pol3_a_NII
HHH_6
tRNA_anti-codon
RNase_H_2
DEDDh_C
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
ACR75508
UniProt:
C4ZA67
LinkDB
All DBs
Position
complement(1640981..1645513)
Genome browser
AA seq
1510 aa
AA seq
DB search
MTKTFKEVFPTLKLDKDMENLLENADVTRISVNHARDFYKIYVKAKRLIFKKNIWKLEES
IKKQIFKSKDITVKIIESYELSSQYTPKTLFDVYFDSILDEINSHSVLLYNLLRTSKWSF
TDDTHVTVTLEETIIAKTRGNTVIEFLEKVFCERCGMDFIVNLQYEKPKISKYRQNADKQ
IEQEVQNIVARTKFAMAKDVGDEDAKVAVDDGAMFVGGSENTSDTKKSGTSDFPKASNKK
NEAKTGPDKKPEKKFEKKFERKGDFRRKYDNDPDIVYGRSFDDEEMAIEKIDGPIGEVTI
KGKILTVESREIRNEKTIIMFAVTDFTDTIMLKLFARNDDVADILAYIAPGNFVKAKGVV
TVDKYDSDLSISSIVGLKKIPDFTSKREDTAAEKRVELHCHTKMSDMDGVSDVKDIVKCA
MRWGHKAIAITDHGDVQAFPDANHTVDDKFKVIYGVEAYLVDDTKDIVENAAGQSLDDKY
VVFDIETTGFSPEKNKIIEIGAVKVIGGEIVDRYSTFINPEVPIPFRIEELTSIRDDMVI
TSPTVDVILPQFMEFCKDCIMVAHNADFDMSFIKRNCALLGMECNPTIVDTVALARVLLP
QLNRFKLDTVAKALNISLDHHHRAVDDAACTAEIFVKFIEKLKDRGISSLDEVNALAKSS
VEMIRKMPTYHAIILATCDQGRTNLYRLISLSHIKYYNKRPRIPKSEFNKYRDGLLIGSA
CEAGELYRAILNGRPQEEITRLVNFYDYLEIQPLGNNAFMIRDEDSDIASNDDLIDINKR
IVKLGEEFGKLVVATCDVHFLNPEDEIYRRIIMAGKGFKDADEQAPLYLRTTEEMLKEFE
YLGSKKAEEVVITNTNKIADMCERISPVRPDKCPPVIENSDGMLREICYNKANRMYGDPL
PPIVKERLDRELNSIISNGYAVMYIIAQKLVWKSNEDGYLVGSRGSVGSSFVATMSGITE
VNPLHAHYLCTHCKYSDFDSPEVQAFSGRGGCDMPDKLCPKCGRPLSKEGFDIPFETFLG
FKGNKEPDIDLNFSGEYQSKAHKYTEVIFGEGQTFKAGTIGTLADKTAFGYIKNYYEERG
VRKRNCEIDRIVQGCVGVRRTTGQHPGGIVVLPMGEEINTFTPVQHPANDMTVDITTTHF
DYHSIDHNLLKLDILGHDDPTMIRMLQDLTGVDPTKIPLDDKAVMSLFQNTSALGIEPED
IDGCPLGALGIPEFGTDFAMGMLLDTKPKEFSDLIRIAGLSHGTDVWLGNAQTLIEEGTA
TISTCICTRDDIMTYLISMGLESEEAFNIMEKVRKGIIAKGKCPQWPQWKEDMKAHGVPD
WYIWSCEKIKYMFPKAHAAAYVMMAWRIAYCKVFYPLAYYAAYFSIRATGFSYELMCQGK
DRLENYMKDYKKRKDTLSNKEQDVFKDMRIVQEMYARGFDFMPLDIYRAHPNRFQIIDGK
LMPAINSIDGLGDNAAIYISEAAKDGPFLSKDDFRERTHVSRTAVDLMSDLGLLGSLPES
NQLSLFDFGA
NT seq
4533 nt
NT seq
+upstream
nt +downstream
nt
ttgacaaagacatttaaggaagttttccctacacttaagctggacaaggatatggagaat
ctgctggagaatgctgatgtcaccagaatttccgtaaaccatgcaagagatttttacaaa
atatatgtaaaagcaaaacgccttattttcaaaaaaaatatctggaagctagaagaaagc
ataaaaaaacagatatttaaaagtaaagatattacagtaaaaattatagagtcttacgag
ttgtcttcgcagtacacaccgaagactctttttgatgtctattttgacagtattcttgac
gaaataaacagtcacagtgtacttttgtacaatctgctgcgaacctcaaagtggagcttt
accgacgatacacatgtcacagtcacacttgaggagacaataatcgcaaagaccagaggc
aatacggtcatagaatttcttgagaaggtgttctgcgagcgctgtgggatggattttatc
gttaatctgcagtacgaaaaaccaaaaatcagcaaataccgtcagaatgctgacaagcag
attgagcaggaggttcaaaatattgtcgcccgcactaaatttgccatggcaaaagatgtc
ggtgatgaagatgctaaagtggctgttgatgacggtgcaatgtttgtaggaggcagtgaa
aatacatctgatacaaaaaagagtggcacatcagatttccctaaagcttcaaataagaag
aatgaagcaaagacaggccctgataaaaagcctgagaagaaatttgaaaagaaatttgag
cgcaagggagatttcagacgtaaatatgacaatgaccctgatatcgtgtacggaagaagc
tttgatgatgaggagatggctattgaaaagattgacggtcctatcggtgaggttacaata
aagggcaagatccttacggttgaatcccgcgaaatcagaaacgaaaagaccatcattatg
tttgcggtcactgatttcacagacaccatcatgctcaagctctttgccagaaatgatgac
gtagcagatattcttgcatatattgccccgggcaactttgttaaggcaaagggagttgtg
actgtagataaatatgacagtgatttgtcaataagttcaatagtcgggcttaaaaaaata
cctgactttacctcaaagagggaggatactgctgctgaaaaacgtgttgagcttcactgt
cacaccaagatgagtgacatggatggcgtgtctgacgtaaaggatattgtgaagtgtgcc
atgcgctggggacacaaggccattgctattacggaccacggtgatgtgcaggcattccct
gacgctaaccatactgtggatgacaaattcaaggtcatttacggtgtggaagcatatctg
gtcgatgatacaaaggatattgtggagaatgcagccggtcagtcgctggatgacaagtac
gtggtatttgatatagagacaacaggcttttctccggaaaagaataaaatcatagaaata
ggtgcggtgaaggtcatcggtggcgagattgtagaccgctattccacatttataaaccct
gaggtacctattccgttcaggattgaggagctcacctcgataagggatgacatggttatc
acatcgccaacagtggatgtcatactgccacagtttatggagttttgcaaggactgtatc
atggtcgctcacaacgctgactttgatatgagctttataaagcgaaactgcgcgctactt
ggcatggagtgtaatcctactatagtggacacggtggctcttgcgagagtacttctgcca
cagctaaacagatttaagctggatacagtggccaaggctctaaacatctcgcttgaccat
catcacagagcggtggatgatgccgcatgtactgcagagatatttgtcaaattcatagaa
aagctaaaggacaggggcatatcaagcttagatgaggtaaatgccctggcaaaatcatct
gttgagatgataaggaagatgcctacataccatgccatcattcttgcaacctgtgaccag
gggcgtaccaatctctacaggcttatctcgctgtcacacatcaagtattataataagaga
ccgagaataccaaaatcagagtttaacaagtatcgtgatgggcttttaataggctcagcc
tgtgaggcaggagagctttacagggctattttaaacggaagaccacaggaggaaatcaca
agacttgtgaatttctatgattacctggagatacagcctcttggcaacaacgcatttatg
atacgtgacgaggattccgatattgcttcaaacgatgaccttattgatataaataagcga
atcgtaaagcttggagaggaatttggaaagctggttgttgcaacctgtgacgtacatttc
ttaaatcccgaggacgagatataccgtcgtattatcatggccggtaagggctttaaggat
gcagatgagcaggctccgctttacttaaggaccacagaggaaatgctaaaggagtttgaa
tatctcggaagcaaaaaggctgaggaggtagtcatcaccaataccaataagatagcagac
atgtgtgagcgtatctcaccggtcagacctgataaatgtccgccggttatcgaaaactct
gacggcatgcttcgtgaaatctgctataacaaggcaaacaggatgtacggagatccgctg
ccgccgatagttaaggagcgtcttgacagagagctcaactctattatttcaaacggctat
gccgtaatgtacatcatcgcacagaagcttgtgtggaaatcaaatgaggacggctacctg
gttggctcgcgaggctccgtaggaagctcatttgtcgcaaccatgtcaggtatcacagag
gttaatccgctgcatgctcactatttgtgtacacactgcaaatacagtgattttgattca
ccagaggtacaggcattttcaggccgtggtggctgtgatatgccggataagctctgtcca
aagtgcggcagacctttaagtaaggagggctttgatattccgtttgagaccttcctcggt
ttcaagggaaacaaggagccggatatcgatctgaacttctccggtgagtaccagtcaaag
gcacacaaatataccgaggttattttcggagagggccagacctttaaagccggaaccata
ggtacacttgctgacaaaaccgcatttggatacattaaaaactattatgaggagcgcggt
gtcagaaagcgaaactgcgagatagacaggatagtgcagggctgcgttggtgttcgacgt
actacgggacagcatccgggtggtatagtcgtgctgccgatgggtgaggagattaatacc
tttactcctgtacagcatcctgcgaatgatatgaccgttgacatcacgacaacgcatttt
gactaccattcaatcgaccacaacctgttaaagctcgatatacttggacacgatgatcct
accatgattcgtatgctgcaggatctgacaggtgttgacccgacaaagattccgcttgac
gacaaagctgtcatgtcactgtttcagaacacctccgctttgggcatagagcctgaggat
atcgatggatgtccgcttggagctttaggtataccggagtttggtaccgattttgccatg
ggcatgctccttgatacaaagccaaaggagttttctgacctcattcgtatcgccggatta
tcacacggtaccgacgtatggcttggcaatgcacagactcttatcgaggaaggcacagct
accatttcaacctgtatctgtaccagagatgatattatgacatatctgatttccatggga
cttgaatctgaggaagccttcaacatcatggagaaagttcgaaagggcattattgccaag
ggcaaatgccctcagtggccacagtggaaggaggatatgaaagcacacggtgtgcctgac
tggtatatctggtcatgcgagaaaatcaagtacatgttccctaaggcccatgctgcggca
tacgttatgatggcatggagaatcgcatactgtaaggttttctatccgcttgcatactac
gcagcatacttttcaatccgtgccacaggcttttcatatgagcttatgtgtcagggaaag
gaccgactcgaaaactacatgaaggactataagaaaagaaaagacacgctgtcaaacaag
gagcaggatgtatttaaggacatgcgtatcgtacaggagatgtatgccagaggctttgat
ttcatgcctcttgatatatacagggctcaccctaaccgtttccagataattgacggtaag
ctcatgccggccataaacagcattgacggactgggcgacaatgccgctatttatatttcg
gaagcggcaaaagacggaccattcctctcaaaggatgatttcagggagagaactcatgta
tcgcgaacagccgtagacctcatgtcagatttgggactgcttggttcactgccggagtca
aaccagctttcacttttcgatttcggagcataa
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integrated database retrieval system
