Erysipelothrix piscisicarius: EEI45_05245
Help
Entry
EEI45_05245 CDS
T05733
Name
(GenBank) DEAD/DEAH box helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
eri
Erysipelothrix piscisicarius
Pathway
eri03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
eri00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EEI45_05245
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eri03019
]
EEI45_05245
Enzymes [BR:
eri01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
EEI45_05245
Messenger RNA biogenesis [BR:
eri03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
EEI45_05245
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_22
Flavi_DEAD
PhoH
CLN3
Motif
Other DBs
NCBI-ProteinID:
AZK44231
UniProt:
A0A3S8RMR1
LinkDB
All DBs
Position
1034797..1036227
Genome browser
AA seq
476 aa
AA seq
DB search
MEFKDLGINEKILQALTEQGYQKPTPIQEQAIPALLKHQDLIGLAQTGTGKTAAFAVPTL
QNLKQKAFDRNGKRKIRTLVLTPTRELAIQIQENFEMYGKYMDLRSTVIFGGVAQRYQVK
ALRNGVDILIATPGRLEDLMSQGYIDLSHIEIFILDEADRMLDMGFINDVKRIIKKLPKK
KQTLLFSATMPSEISSIAEMLLNHPTTVAVTPVSSTVETVDQSVYYVDQRNKTQLLIDVL
ENKSFDSVLVFTRTKRGADRVARDLCRSNINAVAIHGDKSQGARQRALSGFKDKTINVMV
ATDIAARGIDINELKYVVNYELPEVPETYVHRIGRTGRAGFSGSAISFCNFEEIPLLKDI
ERVIQMRVPVVKSHNYPLLDKTIKDGKISKKKKAKLERIKAEESKTKKKPTKQKDSKSKG
KPKKKEKELNGPYDWSNHASKKAKKQSQKAKKSNSSRLHDKNQEQKSTQRRKKSVR
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atggaatttaaagacttaggaataaatgaaaaaatactacaagcattaacggagcaggga
tatcaaaagccaactccaattcaagaacaagcaatccctgcattgcttaaacatcaagac
ctcattggacttgcgcaaaccggaaccggtaaaacggctgcttttgcggttcctacctta
caaaatttaaaacaaaaggcatttgaccgtaatgggaagcgtaaaataagaacgctcgtg
ttaacaccaacacgcgaacttgccatccaaattcaggaaaattttgaaatgtatggcaaa
tatatggatttacgatcaactgtgatctttggtggcgttgctcaacgttatcaagtaaaa
gcacttcgtaatggagtcgacattctgattgcaacaccgggtcgtttagaagatttaatg
agtcaaggttatatagacttatctcatattgagatttttattcttgatgaagcggatcgt
atgttggatatgggatttattaatgacgtgaaacgcatcattaaaaaacttcctaaaaag
aaacaaacacttcttttctcagctacaatgccatcagaaatttcaagtattgcggagatg
cttttaaatcatcccacaacggttgcggttacacccgtatcctcaactgttgaaacggta
gatcaaagtgtttattatgtcgatcagcgcaataagacacaacttctgattgatgttttg
gagaataagtcttttgattctgttcttgtgtttacgcgtacaaaacgtggtgcagaccgt
gtggcacgtgatttatgccgtagcaacatcaatgcagtcgcaattcacggagataaatca
caaggggcacgtcaacgtgctttgagtggttttaaagataaaaccattaatgttatggtg
gccacagatattgcggcgcgtggtattgatatcaatgaattgaaatatgtcgtaaactat
gaacttccagaagttcctgaaacttatgtacatcgaattggacgtacgggtcgtgcgggg
tttagtggatctgcgatttcgttttgtaattttgaagaaatcccattactaaaagatatt
gaacgtgtgattcaaatgcgtgttcctgtagtcaagtcacataactacccattgcttgat
aaaacaattaaagatgggaagattagtaaaaagaaaaaagcgaagttagaacgaataaaa
gctgaagaatccaaaactaagaaaaaaccaactaagcaaaaagactctaaatcaaaagga
aaacctaaaaaaaaagaaaaagaactcaatggaccctacgattggagtaatcatgcttca
aaaaaggcaaagaaacaatcacaaaaagcaaagaagtcgaacagttctcgtttgcacgat
aaaaaccaagagcagaagtcaacacagcgtcgtaaaaagtcagttcgataa
DBGET
integrated database retrieval system
