Agathobacter rectalis DSM 17629: EUR_23430
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Entry
EUR_23430 CDS
T02587
Name
(GenBank) Superfamily I DNA and RNA helicases
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ert
Agathobacter rectalis DSM 17629
Pathway
ert03420
Nucleotide excision repair
ert03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ert00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
EUR_23430
03430 Mismatch repair
EUR_23430
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ert03400
]
EUR_23430
Enzymes [BR:
ert01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
EUR_23430
DNA repair and recombination proteins [BR:
ert03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
EUR_23430
MMR (mismatch excision repair)
Other MMR factors
EUR_23430
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
Viral_helicase1
Homoserine_dh
CarD_TRCF_RID
Unstab_antitox
Motif
Other DBs
NCBI-ProteinID:
CBK91335
LinkDB
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Position
2413834..2416125
Genome browser
AA seq
763 aa
AA seq
DB search
MNLDMLNEQQREAVLTTDGPLLILAGAGSGKTRVLTYRTAYLIDECGVNPYNIMAITFTN
KAAGEMRERIDDMVGYGSESIWVSTFHSTCVRILRRYIDRLGYDTNFTIYDADDQKALMK
DICKRLEIDTKMYKEKMFLNVISSAKDEMIDPIEFENRFTGDFVKRKQALVYKEYQNALK
QNNALDFDDLLVKTVELFKLDKEVLDYYQERFRYIMVDEYQDTNTVQFELIRLLAMKYKN
LCVVGDDDQSIYKFRGANIYNILNFEKHFEDAKVIKLEQNYRSTQNILDAANSVISNNVG
RKDKRLWTDNGAGDRITFEQLESGFEEADYVARSIARLVRKGEARYKDCAVLYRTNAQSR
LFEEKFIAANIPYKIVGGVNFYARKEIKDILAYLKTIDNGHDDLAVKRIINVPKRGIGAT
SINKVTDYALEKGIDFYTALRYVDEVSGMARSAGKIKPFVMFIQSLRARAEMDSVSQLIQ
AIIDETGYVDELKAEGTDEAEQRIENIDELINKAVDYEQGEENPTLSGFLEEVALVADID
GLDENSDYVVLMTLHSAKGLEFPNVYLAGMEDGLFPSYMSITSDDATSEIEEERRLAYVG
ITRAKEHLTITSARMRMVRGETQFNKVSRFVKEIPRELMAGEVYEPKRRDDDIERNSQST
YRKAKEAFKKTPTYGTEYATTFNTQRTRTPVYTPVSNQKSFASANTTGGLSYKVGDRVSH
IKFGAGEVMAIVEGGRDYEVTVDFDKAGTKKMFASFAKLKKID
NT seq
2292 nt
NT seq
+upstream
nt +downstream
nt
atgaacttagatatgttgaatgaacagcagagggaggccgttttgaccacagatggaccg
cttcttattttagcgggggcaggcagtggcaagaccagggttcttacatacaggactgcc
tacctgatagatgagtgtggcgtcaatccttacaatatcatggcaatcacctttacaaac
aaggctgcgggagagatgcgtgagcgaattgatgatatggtgggctatggttcggaaagc
atatgggtttctacattccattcgacatgtgtgcgtatactgcgcaggtatattgacagg
ctgggatatgacacgaattttaccatatatgatgctgacgaccagaaggctctgatgaag
gacatctgcaagcgtcttgagatagataccaagatgtataaggaaaagatgtttttaaat
gtcatttcatctgcaaaggatgagatgattgatccgatagagtttgaaaaccgcttcaca
ggtgacttcgtgaagcgtaagcaggcacttgtatacaaggagtatcagaatgccctaaag
cagaataacgcactcgattttgatgatttgcttgtgaagacagtagagctttttaagctg
gataaagaggtgctggattactatcaggagcgcttcagatatatcatggtggatgagtat
caggatacaaacaccgtgcagtttgagcttatcaggcttcttgccatgaagtataagaat
ctgtgtgtggtgggtgatgatgatcagtccatttacaagttcagaggtgccaatatctac
aatatcttaaactttgagaagcattttgaggatgcaaaggtcataaagcttgagcagaat
tacaggtctacccagaatatcctagatgccgccaacagcgtcatttccaacaacgtgggt
agaaaggacaagcgcctttggactgacaacggggccggagacaggattacatttgaacag
cttgagagtggcttcgaggaagcggattatgtggcgcgttcgatagcgagactcgtgaga
aagggtgaggcgcgctataaggactgtgctgtgctttaccgaaccaacgcacagtcgcgt
cttttcgaggagaaatttattgctgccaacatcccatacaagattgtcggcggcgtgaat
ttctatgccagaaaagagataaaggatattcttgcatatttaaagactattgacaatggc
catgatgaccttgcggtaaagcgaataataaatgtgccaaagcgcggcatcggagctacg
agcatcaataaggtgacagattatgctcttgagaaggggatagatttctatacggcactg
cgctatgtcgatgaggtgtctggcatggcgaggtcagcaggcaagataaagccttttgtg
atgtttatacagtcacttcgtgcgagagccgagatggattcggtttcgcagctcatacag
gctataatcgatgagaccggctatgtcgatgagctgaaggcagagggcacggatgaagca
gagcagcgtattgagaatattgatgagcttataaacaaggctgttgattacgagcagggg
gaggagaatcctactctcagtggctttttggaggaggtagcgcttgtagccgatatagac
ggtcttgacgaaaacagcgactatgtggttcttatgactctgcacagtgctaagggactt
gaatttccgaatgtgtatctggcgggtatggaggatggtcttttcccaagctatatgtca
atcacgagtgatgatgcgacaagcgagatagaggaggaaaggcgtcttgcttatgttggc
atcacgagagccaaggagcatctgaccatcacatctgcacgtatgcgcatggtgcgtgga
gagacacagttcaacaaggtatcgcgatttgtgaaggagattccgcgtgagcttatggca
ggcgaggtttatgagccaaagcgccgtgatgatgacattgaaagaaattcgcagagcacg
tacagaaaggctaaggaggccttcaaaaagacacctacatacggcacagagtatgcgacc
acctttaatacacagcgtacaaggacacctgtatatacacctgtgagcaaccagaagtca
tttgccagtgccaataccaccggcggcctttcatataaggtaggagacagagtatcgcac
atcaagtttggtgcgggcgaggtcatggcaattgtagaaggcggcagggattatgaggtc
actgtggactttgacaaggccggtaccaaaaagatgtttgcttcatttgccaaattgaaa
aaaattgactaa
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