KEGG   Erwinia sorbitola: GN242_00020
Entry
GN242_00020       CDS       T06366                                 
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
  KO
K02470  DNA gyrase subunit B [EC:5.6.2.2]
Organism
erwi  Erwinia sorbitola
Brite
KEGG Orthology (KO) [BR:erwi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:erwi03032]
    GN242_00020 (gyrB)
   03400 DNA repair and recombination proteins [BR:erwi03400]
    GN242_00020 (gyrB)
Enzymes [BR:erwi01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     GN242_00020 (gyrB)
DNA replication proteins [BR:erwi03032]
 Prokaryotic type
  DNA Topoisomerases
   GN242_00020 (gyrB)
DNA repair and recombination proteins [BR:erwi03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      GN242_00020 (gyrB)
SSDB
Motif
Pfam: DNA_gyraseB GyrB_insert DNA_gyraseB_C GyrB_hook Toprim HATPase_c HATPase_c_3 Spindle_Spc25 DUF6865
Other DBs
NCBI-ProteinID: QGU85698
UniProt: A0A6I6EAE3
LinkDB
Position
4092..6500
AA seq 802 aa
MSNSYDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDNAIDEALAGHCSDIV
VTIHADNSVSVQDDGRGIPTGIHEEEGISAAEVIMTVLHAGGKFDDNSYKVSGGLHGVGV
SVVNALSEKLELTIRRDGKVHQQIYVHGVPQAPLAVSGETELTGTRVRFWPSHQTFTNVR
EFEYEILAKRLRELSFLNSGVSIRLEDKRDGKSDHYHYEGGIKAFVEYLNKNKTPIHPNV
FYFSTEKDGIGVEVALQWNDGFQENIYCFTNNIPQRDGGTHLVGFRTAMTRTLNAYMDKE
GYSKKAKVSATGDDAREGLIAVVSVKVPDPKFSSQTKDKLVSSEVKTAVEQQMNERLAEY
LLEHPGDAKIVVGKIIDAARAREAARRAREMTRRKGALDLAGLPGKLADCQERDPALSEI
YLVEGDSAGGSAKQGRNRKNQAILPLKGKILNVEKARFDKMLASQEVATLITALGCGIGR
DEYNPDKLRYHSIIIMTDADVDGSHIRTLLLTFFYRQMPEIIERGHVYIAQPPLYKVKKG
KQEQYIKDDDAMDQYQISIALDGATLHANASAPALGGKPLEDLVSEFNSTRKMIKRMERR
YPVALLNALIYHPTLTELAAEAPVQEWMDGLVKYLNDNDQHGSSYSGLVRENRELHIFEP
VLRIRTHGVDTDYALDTDFMLGGEYRKICGLGESLRGLIEEDAFIERGERRQPIDSFEQA
MEWLVKESRRGLTVQRYKGLGEMNPDQLWETTMDPDSRRMLRVTIRDAVAADQLFTTLMG
DAVEPRRAFIEENALRAANIDI
NT seq 2409 nt   +upstreamnt  +downstreamnt
atgtcgaattcttatgactcttccagtatcaaagttctcaaggggctggatgcggtacgc
aagcgcccgggtatgtatatcggcgatacggatgacggtaccggtctgcatcacatggta
tttgaggtcgtggataacgccattgacgaagcactcgccggtcactgctccgatattgtt
gtcactattcatgcagataactctgtgtcagtacaggatgacggacgcggtattccaacc
ggtatccatgaagaagaaggcatttctgccgctgaagtaatcatgaccgtgctgcatgcg
ggcggtaaattcgacgataactcgtataaagtttccggcggcctgcacggcgttggtgtt
tccgtggttaacgccctgtcggaaaagctggaactgactattcgtcgtgatggtaaagta
catcagcagatctacgttcacggcgtgcctcaggccccgctggcggttagcggtgaaacc
gagctgaccggtacacgcgtgcgtttctggccaagccatcagacctttaccaatgtcaga
gagtttgagtacgaaattctggcaaagcgcctgcgtgagctgtcattcctgaactctggt
gtttccatcagactggaagataagcgcgatggtaaaagcgaccactaccactatgaaggt
ggtatcaaagcgtttgttgagtatctgaataagaacaaaaccccgatccacccgaatgtg
ttctatttctccactgagaaagacggcattggtgtggaagtggcgcttcagtggaacgat
ggtttccaggaaaacatctactgctttaccaacaacattcctcagcgtgatggtggtact
cacctcgtcggtttccgtaccgcgatgacccgtaccctgaatgcttatatggacaaagaa
ggctacagcaaaaaagccaaagtcagcgccaccggtgacgatgcgcgcgaaggcctgatt
gctgttgtctcagtgaaagttccggatccgaagttctcctcacagaccaaagacaaactg
gtctcttctgaggtgaaaacggcggttgagcagcagatgaacgaacgactggctgagtat
ctgctggaacatccgggcgatgccaaaatcgttgtgggtaagatcattgatgcagcccgt
gcccgtgaagcggcgcgtcgcgcacgtgaaatgacccgtcgtaaaggtgcgctggatctg
gctggcctgccaggtaaactggctgactgtcaggaacgcgacccggcactctctgaaatc
tacctggtggaaggggactctgcgggcggctctgccaagcaggggcgtaaccgtaaaaac
caggcaatcctgccgctgaaaggtaaaatccttaacgtggagaaagcgcgcttcgacaag
atgcttgcttcgcaggaagtggcaacgcttatcaccgcgctgggctgcggcattggccgt
gacgaatacaacccggacaaactgcgttatcacagcatcatcatcatgaccgatgcggac
gtcgatggttcgcatatccgtacgctgctgctgaccttcttctatcgtcagatgccagaa
atcatcgaacgcggccatgtgtatatcgcacagccgccgctgtataaggtgaaaaaaggt
aagcaggagcagtacatcaaagatgatgacgcaatggatcagtaccagatctccatcgca
cttgatggtgcgacgctgcacgctaacgccagcgctccggcactgggcggtaagccgctg
gaagacctggtatcagagttcaacagcacgcgtaagatgatcaaacgtatggagcgccgt
tatccggtcgccctgctgaatgcgctgatctaccatccgacgctgactgaactggccgct
gaagcgccggtgcaggagtggatggacgggctggtgaaatatcttaacgacaacgaccag
cacggcagcagctacagcggtctggtacgtgaaaaccgcgaactgcacatttttgagcca
gtgctgcgcatccgtactcacggtgtggataccgattacgcgctggatactgattttatg
ctcggcggcgaataccgtaaaatctgtggcctgggtgaaagcctgcgtggtctgatcgaa
gaagatgcgtttatcgaacgtggcgaacgtcgccagccgattgacagcttcgagcaggca
atggagtggctggtgaaagagtcacgccgtggtctgacggttcagcgctataaaggactg
ggcgaaatgaacccggatcagctgtgggaaaccaccatggatccggacagtcgtcgtatg
ctgcgcgttaccattcgtgatgcagtcgctgctgaccagctgttcactaccctgatgggc
gatgcggtggaaccacgccgtgcctttatcgaagagaacgccctgcgcgcggcgaacatc
gatatttaa

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