KEGG   Erythrobacter sp. s21-N3: CP97_14928Help
Entry
CP97_14928        CDS       T03997                                 

Definition
(GenBank) hypothetical protein
  KO
K01971  bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
Organism
ery  Erythrobacter sp. s21-N3
Pathway
ery03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:ery00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    CP97_14928
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ery03400]
    CP97_14928
Enzymes [BR:ery01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     CP97_14928
DNA repair and recombination proteins [BR:ery03400]
 Prokaryotic Type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     CP97_14928
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: LigD_N DNA_ligase_A_M DNA_ligase_A_C DNA_primase_S
Motif
Other DBs
NCBI-ProteinID: ANC50617
UniProt: A0A160HUG2
LinkDB All DBs
Position
unnamed:65517..68036
Genome map
AA seq 839 aa AA seqDB search
MSPPADPLSEYNARRDFAKTPEPAGKAMKGGGGNLFIVQKHDATRLHWDLRLEFDGVLKS
WAVTKGPSPDPDVKRLAVRTEDHPMSYAEFEGTIPKGEYGGGTVMLWDRGTWSPVEGKSA
RDLDKGHLHFRLEGERMRGEWLLIRLKPRGNEKRENWLLRKLQDEHAETGDALVERELTS
VLTGRSMAEIAADKGGEFPLAGKKDDAFLAQMAKASAHNTRKAKARRKPKDAPLPKFRKP
QLATLVDQVPTGNGWMHEIKFDGYRALVAAKGKQVRVHTRRGKDWTDKFGPLVDAVAALD
LPSCLIDGEIVAVDAKGNPDFSTLQGMLKRGHGSQSQGDALQFHAFDLLELAGEDLAALP
NIERKERLEALLGTAEPPVFVADHVIGAGEKLYRSMCDAGQEGIISKTVDGRYSGRRGRS
WVKAKCTRRQEFVIIGWKASSAKRRPFSSLLMAQHEGGELVYKGNVGTGFSSDDLDALAA
KLKRIERKTPPAEVDKASSRGVTWVTPQLVAEVAFSEFTGDGNIRHGSYLGLRGDKQASE
VRPERAAAAPAPKGEVKISSRDRVIFPDSGQTKGALADYYTAIAPAMLPFAANRPLSLVR
CPQGRAKKCFFQKHDSGAFGDAVQHVPITEKNGGTEDYLYIENVRGILQCVQMGTIEFHG
WGVRSSNVEAPDRMVFDLDPDEGLDFGDVKQAARDIRDRLSDMGLVSFAMLSGGKGVHVV
VPLTPDHSWEAHKDFARRFAEALSMAEPERFTATMSKAKRKGKIFIDWLRNQRGSTAVVP
YSARARSGATVAVPIGWNELKDMADAHPFSIDDSKLLGDRAESKTLAGWGFAEQSLPDV
NT seq 2520 nt NT seq  +upstreamnt  +downstreamnt
atgagcccgcctgccgatccactttccgaatacaatgcccgtcgcgacttcgcgaagacg
cccgagccggccggcaaggcgatgaaaggtggcgggggcaacctctttatcgtgcaaaag
cacgatgccacccggcttcactgggacttgcggctggaattcgatggcgtgctcaagagc
tgggccgtcaccaaggggccttccccggatcccgacgtcaagcggctggcggtccgcacc
gaggatcatcctatgtcctatgccgagttcgagggcacgatccccaagggtgaatacggc
ggcggcacggtcatgctgtgggatcgcggcacctggtcgccggtcgaaggcaagagcgcg
agggatctggacaaggggcatctccactttcgcctcgaaggcgagagaatgcgcggcgaa
tggctgctgatccgattgaagccgcgcggcaatgagaagcgcgagaactggctcctgcgc
aagctgcaggacgagcatgccgaaacgggcgacgcgctggtggagcgcgaactcaccagc
gtcctcacgggccggtcgatggcggaaatcgcagctgacaaaggcggcgagtttccgctg
gccggcaagaaggacgatgcgttcctcgcgcaaatggccaaggcttcggctcacaatacc
aggaaggcgaaggcgcgccggaagccaaaggacgcgccgctgccgaagtttcgcaagccg
caactggcgacgctggtcgaccaggtgccgaccggcaatggctggatgcacgagatcaag
ttcgacggctaccgcgccttggtcgccgcaaagggaaagcaggtgcgcgtccatacccgc
cgcggcaaggactggaccgacaagttcggccccctcgtcgatgccgttgctgcattagat
ttgcccagctgcctgatcgacggggaaatcgtggcggtggatgccaagggcaatcccgat
ttttcaaccctgcaaggtatgctcaagcgcggccatggcagccagtcgcagggtgatgca
ctgcagttccacgccttcgacctgctggaactggcgggagaggatctggccgccctgccc
aatatcgagcgcaaggaacggctcgaggcgctgctcggcacggcagagccaccggtgttc
gtggccgatcacgtgatcggtgcaggcgagaagctgtaccgttcgatgtgcgacgccggc
caggaaggcatcatctccaagacggtcgacgggcgctattctgggcggcgcgggcgcagc
tgggtgaaagcgaaatgtacccggcggcaagagttcgtcatcatcggctggaaggcttca
agcgcgaagagacgaccgttctcctcgctgctgatggcgcagcacgagggaggcgaactg
gtctataagggcaatgtcggcaccggcttttccagtgacgacctcgacgcgctggcggca
aagctgaagcggatcgagcgcaagaccccgccggccgaagtcgacaaggcaagcagccgg
ggcgtgacctgggtgacgccgcaactcgtcgccgaggtggccttctccgaatttaccggg
gacggcaatatccggcacggcagttacctcgggctgcgcggcgacaagcaggcgagcgaa
gtaaggccagagcgcgctgcagcggcgcccgcaccaaaaggcgaggtgaagatcagtagc
cgggacagggtgatctttcccgacagcggccagaccaagggcgcgctggcggactattac
accgctatcgcccctgccatgctgcccttcgccgccaaccgcccgctcagcctggtgcgc
tgcccgcaggggcgggcgaagaagtgctttttccagaagcacgacagcggtgctttcggc
gatgcagtgcagcatgttcccatcacggaaaagaacggcgggaccgaggattatctctat
atcgaaaacgtccgcggcatcctgcaatgcgtacagatgggcacgatagagtttcacggc
tggggcgtccgaagtagcaatgtagaagcgcccgaccggatggtcttcgaccttgacccc
gatgaggggctcgacttcggcgacgtcaagcaagccgcgcgcgacatccgcgatcggctc
tccgacatgggactggtcagcttcgccatgctgtcgggaggcaagggcgtgcacgtggtc
gtcccgctcactcccgaccactcgtgggaagcgcacaaggacttcgcccgccgcttcgcc
gaagccctgagcatggccgagcccgagcggttcactgcaaccatgagcaaggccaagcgc
aaggggaagatttttatcgactggctgcgcaatcagcgcggcagcacggcggtggtgccc
tattctgctcgtgcccgcagcggcgccaccgtggctgttccgatcggctggaatgagctc
aaggacatggccgacgcccaccccttcagcatcgatgattccaaacttttgggcgatcgc
gcagagagcaagaccttggccggctggggctttgccgagcaatccctgcccgacgtatga

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