Agathobacter rectalis DSM 17629: EUR_24850
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Entry
EUR_24850 CDS
T02587
Name
(GenBank) excinuclease ABC, A subunit
KO
K03701
excinuclease ABC subunit A
Organism
ert
Agathobacter rectalis DSM 17629
Pathway
ert03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ert00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
EUR_24850
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ert03400
]
EUR_24850
DNA repair and recombination proteins [BR:
ert03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
EUR_24850
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
EUR_24850
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_21
AAA_29
AAA_16
RsgA_GTPase
nSTAND1
APS_kinase
AAA_18
DnaJ_CXXCXGXG
Motif
Other DBs
NCBI-ProteinID:
CBK91463
LinkDB
All DBs
Position
2553667..2556519
Genome browser
AA seq
950 aa
AA seq
DB search
MAKKERKYIKIRGASEHNLKCVSLDIPRDEFVVFTGLSGSGKSSLAFDTIYAEGQRRYME
SLSSYARQFLGQMEKPNVESIEGLPPAISIDQKSTNKNPRSTVGTVTEIYDYFRLLYARI
GIPHCPKCGRAITKQTIDQMVDTVMALPERTRIQLLAPVVRGRKGEHQKLFERAKKSGYV
RVIVDGSMYELSEDIPMEKNIKHNIDIVVDRLVVKPGIEKRLTDSLENVFELTEGNAIVD
IVDGEQMTFSQNFACPDCGISIDEVEPRSFSFNNPFGACPTCYGLGYKMEFDPQLMVPDS
SLSISEGAIQVMGWQSCTDPKSYTYATLRALHEGYGLPLDTPIDDLSADMKKLLFYGGDG
RVLKVRYKGQRGEGVYDLVWNGLVDNVERRYKETFSDTAKAEYEQFMRITPCTSCKGQRL
KPSSLAVTVADKNIYEMTSMSVKELVKFLADIELTEQQHYIGDQILKEIRARVGFLQQVG
LDYLTLTRGTASLSGGEAQRIRLATQIGSGLVGVAYILDEPSIGLHQRDNDKLLGALMNL
KNLGNTLIVVEHDEDTMRAADYIVDVGPGAGSHGGEIVAAGSLKDIIKCKKSLTGAYLSG
KIKIPVPQERRKPSGYITIRGARENNLKNIDVQIPLGIMTCVTGVSGSGKSSLTNEILYK
HLAKSLNRARCIAGDHDGIDGLEQLDKVIDIDQSPIGRTPRSNPATYTGVFDMIRDLFAS
TPDAKAKGYKKGRFSFNVKGGRCEACGGDGILKIEMHFLPDVYVPCEVCGGKRYNRETLD
VKYKGKSIYDVLDMTVEEALEFFKNVPKIQNKIQSLYDVGLSYVKLGQPSTELSGGEAQR
IKLATELSRKSTGKTIYILDEPTTGLHFADVHKLVEILRRLSDGGNTVVVIEHNLDVIKT
ADYIIDMGPEGGDGGGTVIAQGIPEEICEVKQSYTGRFLKPYLEKDKDKL
NT seq
2853 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaaaaagaaagaaaatacatcaaaatacgaggtgccagcgaacacaatctaaag
tgcgtcagtctcgacatcccgagagatgagtttgttgtttttacagggctttcaggctcc
ggcaagtcatcactggcatttgataccatatatgctgaggggcagcgcaggtacatggag
tcactttcatcgtatgcacgtcagtttttaggacagatggagaagccgaatgtggagtct
atagagggacttccgcctgccatttccattgaccagaaatccaccaacaagaacccacgt
tcaactgtcggaacggtcacagagatatatgattacttcagactgctttatgccagaatt
ggaataccacactgtccgaagtgcgggcgtgccattacaaagcagacgatagaccagatg
gtggatactgttatggcactgcctgagcgcactcgtatccagcttcttgcaccggtggtc
agaggccgcaagggcgagcaccagaagctgttcgagagagccaaaaagagcggatacgtg
cgtgtgattgtagatggcagcatgtatgagctctctgaggatatcccgatggagaaaaat
ataaagcacaatattgatattgttgtagaccgtctggttgtaaagccgggcatagagaag
aggcttactgattcacttgaaaatgtatttgaactgacagagggcaatgccatagttgat
attgtggatggcgaacagatgaccttttcccagaattttgcgtgccctgactgtggcata
agcatagatgaggttgagccgagaagcttctccttcaataatccgttcggagcatgtccg
acctgctacggactcggctacaagatggagtttgacccgcagcttatggtgccagactca
tcgctttccatatctgagggcgccatacaggtgatgggctggcagtcatgtacagaccca
aagagctatacctatgcgacacttcgtgcgctgcatgagggctatgggcttcctctcgac
acaccgattgatgatttatctgcagatatgaaaaaactgcttttttacggtggagacggc
agagtgctcaaggtcagatacaaggggcagagaggcgaaggcgtctatgaccttgtatgg
aacggccttgtggacaatgttgagcgccgatacaaggagaccttttctgatacggcaaag
gcagagtatgagcagtttatgcgcattactccgtgtacgagctgtaaggggcagaggctt
aagccgtcgtcacttgccgttacggttgcggacaagaacatatatgagatgacctccatg
tctgtgaaggagcttgtgaagttccttgctgatatagagcttacagagcagcagcactat
ataggagaccagatactaaaggaaatccgtgcgagggttggctttttgcagcaggtcggc
cttgattatctcactcttacccgtggcacggcaagcctttcaggcggggaagcccagcga
atcaggcttgccacgcagataggctcaggacttgtaggtgtggcatatatacttgatgag
ccgagcattggcttacatcagagggataacgacaagctgcttggtgcacttatgaatctt
aagaatctgggaaatacgctcatagttgtggagcatgatgaggataccatgcgtgcagcg
gattatatcgtggatgtaggaccgggagccggttcacacggcggagagatagtggcggca
ggctcgttaaaggacattataaagtgcaaaaaatcactcacaggagcatatctgagcggt
aaaataaagataccggtgccacaggagaggcgcaagccaagcggatatatcacgataaga
ggagccagggagaataacctgaaaaatattgatgtgcagatacctcttggtatcatgacc
tgtgttacaggcgtgtcgggctcgggaaagagctcattgaccaatgagatactctacaag
catctggccaaatccttaaacagagccaggtgtatcgcaggtgaccacgacggtatagat
ggtcttgaacagcttgacaaggtcatagacatcgaccagtcaccgataggccgtacaccc
cgctctaatcctgccacatatacaggtgtgtttgacatgataagagacctgtttgcatca
acacctgatgccaaggcaaagggctataaaaagggccgtttcagtttcaatgtaaagggc
ggtcggtgtgaggcctgcggcggcgatggaattcttaagatagagatgcatttcctgcct
gatgtatatgtgccgtgtgaggtctgtggaggcaaacgatataacagggagacactcgat
gtaaagtacaagggcaagagtatatacgatgtccttgatatgacagtggaggaggcactt
gagtttttcaaaaatgtgccaaagatccagaacaaaatccagtcgctgtatgatgtcgga
ctatcctacgtgaagctcggacagccgtccacagagctttcaggtggtgaggcacagcgt
atcaagcttgccacagagcttagcagaaagagcaccggaaagaccatatatatacttgat
gagcctaccacgggactgcactttgcagatgtacacaagcttgtggagatattgcgcagg
ctctcagacggaggcaatactgtagttgttatcgagcacaacctcgacgtgataaagacg
gctgactatatcatagatatgggacctgagggcggagacggcggcggaaccgtcatagcg
cagggcatacctgaggagatatgcgaggtaaaacagtcatatacaggccggtttttgaaa
ccatatctggaaaaagacaaggataaactttaa
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