Erwinia sorbitola: GN242_00020
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Entry
GN242_00020 CDS
T06366
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
erwi
Erwinia sorbitola
Brite
KEGG Orthology (KO) [BR:
erwi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
erwi03032
]
GN242_00020 (gyrB)
03400 DNA repair and recombination proteins [BR:
erwi03400
]
GN242_00020 (gyrB)
Enzymes [BR:
erwi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
GN242_00020 (gyrB)
DNA replication proteins [BR:
erwi03032
]
Prokaryotic type
DNA Topoisomerases
GN242_00020 (gyrB)
DNA repair and recombination proteins [BR:
erwi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
GN242_00020 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
GyrB_insert
DNA_gyraseB_C
GyrB_hook
Toprim
HATPase_c
HATPase_c_3
Spindle_Spc25
DUF6865
Motif
Other DBs
NCBI-ProteinID:
QGU85698
UniProt:
A0A6I6EAE3
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All DBs
Position
4092..6500
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AA seq
802 aa
AA seq
DB search
MSNSYDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDNAIDEALAGHCSDIV
VTIHADNSVSVQDDGRGIPTGIHEEEGISAAEVIMTVLHAGGKFDDNSYKVSGGLHGVGV
SVVNALSEKLELTIRRDGKVHQQIYVHGVPQAPLAVSGETELTGTRVRFWPSHQTFTNVR
EFEYEILAKRLRELSFLNSGVSIRLEDKRDGKSDHYHYEGGIKAFVEYLNKNKTPIHPNV
FYFSTEKDGIGVEVALQWNDGFQENIYCFTNNIPQRDGGTHLVGFRTAMTRTLNAYMDKE
GYSKKAKVSATGDDAREGLIAVVSVKVPDPKFSSQTKDKLVSSEVKTAVEQQMNERLAEY
LLEHPGDAKIVVGKIIDAARAREAARRAREMTRRKGALDLAGLPGKLADCQERDPALSEI
YLVEGDSAGGSAKQGRNRKNQAILPLKGKILNVEKARFDKMLASQEVATLITALGCGIGR
DEYNPDKLRYHSIIIMTDADVDGSHIRTLLLTFFYRQMPEIIERGHVYIAQPPLYKVKKG
KQEQYIKDDDAMDQYQISIALDGATLHANASAPALGGKPLEDLVSEFNSTRKMIKRMERR
YPVALLNALIYHPTLTELAAEAPVQEWMDGLVKYLNDNDQHGSSYSGLVRENRELHIFEP
VLRIRTHGVDTDYALDTDFMLGGEYRKICGLGESLRGLIEEDAFIERGERRQPIDSFEQA
MEWLVKESRRGLTVQRYKGLGEMNPDQLWETTMDPDSRRMLRVTIRDAVAADQLFTTLMG
DAVEPRRAFIEENALRAANIDI
NT seq
2409 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaattcttatgactcttccagtatcaaagttctcaaggggctggatgcggtacgc
aagcgcccgggtatgtatatcggcgatacggatgacggtaccggtctgcatcacatggta
tttgaggtcgtggataacgccattgacgaagcactcgccggtcactgctccgatattgtt
gtcactattcatgcagataactctgtgtcagtacaggatgacggacgcggtattccaacc
ggtatccatgaagaagaaggcatttctgccgctgaagtaatcatgaccgtgctgcatgcg
ggcggtaaattcgacgataactcgtataaagtttccggcggcctgcacggcgttggtgtt
tccgtggttaacgccctgtcggaaaagctggaactgactattcgtcgtgatggtaaagta
catcagcagatctacgttcacggcgtgcctcaggccccgctggcggttagcggtgaaacc
gagctgaccggtacacgcgtgcgtttctggccaagccatcagacctttaccaatgtcaga
gagtttgagtacgaaattctggcaaagcgcctgcgtgagctgtcattcctgaactctggt
gtttccatcagactggaagataagcgcgatggtaaaagcgaccactaccactatgaaggt
ggtatcaaagcgtttgttgagtatctgaataagaacaaaaccccgatccacccgaatgtg
ttctatttctccactgagaaagacggcattggtgtggaagtggcgcttcagtggaacgat
ggtttccaggaaaacatctactgctttaccaacaacattcctcagcgtgatggtggtact
cacctcgtcggtttccgtaccgcgatgacccgtaccctgaatgcttatatggacaaagaa
ggctacagcaaaaaagccaaagtcagcgccaccggtgacgatgcgcgcgaaggcctgatt
gctgttgtctcagtgaaagttccggatccgaagttctcctcacagaccaaagacaaactg
gtctcttctgaggtgaaaacggcggttgagcagcagatgaacgaacgactggctgagtat
ctgctggaacatccgggcgatgccaaaatcgttgtgggtaagatcattgatgcagcccgt
gcccgtgaagcggcgcgtcgcgcacgtgaaatgacccgtcgtaaaggtgcgctggatctg
gctggcctgccaggtaaactggctgactgtcaggaacgcgacccggcactctctgaaatc
tacctggtggaaggggactctgcgggcggctctgccaagcaggggcgtaaccgtaaaaac
caggcaatcctgccgctgaaaggtaaaatccttaacgtggagaaagcgcgcttcgacaag
atgcttgcttcgcaggaagtggcaacgcttatcaccgcgctgggctgcggcattggccgt
gacgaatacaacccggacaaactgcgttatcacagcatcatcatcatgaccgatgcggac
gtcgatggttcgcatatccgtacgctgctgctgaccttcttctatcgtcagatgccagaa
atcatcgaacgcggccatgtgtatatcgcacagccgccgctgtataaggtgaaaaaaggt
aagcaggagcagtacatcaaagatgatgacgcaatggatcagtaccagatctccatcgca
cttgatggtgcgacgctgcacgctaacgccagcgctccggcactgggcggtaagccgctg
gaagacctggtatcagagttcaacagcacgcgtaagatgatcaaacgtatggagcgccgt
tatccggtcgccctgctgaatgcgctgatctaccatccgacgctgactgaactggccgct
gaagcgccggtgcaggagtggatggacgggctggtgaaatatcttaacgacaacgaccag
cacggcagcagctacagcggtctggtacgtgaaaaccgcgaactgcacatttttgagcca
gtgctgcgcatccgtactcacggtgtggataccgattacgcgctggatactgattttatg
ctcggcggcgaataccgtaaaatctgtggcctgggtgaaagcctgcgtggtctgatcgaa
gaagatgcgtttatcgaacgtggcgaacgtcgccagccgattgacagcttcgagcaggca
atggagtggctggtgaaagagtcacgccgtggtctgacggttcagcgctataaaggactg
ggcgaaatgaacccggatcagctgtgggaaaccaccatggatccggacagtcgtcgtatg
ctgcgcgttaccattcgtgatgcagtcgctgctgaccagctgttcactaccctgatgggc
gatgcggtggaaccacgccgtgcctttatcgaagagaacgccctgcgcgcggcgaacatc
gatatttaa
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