Encephalitozoon romaleae: EROM_080300
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Entry
EROM_080300 CDS
T03458
Name
(RefSeq) cleavage stimulation factor
KO
K14407
cleavage stimulation factor subunit 2
Organism
ero
Encephalitozoon romaleae
Pathway
ero03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ero00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
EROM_080300
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ero03019
]
EROM_080300
Messenger RNA biogenesis [BR:
ero03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
EROM_080300
U7-dependent histone pre-mRNA processing factors
EROM_080300
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
CSTF2_hinge
RRM_1
Motif
Other DBs
NCBI-GeneID:
20521766
NCBI-ProteinID:
XP_009264949
UniProt:
I7ASN6
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Position
VIII:complement(31557..32201)
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AA seq
214 aa
AA seq
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MKSGCSIFVGNIDFEVPEERIIEELGAVGRVVSFRMVYDKTTGKSRGFGFCEYESPLIVE
KALQNLKISFNGRPVKINYAENDMPAKTKEPDSQIPEIDNLINVLDGMDKDNLKEVLFYL
RKLALDQPSYLRELLNKNSSLVYAIIHAILKLKLADPGVVDEILKESFDLNKQKAQILER
ICTISEDDLCFFSEDVRSKIKKVRSMVLKSRVDK
NT seq
645 nt
NT seq
+upstream
nt +downstream
nt
atgaagagtgggtgtagtatttttgtcggaaacatagacttcgaggttccggaagaacgc
ataatagaggagcttggggcagtagggagggttgttagctttcgaatggtctatgataaa
acaacaggaaagtccagggggtttgggttctgtgaatacgaatccccattgatcgtagaa
aaagcgctgcagaacttgaagatatcatttaatggaagacctgtaaagataaactatgcc
gagaatgacatgccggcaaaaaccaaagagcccgacagccaaatcccagaaatcgataat
ttgatcaatgtactggatggcatggataaggataatctcaaggaggttctcttttacttg
aggaagctggcattggatcaaccatcatatctaagggagcttttaaataaaaattcgagc
cttgtttatgcaataatccatgccatactcaaacttaagctagctgaccccggggttgtg
gatgagatcttgaaagagtccttcgatctcaataagcagaaggcacagattctagaaaga
atatgtacaatctctgaggatgatttatgttttttctcagaggatgtaagaagcaaaatc
aagaaagtgagaagcatggtcctaaagtccagagtagataagtaa
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